data_5F8U # _model_server_result.job_id y3QEaUjhmPSd2FRjYHlkNQ _model_server_result.datetime_utc '2024-11-01 13:42:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f8u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":400}' # _entry.id 5F8U # _exptl.entry_id 5F8U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 287.357 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.83 _cell.angle_gamma 90 _cell.entry_id 5F8U _cell.length_a 229.66 _cell.length_b 79.59 _cell.length_c 69.04 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F8U _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 84 B CYS 114 1_555 A SG CYS 169 B CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 162 B CYS 192 1_555 A SG CYS 168 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 B SG CYS 84 A CYS 114 1_555 B SG CYS 169 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf4 B SG CYS 162 A CYS 192 1_555 B SG CYS 168 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? # _chem_comp.formula 'C16 H21 N3 O2' _chem_comp.formula_weight 287.357 _chem_comp.id P32 _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 N3 P32 trip 235 n n C16 C1 P32 sing 236 n n N1 C1 P32 doub 237 n n N1 C8 P32 sing 238 n n C1 C2 P32 sing 239 n n C2 C3 P32 sing 240 n n C3 C4 P32 sing 241 n y C3 C8 P32 doub 242 n y C4 C5 P32 doub 243 n y C4 O1 P32 sing 244 n n C5 C6 P32 sing 245 n y C6 C7 P32 doub 246 n y C7 C8 P32 sing 247 n y O1 C9 P32 sing 248 n n C9 C10 P32 sing 249 n n C10 O2 P32 sing 250 n n C10 C11 P32 sing 251 n n C11 N2 P32 sing 252 n n N2 C12 P32 sing 253 n n C12 C13 P32 sing 254 n n C12 C14 P32 sing 255 n n C12 C15 P32 sing 256 n n C2 H2 P32 sing 257 n n C2 H1 P32 sing 258 n n C5 H5 P32 sing 259 n n C6 H6 P32 sing 260 n n C7 H7 P32 sing 261 n n C9 H9C1 P32 sing 262 n n C9 H9C2 P32 sing 263 n n C10 H10 P32 sing 264 n n O2 HA P32 sing 265 n n C11 H111 P32 sing 266 n n C11 H112 P32 sing 267 n n N2 HB P32 sing 268 n n C13 H131 P32 sing 269 n n C13 H132 P32 sing 270 n n C13 H133 P32 sing 271 n n C14 H141 P32 sing 272 n n C14 H142 P32 sing 273 n n C14 H143 P32 sing 274 n n C15 H151 P32 sing 275 n n C15 H152 P32 sing 276 n n C15 H153 P32 sing 277 n n # _atom_sites.entry_id 5F8U _atom_sites.fract_transf_matrix[1][1] 0.004354 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000912 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012564 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014799 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 P32 B 1 400 400 P32 P32 . D 2 P32 A 1 400 400 P32 P32 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 P32 . . . C 2 27.346 -1.143 27.909 1 22.36 ? O2 P32 400 B 1 HETATM 2 C C10 P32 . . . C 2 27.341 -0.112 28.885 1 22.35 ? C10 P32 400 B 1 HETATM 3 N N3 P32 . . . C 2 30.149 6.338 32.706 1 36.02 ? N3 P32 400 B 1 HETATM 4 C C11 P32 . . . C 2 28.708 0.017 29.561 1 22.72 ? C11 P32 400 B 1 HETATM 5 N N2 P32 . . . C 2 29.718 -0.771 28.868 1 23.05 ? N2 P32 400 B 1 HETATM 6 C C12 P32 . . . C 2 31.159 -0.512 28.958 1 24.76 ? C12 P32 400 B 1 HETATM 7 C C15 P32 . . . C 2 31.477 0.942 29.27 1 26.59 ? C15 P32 400 B 1 HETATM 8 C C13 P32 . . . C 2 31.858 -0.891 27.651 1 23.33 ? C13 P32 400 B 1 HETATM 9 C C9 P32 . . . C 2 26.931 1.152 28.174 1 21.89 ? C9 P32 400 B 1 HETATM 10 O O1 P32 . . . C 2 27.952 2.11 28.343 1 21.86 ? O1 P32 400 B 1 HETATM 11 C C4 P32 . . . C 2 27.687 3.416 28.133 1 24.99 ? C4 P32 400 B 1 HETATM 12 C C5 P32 . . . C 2 26.961 3.841 27.018 1 25.14 ? C5 P32 400 B 1 HETATM 13 C C6 P32 . . . C 2 26.692 5.204 26.815 1 26.09 ? C6 P32 400 B 1 HETATM 14 C C7 P32 . . . C 2 27.13 6.206 27.695 1 28.01 ? C7 P32 400 B 1 HETATM 15 C C8 P32 . . . C 2 27.877 5.889 28.842 1 29.52 ? C8 P32 400 B 1 HETATM 16 C C3 P32 . . . C 2 28.176 4.433 29.097 1 27.96 ? C3 P32 400 B 1 HETATM 17 N N1 P32 . . . C 2 28.434 6.622 29.862 1 29.43 ? N1 P32 400 B 1 HETATM 18 C C1 P32 . . . C 2 28.996 5.658 30.62 1 30.49 ? C1 P32 400 B 1 HETATM 19 C C2 P32 . . . C 2 28.93 4.192 30.3 1 28.49 ? C2 P32 400 B 1 HETATM 20 C C16 P32 . . . C 2 29.617 6.016 31.737 1 32.68 ? C16 P32 400 B 1 HETATM 21 C C14 P32 . . . C 2 31.747 -1.311 30.111 1 25.54 ? C14 P32 400 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 21 #