data_5F8L # _model_server_result.job_id rYEkirEX-IBWxniOFRXe2g _model_server_result.datetime_utc '2024-11-22 12:11:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f8l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2001}' # _entry.id 5F8L # _exptl.entry_id 5F8L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5F8L _cell.length_a 62.228 _cell.length_b 76.709 _cell.length_c 151.247 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F8L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 271 A HIS 271 1_555 D ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? metalc ? metalc2 A NE2 HIS 273 A HIS 273 1_555 D ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc3 A SG CYS 282 A CYS 282 1_555 D ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc4 A OE1 GLU 343 A GLU 343 1_555 D ZN ZN . A ZN 2001 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 1.788 ? hydrog WATSON-CRICK hydrog1 B N1 G 19 B G 601 1_555 C N3 C 18 C C 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N2 G 19 B G 601 1_555 C O2 C 18 C C 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O6 G 19 B G 601 1_555 C N4 C 18 C C 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N1 G 20 B G 602 1_555 C N3 C 17 C C 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N2 G 20 B G 602 1_555 C O2 C 17 C C 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B O6 G 20 B G 602 1_555 C N4 C 17 C C 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N3 U 21 B U 603 1_555 C N1 A 16 C A 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B O4 U 21 B U 603 1_555 C N6 A 16 C A 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N3 C 22 B C 604 1_555 C N1 G 15 C G 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N4 C 22 B C 604 1_555 C O6 G 15 C G 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B O2 C 22 B C 604 1_555 C N2 G 15 C G 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N3 U 23 B U 605 1_555 C N1 A 14 C A 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B O4 U 23 B U 605 1_555 C N6 A 14 C A 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N3 C 24 B C 606 1_555 C N1 G 13 C G 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N4 C 24 B C 606 1_555 C O6 G 13 C G 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B O2 C 24 B C 606 1_555 C N2 G 13 C G 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N3 U 25 B U 607 1_555 C N1 A 12 C A 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B O4 U 25 B U 607 1_555 C N6 A 12 C A 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-G PAIR' hydrog19 B O2 C 26 B C 608 1_555 C N1 G 11 C G 694 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N3 U 27 B U 609 1_555 C N1 A 10 C A 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B O4 U 27 B U 609 1_555 C N6 A 10 C A 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N3 C 28 B C 610 1_555 C N1 G 9 C G 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B N4 C 28 B C 610 1_555 C O6 G 9 C G 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B O2 C 28 B C 610 1_555 C N2 G 9 C G 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5F8L _atom_sites.fract_transf_matrix[1][1] 0.01607 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013036 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006612 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 2001 2001 ZN ZN . E 5 HOH A 1 2101 77 HOH HOH . E 5 HOH A 2 2102 10 HOH HOH . E 5 HOH A 3 2103 7 HOH HOH . E 5 HOH A 4 2104 76 HOH HOH . E 5 HOH A 5 2105 35 HOH HOH . E 5 HOH A 6 2106 31 HOH HOH . E 5 HOH A 7 2107 50 HOH HOH . E 5 HOH A 8 2108 72 HOH HOH . E 5 HOH A 9 2109 87 HOH HOH . E 5 HOH A 10 2110 45 HOH HOH . E 5 HOH A 11 2111 47 HOH HOH . E 5 HOH A 12 2112 68 HOH HOH . E 5 HOH A 13 2113 38 HOH HOH . E 5 HOH A 14 2114 79 HOH HOH . E 5 HOH A 15 2115 23 HOH HOH . E 5 HOH A 16 2116 53 HOH HOH . E 5 HOH A 17 2117 70 HOH HOH . E 5 HOH A 18 2118 8 HOH HOH . E 5 HOH A 19 2119 26 HOH HOH . E 5 HOH A 20 2120 37 HOH HOH . E 5 HOH A 21 2121 4 HOH HOH . E 5 HOH A 22 2122 58 HOH HOH . E 5 HOH A 23 2123 20 HOH HOH . E 5 HOH A 24 2124 51 HOH HOH . E 5 HOH A 25 2125 62 HOH HOH . E 5 HOH A 26 2126 88 HOH HOH . E 5 HOH A 27 2127 9 HOH HOH . E 5 HOH A 28 2128 66 HOH HOH . E 5 HOH A 29 2129 34 HOH HOH . E 5 HOH A 30 2130 46 HOH HOH . E 5 HOH A 31 2131 60 HOH HOH . E 5 HOH A 32 2132 27 HOH HOH . E 5 HOH A 33 2133 55 HOH HOH . E 5 HOH A 34 2134 56 HOH HOH . E 5 HOH A 35 2135 16 HOH HOH . E 5 HOH A 36 2136 36 HOH HOH . E 5 HOH A 37 2137 13 HOH HOH . E 5 HOH A 38 2138 69 HOH HOH . E 5 HOH A 39 2139 71 HOH HOH . E 5 HOH A 40 2140 67 HOH HOH . E 5 HOH A 41 2141 82 HOH HOH . E 5 HOH A 42 2142 5 HOH HOH . E 5 HOH A 43 2143 81 HOH HOH . E 5 HOH A 44 2144 32 HOH HOH . E 5 HOH A 45 2145 84 HOH HOH . E 5 HOH A 46 2146 42 HOH HOH . E 5 HOH A 47 2147 11 HOH HOH . E 5 HOH A 48 2148 15 HOH HOH . E 5 HOH A 49 2149 29 HOH HOH . E 5 HOH A 50 2150 54 HOH HOH . E 5 HOH A 51 2151 18 HOH HOH . E 5 HOH A 52 2152 12 HOH HOH . E 5 HOH A 53 2153 25 HOH HOH . E 5 HOH A 54 2154 40 HOH HOH . E 5 HOH A 55 2155 83 HOH HOH . E 5 HOH A 56 2156 80 HOH HOH . E 5 HOH A 57 2157 28 HOH HOH . E 5 HOH A 58 2158 49 HOH HOH . E 5 HOH A 59 2159 43 HOH HOH . E 5 HOH A 60 2160 59 HOH HOH . E 5 HOH A 61 2161 61 HOH HOH . E 5 HOH A 62 2162 52 HOH HOH . E 5 HOH A 63 2163 17 HOH HOH . E 5 HOH A 64 2164 65 HOH HOH . E 5 HOH A 65 2165 78 HOH HOH . E 5 HOH A 66 2166 33 HOH HOH . E 5 HOH A 67 2167 14 HOH HOH . E 5 HOH A 68 2168 64 HOH HOH . E 5 HOH A 69 2169 48 HOH HOH . E 5 HOH A 70 2170 41 HOH HOH . E 5 HOH A 71 2171 85 HOH HOH . E 5 HOH A 72 2172 63 HOH HOH . E 5 HOH A 73 2173 73 HOH HOH . E 5 HOH A 74 2174 44 HOH HOH . E 5 HOH A 75 2175 24 HOH HOH . E 5 HOH A 76 2176 57 HOH HOH . E 5 HOH A 77 2177 6 HOH HOH . E 5 HOH A 78 2178 39 HOH HOH . E 5 HOH A 79 2179 30 HOH HOH . E 5 HOH A 80 2180 86 HOH HOH . F 5 HOH B 1 701 3 HOH HOH . F 5 HOH B 2 702 74 HOH HOH . F 5 HOH B 3 703 2 HOH HOH . F 5 HOH B 4 704 19 HOH HOH . F 5 HOH B 5 705 75 HOH HOH . F 5 HOH B 6 706 1 HOH HOH . F 5 HOH B 7 707 93 HOH HOH . F 5 HOH B 8 708 96 HOH HOH . F 5 HOH B 9 709 91 HOH HOH . F 5 HOH B 10 710 95 HOH HOH . F 5 HOH B 11 711 94 HOH HOH . F 5 HOH B 12 712 22 HOH HOH . G 5 HOH C 1 801 90 HOH HOH . G 5 HOH C 2 802 92 HOH HOH . G 5 HOH C 3 803 89 HOH HOH . G 5 HOH C 4 804 21 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 26.574 _atom_site.Cartn_y -7.718 _atom_site.Cartn_z 1.642 _atom_site.occupancy 0.71 _atom_site.B_iso_or_equiv 46.94 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 2001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #