data_5F6X # _model_server_result.job_id hSQVfLz6PbrhPeSHsFxedQ _model_server_result.datetime_utc '2024-10-28 02:28:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f6x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5F6X # _exptl.entry_id 5F6X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 185.631 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-chloranyl-3~{H}-1,3-benzoxazole-2-thione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.64 _cell.angle_gamma 90 _cell.entry_id 5F6X _cell.length_a 50.48 _cell.length_b 35.558 _cell.length_c 58.11 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F6X _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H4 Cl N O S' _chem_comp.formula_weight 185.631 _chem_comp.id 5VM _chem_comp.mon_nstd_flag . _chem_comp.name 5-chloranyl-3~{H}-1,3-benzoxazole-2-thione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CLB CAH 5VM sing 1 n n CAE CAH 5VM doub 2 n y CAE CAJ 5VM sing 3 n y NAF CAJ 5VM sing 4 n n NAF CAI 5VM sing 5 n n CAH CAC 5VM sing 6 n y CAJ CAK 5VM doub 7 n y CAI SAA 5VM doub 8 n n CAI OAG 5VM sing 9 n n CAC CAD 5VM doub 10 n y CAK OAG 5VM sing 11 n n CAK CAD 5VM sing 12 n y CAD H1 5VM sing 13 n n CAC H2 5VM sing 14 n n CAE H3 5VM sing 15 n n NAF H4 5VM sing 16 n n # _atom_sites.entry_id 5F6X _atom_sites.fract_transf_matrix[1][1] 0.01981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007861 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018514 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5VM A 1 201 1 5VM DRG . C 3 HOH A 1 301 270 HOH HOH . C 3 HOH A 2 302 235 HOH HOH . C 3 HOH A 3 303 204 HOH HOH . C 3 HOH A 4 304 228 HOH HOH . C 3 HOH A 5 305 226 HOH HOH . C 3 HOH A 6 306 91 HOH HOH . C 3 HOH A 7 307 104 HOH HOH . C 3 HOH A 8 308 215 HOH HOH . C 3 HOH A 9 309 208 HOH HOH . C 3 HOH A 10 310 186 HOH HOH . C 3 HOH A 11 311 185 HOH HOH . C 3 HOH A 12 312 21 HOH HOH . C 3 HOH A 13 313 30 HOH HOH . C 3 HOH A 14 314 111 HOH HOH . C 3 HOH A 15 315 198 HOH HOH . C 3 HOH A 16 316 229 HOH HOH . C 3 HOH A 17 317 92 HOH HOH . C 3 HOH A 18 318 242 HOH HOH . C 3 HOH A 19 319 137 HOH HOH . C 3 HOH A 20 320 100 HOH HOH . C 3 HOH A 21 321 131 HOH HOH . C 3 HOH A 22 322 192 HOH HOH . C 3 HOH A 23 323 17 HOH HOH . C 3 HOH A 24 324 269 HOH HOH . C 3 HOH A 25 325 22 HOH HOH . C 3 HOH A 26 326 273 HOH HOH . C 3 HOH A 27 327 71 HOH HOH . C 3 HOH A 28 328 19 HOH HOH . C 3 HOH A 29 329 211 HOH HOH . C 3 HOH A 30 330 5 HOH HOH . C 3 HOH A 31 331 158 HOH HOH . C 3 HOH A 32 332 7 HOH HOH . C 3 HOH A 33 333 169 HOH HOH . C 3 HOH A 34 334 58 HOH HOH . C 3 HOH A 35 335 109 HOH HOH . C 3 HOH A 36 336 190 HOH HOH . C 3 HOH A 37 337 1 HOH HOH . C 3 HOH A 38 338 63 HOH HOH . C 3 HOH A 39 339 200 HOH HOH . C 3 HOH A 40 340 152 HOH HOH . C 3 HOH A 41 341 171 HOH HOH . C 3 HOH A 42 342 64 HOH HOH . C 3 HOH A 43 343 239 HOH HOH . C 3 HOH A 44 344 112 HOH HOH . C 3 HOH A 45 345 133 HOH HOH . C 3 HOH A 46 346 62 HOH HOH . C 3 HOH A 47 347 121 HOH HOH . C 3 HOH A 48 348 88 HOH HOH . C 3 HOH A 49 349 72 HOH HOH . C 3 HOH A 50 350 9 HOH HOH . C 3 HOH A 51 351 144 HOH HOH . C 3 HOH A 52 352 245 HOH HOH . C 3 HOH A 53 353 132 HOH HOH . C 3 HOH A 54 354 26 HOH HOH . C 3 HOH A 55 355 27 HOH HOH . C 3 HOH A 56 356 47 HOH HOH . C 3 HOH A 57 357 29 HOH HOH . C 3 HOH A 58 358 35 HOH HOH . C 3 HOH A 59 359 43 HOH HOH . C 3 HOH A 60 360 61 HOH HOH . C 3 HOH A 61 361 42 HOH HOH . C 3 HOH A 62 362 241 HOH HOH . C 3 HOH A 63 363 48 HOH HOH . C 3 HOH A 64 364 163 HOH HOH . C 3 HOH A 65 365 129 HOH HOH . C 3 HOH A 66 366 20 HOH HOH . C 3 HOH A 67 367 40 HOH HOH . C 3 HOH A 68 368 44 HOH HOH . C 3 HOH A 69 369 57 HOH HOH . C 3 HOH A 70 370 79 HOH HOH . C 3 HOH A 71 371 24 HOH HOH . C 3 HOH A 72 372 15 HOH HOH . C 3 HOH A 73 373 218 HOH HOH . C 3 HOH A 74 374 110 HOH HOH . C 3 HOH A 75 375 38 HOH HOH . C 3 HOH A 76 376 11 HOH HOH . C 3 HOH A 77 377 212 HOH HOH . C 3 HOH A 78 378 31 HOH HOH . C 3 HOH A 79 379 146 HOH HOH . C 3 HOH A 80 380 18 HOH HOH . C 3 HOH A 81 381 263 HOH HOH . C 3 HOH A 82 382 83 HOH HOH . C 3 HOH A 83 383 52 HOH HOH . C 3 HOH A 84 384 66 HOH HOH . C 3 HOH A 85 385 206 HOH HOH . C 3 HOH A 86 386 114 HOH HOH . C 3 HOH A 87 387 14 HOH HOH . C 3 HOH A 88 388 155 HOH HOH . C 3 HOH A 89 389 255 HOH HOH . C 3 HOH A 90 390 102 HOH HOH . C 3 HOH A 91 391 257 HOH HOH . C 3 HOH A 92 392 3 HOH HOH . C 3 HOH A 93 393 34 HOH HOH . C 3 HOH A 94 394 60 HOH HOH . C 3 HOH A 95 395 142 HOH HOH . C 3 HOH A 96 396 74 HOH HOH . C 3 HOH A 97 397 37 HOH HOH . C 3 HOH A 98 398 151 HOH HOH . C 3 HOH A 99 399 101 HOH HOH . C 3 HOH A 100 400 221 HOH HOH . C 3 HOH A 101 401 8 HOH HOH . C 3 HOH A 102 402 123 HOH HOH . C 3 HOH A 103 403 65 HOH HOH . C 3 HOH A 104 404 254 HOH HOH . C 3 HOH A 105 405 138 HOH HOH . C 3 HOH A 106 406 147 HOH HOH . C 3 HOH A 107 407 105 HOH HOH . C 3 HOH A 108 408 4 HOH HOH . C 3 HOH A 109 409 41 HOH HOH . C 3 HOH A 110 410 277 HOH HOH . C 3 HOH A 111 411 81 HOH HOH . C 3 HOH A 112 412 193 HOH HOH . C 3 HOH A 113 413 82 HOH HOH . C 3 HOH A 114 414 175 HOH HOH . C 3 HOH A 115 415 16 HOH HOH . C 3 HOH A 116 416 213 HOH HOH . C 3 HOH A 117 417 170 HOH HOH . C 3 HOH A 118 418 122 HOH HOH . C 3 HOH A 119 419 113 HOH HOH . C 3 HOH A 120 420 125 HOH HOH . C 3 HOH A 121 421 143 HOH HOH . C 3 HOH A 122 422 243 HOH HOH . C 3 HOH A 123 423 13 HOH HOH . C 3 HOH A 124 424 10 HOH HOH . C 3 HOH A 125 425 272 HOH HOH . C 3 HOH A 126 426 51 HOH HOH . C 3 HOH A 127 427 78 HOH HOH . C 3 HOH A 128 428 69 HOH HOH . C 3 HOH A 129 429 103 HOH HOH . C 3 HOH A 130 430 67 HOH HOH . C 3 HOH A 131 431 126 HOH HOH . C 3 HOH A 132 432 168 HOH HOH . C 3 HOH A 133 433 156 HOH HOH . C 3 HOH A 134 434 73 HOH HOH . C 3 HOH A 135 435 49 HOH HOH . C 3 HOH A 136 436 127 HOH HOH . C 3 HOH A 137 437 128 HOH HOH . C 3 HOH A 138 438 115 HOH HOH . C 3 HOH A 139 439 230 HOH HOH . C 3 HOH A 140 440 96 HOH HOH . C 3 HOH A 141 441 181 HOH HOH . C 3 HOH A 142 442 32 HOH HOH . C 3 HOH A 143 443 267 HOH HOH . C 3 HOH A 144 444 166 HOH HOH . C 3 HOH A 145 445 25 HOH HOH . C 3 HOH A 146 446 28 HOH HOH . C 3 HOH A 147 447 70 HOH HOH . C 3 HOH A 148 448 117 HOH HOH . C 3 HOH A 149 449 90 HOH HOH . C 3 HOH A 150 450 59 HOH HOH . C 3 HOH A 151 451 33 HOH HOH . C 3 HOH A 152 452 12 HOH HOH . C 3 HOH A 153 453 2 HOH HOH . C 3 HOH A 154 454 116 HOH HOH . C 3 HOH A 155 455 183 HOH HOH . C 3 HOH A 156 456 89 HOH HOH . C 3 HOH A 157 457 130 HOH HOH . C 3 HOH A 158 458 6 HOH HOH . C 3 HOH A 159 459 120 HOH HOH . C 3 HOH A 160 460 23 HOH HOH . C 3 HOH A 161 461 256 HOH HOH . C 3 HOH A 162 462 86 HOH HOH . C 3 HOH A 163 463 98 HOH HOH . C 3 HOH A 164 464 268 HOH HOH . C 3 HOH A 165 465 106 HOH HOH . C 3 HOH A 166 466 172 HOH HOH . C 3 HOH A 167 467 199 HOH HOH . C 3 HOH A 168 468 219 HOH HOH . C 3 HOH A 169 469 150 HOH HOH . C 3 HOH A 170 470 50 HOH HOH . C 3 HOH A 171 471 177 HOH HOH . C 3 HOH A 172 472 180 HOH HOH . C 3 HOH A 173 473 107 HOH HOH . C 3 HOH A 174 474 36 HOH HOH . C 3 HOH A 175 475 210 HOH HOH . C 3 HOH A 176 476 46 HOH HOH . C 3 HOH A 177 477 195 HOH HOH . C 3 HOH A 178 478 227 HOH HOH . C 3 HOH A 179 479 238 HOH HOH . C 3 HOH A 180 480 236 HOH HOH . C 3 HOH A 181 481 201 HOH HOH . C 3 HOH A 182 482 220 HOH HOH . C 3 HOH A 183 483 176 HOH HOH . C 3 HOH A 184 484 237 HOH HOH . C 3 HOH A 185 485 153 HOH HOH . C 3 HOH A 186 486 196 HOH HOH . C 3 HOH A 187 487 145 HOH HOH . C 3 HOH A 188 488 174 HOH HOH . C 3 HOH A 189 489 232 HOH HOH . C 3 HOH A 190 490 85 HOH HOH . C 3 HOH A 191 491 77 HOH HOH . C 3 HOH A 192 492 194 HOH HOH . C 3 HOH A 193 493 118 HOH HOH . C 3 HOH A 194 494 216 HOH HOH . C 3 HOH A 195 495 160 HOH HOH . C 3 HOH A 196 496 141 HOH HOH . C 3 HOH A 197 497 244 HOH HOH . C 3 HOH A 198 498 159 HOH HOH . C 3 HOH A 199 499 223 HOH HOH . C 3 HOH A 200 500 54 HOH HOH . C 3 HOH A 201 501 124 HOH HOH . C 3 HOH A 202 502 217 HOH HOH . C 3 HOH A 203 503 108 HOH HOH . C 3 HOH A 204 504 56 HOH HOH . C 3 HOH A 205 505 187 HOH HOH . C 3 HOH A 206 506 189 HOH HOH . C 3 HOH A 207 507 247 HOH HOH . C 3 HOH A 208 508 275 HOH HOH . C 3 HOH A 209 509 252 HOH HOH . C 3 HOH A 210 510 95 HOH HOH . C 3 HOH A 211 511 250 HOH HOH . C 3 HOH A 212 512 260 HOH HOH . C 3 HOH A 213 513 167 HOH HOH . C 3 HOH A 214 514 184 HOH HOH . C 3 HOH A 215 515 231 HOH HOH . C 3 HOH A 216 516 197 HOH HOH . C 3 HOH A 217 517 84 HOH HOH . C 3 HOH A 218 518 188 HOH HOH . C 3 HOH A 219 519 251 HOH HOH . C 3 HOH A 220 520 182 HOH HOH . C 3 HOH A 221 521 265 HOH HOH . C 3 HOH A 222 522 209 HOH HOH . C 3 HOH A 223 523 234 HOH HOH . C 3 HOH A 224 524 248 HOH HOH . C 3 HOH A 225 525 80 HOH HOH . C 3 HOH A 226 526 191 HOH HOH . C 3 HOH A 227 527 94 HOH HOH . C 3 HOH A 228 528 279 HOH HOH . C 3 HOH A 229 529 249 HOH HOH . C 3 HOH A 230 530 222 HOH HOH . C 3 HOH A 231 531 161 HOH HOH . C 3 HOH A 232 532 173 HOH HOH . C 3 HOH A 233 533 53 HOH HOH . C 3 HOH A 234 534 162 HOH HOH . C 3 HOH A 235 535 99 HOH HOH . C 3 HOH A 236 536 93 HOH HOH . C 3 HOH A 237 537 76 HOH HOH . C 3 HOH A 238 538 202 HOH HOH . C 3 HOH A 239 539 148 HOH HOH . C 3 HOH A 240 540 165 HOH HOH . C 3 HOH A 241 541 259 HOH HOH . C 3 HOH A 242 542 225 HOH HOH . C 3 HOH A 243 543 214 HOH HOH . C 3 HOH A 244 544 140 HOH HOH . C 3 HOH A 245 545 149 HOH HOH . C 3 HOH A 246 546 55 HOH HOH . C 3 HOH A 247 547 157 HOH HOH . C 3 HOH A 248 548 224 HOH HOH . C 3 HOH A 249 549 154 HOH HOH . C 3 HOH A 250 550 139 HOH HOH . C 3 HOH A 251 551 240 HOH HOH . C 3 HOH A 252 552 45 HOH HOH . C 3 HOH A 253 553 39 HOH HOH . C 3 HOH A 254 554 75 HOH HOH . C 3 HOH A 255 555 97 HOH HOH . C 3 HOH A 256 556 135 HOH HOH . C 3 HOH A 257 557 68 HOH HOH . C 3 HOH A 258 558 207 HOH HOH . C 3 HOH A 259 559 87 HOH HOH . C 3 HOH A 260 560 119 HOH HOH . C 3 HOH A 261 561 179 HOH HOH . C 3 HOH A 262 562 266 HOH HOH . C 3 HOH A 263 563 261 HOH HOH . C 3 HOH A 264 564 262 HOH HOH . C 3 HOH A 265 565 271 HOH HOH . C 3 HOH A 266 566 276 HOH HOH . C 3 HOH A 267 567 278 HOH HOH . C 3 HOH A 268 568 253 HOH HOH . C 3 HOH A 269 569 164 HOH HOH . C 3 HOH A 270 570 233 HOH HOH . C 3 HOH A 271 571 274 HOH HOH . C 3 HOH A 272 572 258 HOH HOH . C 3 HOH A 273 573 246 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAG 5VM . . . B 2 32.417 11.154 57.861 0.8 20.95 ? OAG 5VM 201 A 1 HETATM 2 C CAK 5VM . . . B 2 33.744 11.16 57.669 0.8 16.42 ? CAK 5VM 201 A 1 HETATM 3 C CAD 5VM . . . B 2 34.629 10.187 57.905 0.8 13.01 ? CAD 5VM 201 A 1 HETATM 4 C CAC 5VM . . . B 2 35.957 10.417 57.635 0.8 10.86 ? CAC 5VM 201 A 1 HETATM 5 C CAH 5VM . . . B 2 36.338 11.641 57.134 0.8 13.06 ? CAH 5VM 201 A 1 HETATM 6 CL CLB 5VM . . . B 2 37.983 11.925 56.832 0.8 10.02 ? CLB 5VM 201 A 1 HETATM 7 C CAE 5VM . . . B 2 35.389 12.629 56.902 0.8 15.19 ? CAE 5VM 201 A 1 HETATM 8 C CAJ 5VM . . . B 2 34.102 12.364 57.173 0.8 16.67 ? CAJ 5VM 201 A 1 HETATM 9 N NAF 5VM . . . B 2 32.991 13.112 57.059 0.8 21.39 ? NAF 5VM 201 A 1 HETATM 10 C CAI 5VM . . . B 2 31.984 12.353 57.48 0.8 21.02 ? CAI 5VM 201 A 1 HETATM 11 S SAA 5VM . . . B 2 30.288 12.807 57.561 0.8 29.27 ? SAA 5VM 201 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #