data_5F6Y # _model_server_result.job_id ddLM0cPmZLiaHAxZFpJZMw _model_server_result.datetime_utc '2024-11-29 00:19:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f6y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5F6Y # _exptl.entry_id 5F6Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 185.631 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-chloranyl-3~{H}-1,3-benzoxazole-2-thione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.82 _cell.angle_gamma 90 _cell.entry_id 5F6Y _cell.length_a 50.237 _cell.length_b 35.492 _cell.length_c 58.122 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F6Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H4 Cl N O S' _chem_comp.formula_weight 185.631 _chem_comp.id 5VM _chem_comp.mon_nstd_flag . _chem_comp.name 5-chloranyl-3~{H}-1,3-benzoxazole-2-thione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CLB CAH 5VM sing 1 n n CAE CAH 5VM doub 2 n y CAE CAJ 5VM sing 3 n y NAF CAJ 5VM sing 4 n n NAF CAI 5VM sing 5 n n CAH CAC 5VM sing 6 n y CAJ CAK 5VM doub 7 n y CAI SAA 5VM doub 8 n n CAI OAG 5VM sing 9 n n CAC CAD 5VM doub 10 n y CAK OAG 5VM sing 11 n n CAK CAD 5VM sing 12 n y CAD H1 5VM sing 13 n n CAC H2 5VM sing 14 n n CAE H3 5VM sing 15 n n NAF H4 5VM sing 16 n n # _atom_sites.entry_id 5F6Y _atom_sites.fract_transf_matrix[1][1] 0.019906 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007969 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018533 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5VM A 1 201 1 5VM DRG . C 3 HOH A 1 301 75 HOH HOH . C 3 HOH A 2 302 68 HOH HOH . C 3 HOH A 3 303 123 HOH HOH . C 3 HOH A 4 304 259 HOH HOH . C 3 HOH A 5 305 80 HOH HOH . C 3 HOH A 6 306 73 HOH HOH . C 3 HOH A 7 307 21 HOH HOH . C 3 HOH A 8 308 10 HOH HOH . C 3 HOH A 9 309 113 HOH HOH . C 3 HOH A 10 310 17 HOH HOH . C 3 HOH A 11 311 18 HOH HOH . C 3 HOH A 12 312 8 HOH HOH . C 3 HOH A 13 313 5 HOH HOH . C 3 HOH A 14 314 27 HOH HOH . C 3 HOH A 15 315 20 HOH HOH . C 3 HOH A 16 316 59 HOH HOH . C 3 HOH A 17 317 97 HOH HOH . C 3 HOH A 18 318 14 HOH HOH . C 3 HOH A 19 319 41 HOH HOH . C 3 HOH A 20 320 196 HOH HOH . C 3 HOH A 21 321 42 HOH HOH . C 3 HOH A 22 322 23 HOH HOH . C 3 HOH A 23 323 181 HOH HOH . C 3 HOH A 24 324 38 HOH HOH . C 3 HOH A 25 325 1 HOH HOH . C 3 HOH A 26 326 25 HOH HOH . C 3 HOH A 27 327 20 HOH HOH . C 3 HOH A 28 328 111 HOH HOH . C 3 HOH A 29 329 19 HOH HOH . C 3 HOH A 30 330 2 HOH HOH . C 3 HOH A 31 331 124 HOH HOH . C 3 HOH A 32 332 132 HOH HOH . C 3 HOH A 33 333 29 HOH HOH . C 3 HOH A 34 334 252 HOH HOH . C 3 HOH A 35 335 254 HOH HOH . C 3 HOH A 36 336 263 HOH HOH . C 3 HOH A 37 337 94 HOH HOH . C 3 HOH A 38 338 51 HOH HOH . C 3 HOH A 39 339 108 HOH HOH . C 3 HOH A 40 340 11 HOH HOH . C 3 HOH A 41 341 24 HOH HOH . C 3 HOH A 42 342 1 HOH HOH . C 3 HOH A 43 343 34 HOH HOH . C 3 HOH A 44 344 37 HOH HOH . C 3 HOH A 45 345 264 HOH HOH . C 3 HOH A 46 346 78 HOH HOH . C 3 HOH A 47 347 107 HOH HOH . C 3 HOH A 48 348 9 HOH HOH . C 3 HOH A 49 349 8 HOH HOH . C 3 HOH A 50 350 55 HOH HOH . C 3 HOH A 51 351 2 HOH HOH . C 3 HOH A 52 352 13 HOH HOH . C 3 HOH A 53 353 57 HOH HOH . C 3 HOH A 54 354 23 HOH HOH . C 3 HOH A 55 355 27 HOH HOH . C 3 HOH A 56 356 11 HOH HOH . C 3 HOH A 57 357 26 HOH HOH . C 3 HOH A 58 358 12 HOH HOH . C 3 HOH A 59 359 70 HOH HOH . C 3 HOH A 60 360 114 HOH HOH . C 3 HOH A 61 361 48 HOH HOH . C 3 HOH A 62 362 22 HOH HOH . C 3 HOH A 63 363 7 HOH HOH . C 3 HOH A 64 364 43 HOH HOH . C 3 HOH A 65 365 96 HOH HOH . C 3 HOH A 66 366 21 HOH HOH . C 3 HOH A 67 367 36 HOH HOH . C 3 HOH A 68 368 77 HOH HOH . C 3 HOH A 69 369 100 HOH HOH . C 3 HOH A 70 370 45 HOH HOH . C 3 HOH A 71 371 62 HOH HOH . C 3 HOH A 72 372 16 HOH HOH . C 3 HOH A 73 373 4 HOH HOH . C 3 HOH A 74 374 26 HOH HOH . C 3 HOH A 75 375 3 HOH HOH . C 3 HOH A 76 376 15 HOH HOH . C 3 HOH A 77 377 112 HOH HOH . C 3 HOH A 78 378 13 HOH HOH . C 3 HOH A 79 379 53 HOH HOH . C 3 HOH A 80 380 39 HOH HOH . C 3 HOH A 81 381 48 HOH HOH . C 3 HOH A 82 382 28 HOH HOH . C 3 HOH A 83 383 272 HOH HOH . C 3 HOH A 84 384 19 HOH HOH . C 3 HOH A 85 385 16 HOH HOH . C 3 HOH A 86 386 122 HOH HOH . C 3 HOH A 87 387 79 HOH HOH . C 3 HOH A 88 388 6 HOH HOH . C 3 HOH A 89 389 31 HOH HOH . C 3 HOH A 90 390 102 HOH HOH . C 3 HOH A 91 391 25 HOH HOH . C 3 HOH A 92 392 18 HOH HOH . C 3 HOH A 93 393 7 HOH HOH . C 3 HOH A 94 394 129 HOH HOH . C 3 HOH A 95 395 66 HOH HOH . C 3 HOH A 96 396 4 HOH HOH . C 3 HOH A 97 397 10 HOH HOH . C 3 HOH A 98 398 46 HOH HOH . C 3 HOH A 99 399 9 HOH HOH . C 3 HOH A 100 400 33 HOH HOH . C 3 HOH A 101 401 103 HOH HOH . C 3 HOH A 102 402 157 HOH HOH . C 3 HOH A 103 403 77 HOH HOH . C 3 HOH A 104 404 12 HOH HOH . C 3 HOH A 105 405 105 HOH HOH . C 3 HOH A 106 406 74 HOH HOH . C 3 HOH A 107 407 36 HOH HOH . C 3 HOH A 108 408 55 HOH HOH . C 3 HOH A 109 409 134 HOH HOH . C 3 HOH A 110 410 5 HOH HOH . C 3 HOH A 111 411 110 HOH HOH . C 3 HOH A 112 412 58 HOH HOH . C 3 HOH A 113 413 22 HOH HOH . C 3 HOH A 114 414 122 HOH HOH . C 3 HOH A 115 415 99 HOH HOH . C 3 HOH A 116 416 125 HOH HOH . C 3 HOH A 117 417 3 HOH HOH . C 3 HOH A 118 418 95 HOH HOH . C 3 HOH A 119 419 71 HOH HOH . C 3 HOH A 120 420 64 HOH HOH . C 3 HOH A 121 421 75 HOH HOH . C 3 HOH A 122 422 32 HOH HOH . C 3 HOH A 123 423 89 HOH HOH . C 3 HOH A 124 424 35 HOH HOH . C 3 HOH A 125 425 87 HOH HOH . C 3 HOH A 126 426 71 HOH HOH . C 3 HOH A 127 427 119 HOH HOH . C 3 HOH A 128 428 119 HOH HOH . C 3 HOH A 129 429 124 HOH HOH . C 3 HOH A 130 430 133 HOH HOH . C 3 HOH A 131 431 47 HOH HOH . C 3 HOH A 132 432 104 HOH HOH . C 3 HOH A 133 433 82 HOH HOH . C 3 HOH A 134 434 15 HOH HOH . C 3 HOH A 135 435 49 HOH HOH . C 3 HOH A 136 436 17 HOH HOH . C 3 HOH A 137 437 103 HOH HOH . C 3 HOH A 138 438 106 HOH HOH . C 3 HOH A 139 439 96 HOH HOH . C 3 HOH A 140 440 175 HOH HOH . C 3 HOH A 141 441 118 HOH HOH . C 3 HOH A 142 442 84 HOH HOH . C 3 HOH A 143 443 220 HOH HOH . C 3 HOH A 144 444 84 HOH HOH . C 3 HOH A 145 445 121 HOH HOH . C 3 HOH A 146 446 73 HOH HOH . C 3 HOH A 147 447 61 HOH HOH . C 3 HOH A 148 448 58 HOH HOH . C 3 HOH A 149 449 32 HOH HOH . C 3 HOH A 150 450 105 HOH HOH . C 3 HOH A 151 451 83 HOH HOH . C 3 HOH A 152 452 63 HOH HOH . C 3 HOH A 153 453 83 HOH HOH . C 3 HOH A 154 454 44 HOH HOH . C 3 HOH A 155 455 89 HOH HOH . C 3 HOH A 156 456 87 HOH HOH . C 3 HOH A 157 457 91 HOH HOH . C 3 HOH A 158 458 97 HOH HOH . C 3 HOH A 159 459 54 HOH HOH . C 3 HOH A 160 460 65 HOH HOH . C 3 HOH A 161 461 101 HOH HOH . C 3 HOH A 162 462 30 HOH HOH . C 3 HOH A 163 463 24 HOH HOH . C 3 HOH A 164 464 63 HOH HOH . C 3 HOH A 165 465 79 HOH HOH . C 3 HOH A 166 466 90 HOH HOH . C 3 HOH A 167 467 40 HOH HOH . C 3 HOH A 168 468 117 HOH HOH . C 3 HOH A 169 469 137 HOH HOH . C 3 HOH A 170 470 34 HOH HOH . C 3 HOH A 171 471 38 HOH HOH . C 3 HOH A 172 472 51 HOH HOH . C 3 HOH A 173 473 81 HOH HOH . C 3 HOH A 174 474 80 HOH HOH . C 3 HOH A 175 475 153 HOH HOH . C 3 HOH A 176 476 82 HOH HOH . C 3 HOH A 177 477 52 HOH HOH . C 3 HOH A 178 478 208 HOH HOH . C 3 HOH A 179 479 116 HOH HOH . C 3 HOH A 180 480 161 HOH HOH . C 3 HOH A 181 481 135 HOH HOH . C 3 HOH A 182 482 93 HOH HOH . C 3 HOH A 183 483 159 HOH HOH . C 3 HOH A 184 484 117 HOH HOH . C 3 HOH A 185 485 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAG 5VM . . . B 2 31.995 11.173 57.906 0.8 17.79 ? OAG 5VM 201 A 1 HETATM 2 C CAK 5VM . . . B 2 33.344 11.224 57.601 0.8 14.5 ? CAK 5VM 201 A 1 HETATM 3 C CAD 5VM . . . B 2 34.266 10.187 57.816 0.8 13.85 ? CAD 5VM 201 A 1 HETATM 4 C CAC 5VM . . . B 2 35.569 10.436 57.494 0.8 11.01 ? CAC 5VM 201 A 1 HETATM 5 C CAH 5VM . . . B 2 35.876 11.682 56.942 0.8 11.4 ? CAH 5VM 201 A 1 HETATM 6 CL CLB 5VM . . . B 2 37.546 11.944 56.587 0.8 15.61 ? CLB 5VM 201 A 1 HETATM 7 C CAE 5VM . . . B 2 34.974 12.719 56.743 0.8 14.16 ? CAE 5VM 201 A 1 HETATM 8 C CAJ 5VM . . . B 2 33.666 12.477 57.081 0.8 15.43 ? CAJ 5VM 201 A 1 HETATM 9 N NAF 5VM . . . B 2 32.513 13.194 57.024 0.8 19.98 ? NAF 5VM 201 A 1 HETATM 10 C CAI 5VM . . . B 2 31.566 12.396 57.535 0.8 19 ? CAI 5VM 201 A 1 HETATM 11 S SAA 5VM . . . B 2 29.913 12.852 57.682 0.8 28.16 ? SAA 5VM 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #