data_5FAA # _model_server_result.job_id nFbHFPqHrPnH3L_OtVGaHA _model_server_result.datetime_utc '2024-12-01 20:39:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5faa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5FAA # _exptl.entry_id 5FAA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5FAA _cell.length_a 100.24 _cell.length_b 100.24 _cell.length_c 57.539 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FAA _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 157 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 184 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id CG _struct_conn.ptnr2_label_comp_id ASP _struct_conn.ptnr2_label_seq_id 268 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ASP _struct_conn.ptnr2_auth_seq_id 295 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.268 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 5FAA _atom_sites.fract_transf_matrix[1][1] 0.009976 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009976 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01738 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 1 EDO EDO . C 3 HOH A 1 501 103 HOH HOH . C 3 HOH A 2 502 25 HOH HOH . C 3 HOH A 3 503 194 HOH HOH . C 3 HOH A 4 504 42 HOH HOH . C 3 HOH A 5 505 85 HOH HOH . C 3 HOH A 6 506 44 HOH HOH . C 3 HOH A 7 507 69 HOH HOH . C 3 HOH A 8 508 54 HOH HOH . C 3 HOH A 9 509 78 HOH HOH . C 3 HOH A 10 510 23 HOH HOH . C 3 HOH A 11 511 176 HOH HOH . C 3 HOH A 12 512 31 HOH HOH . C 3 HOH A 13 513 22 HOH HOH . C 3 HOH A 14 514 14 HOH HOH . C 3 HOH A 15 515 20 HOH HOH . C 3 HOH A 16 516 27 HOH HOH . C 3 HOH A 17 517 39 HOH HOH . C 3 HOH A 18 518 64 HOH HOH . C 3 HOH A 19 519 121 HOH HOH . C 3 HOH A 20 520 28 HOH HOH . C 3 HOH A 21 521 91 HOH HOH . C 3 HOH A 22 522 10 HOH HOH . C 3 HOH A 23 523 19 HOH HOH . C 3 HOH A 24 524 15 HOH HOH . C 3 HOH A 25 525 60 HOH HOH . C 3 HOH A 26 526 70 HOH HOH . C 3 HOH A 27 527 79 HOH HOH . C 3 HOH A 28 528 133 HOH HOH . C 3 HOH A 29 529 35 HOH HOH . C 3 HOH A 30 530 131 HOH HOH . C 3 HOH A 31 531 21 HOH HOH . C 3 HOH A 32 532 66 HOH HOH . C 3 HOH A 33 533 181 HOH HOH . C 3 HOH A 34 534 77 HOH HOH . C 3 HOH A 35 535 195 HOH HOH . C 3 HOH A 36 536 75 HOH HOH . C 3 HOH A 37 537 1 HOH HOH . C 3 HOH A 38 538 3 HOH HOH . C 3 HOH A 39 539 7 HOH HOH . C 3 HOH A 40 540 26 HOH HOH . C 3 HOH A 41 541 62 HOH HOH . C 3 HOH A 42 542 180 HOH HOH . C 3 HOH A 43 543 88 HOH HOH . C 3 HOH A 44 544 41 HOH HOH . C 3 HOH A 45 545 172 HOH HOH . C 3 HOH A 46 546 24 HOH HOH . C 3 HOH A 47 547 37 HOH HOH . C 3 HOH A 48 548 13 HOH HOH . C 3 HOH A 49 549 154 HOH HOH . C 3 HOH A 50 550 6 HOH HOH . C 3 HOH A 51 551 11 HOH HOH . C 3 HOH A 52 552 183 HOH HOH . C 3 HOH A 53 553 182 HOH HOH . C 3 HOH A 54 554 187 HOH HOH . C 3 HOH A 55 555 5 HOH HOH . C 3 HOH A 56 556 177 HOH HOH . C 3 HOH A 57 557 174 HOH HOH . C 3 HOH A 58 558 9 HOH HOH . C 3 HOH A 59 559 184 HOH HOH . C 3 HOH A 60 560 197 HOH HOH . C 3 HOH A 61 561 98 HOH HOH . C 3 HOH A 62 562 192 HOH HOH . C 3 HOH A 63 563 111 HOH HOH . C 3 HOH A 64 564 148 HOH HOH . C 3 HOH A 65 565 175 HOH HOH . C 3 HOH A 66 566 107 HOH HOH . C 3 HOH A 67 567 17 HOH HOH . C 3 HOH A 68 568 49 HOH HOH . C 3 HOH A 69 569 190 HOH HOH . C 3 HOH A 70 570 48 HOH HOH . C 3 HOH A 71 571 73 HOH HOH . C 3 HOH A 72 572 67 HOH HOH . C 3 HOH A 73 573 61 HOH HOH . C 3 HOH A 74 574 124 HOH HOH . C 3 HOH A 75 575 68 HOH HOH . C 3 HOH A 76 576 57 HOH HOH . C 3 HOH A 77 577 4 HOH HOH . C 3 HOH A 78 578 63 HOH HOH . C 3 HOH A 79 579 188 HOH HOH . C 3 HOH A 80 580 112 HOH HOH . C 3 HOH A 81 581 201 HOH HOH . C 3 HOH A 82 582 36 HOH HOH . C 3 HOH A 83 583 2 HOH HOH . C 3 HOH A 84 584 52 HOH HOH . C 3 HOH A 85 585 134 HOH HOH . C 3 HOH A 86 586 205 HOH HOH . C 3 HOH A 87 587 72 HOH HOH . C 3 HOH A 88 588 43 HOH HOH . C 3 HOH A 89 589 139 HOH HOH . C 3 HOH A 90 590 30 HOH HOH . C 3 HOH A 91 591 38 HOH HOH . C 3 HOH A 92 592 55 HOH HOH . C 3 HOH A 93 593 109 HOH HOH . C 3 HOH A 94 594 189 HOH HOH . C 3 HOH A 95 595 50 HOH HOH . C 3 HOH A 96 596 45 HOH HOH . C 3 HOH A 97 597 74 HOH HOH . C 3 HOH A 98 598 160 HOH HOH . C 3 HOH A 99 599 33 HOH HOH . C 3 HOH A 100 600 16 HOH HOH . C 3 HOH A 101 601 130 HOH HOH . C 3 HOH A 102 602 151 HOH HOH . C 3 HOH A 103 603 46 HOH HOH . C 3 HOH A 104 604 59 HOH HOH . C 3 HOH A 105 605 18 HOH HOH . C 3 HOH A 106 606 65 HOH HOH . C 3 HOH A 107 607 8 HOH HOH . C 3 HOH A 108 608 101 HOH HOH . C 3 HOH A 109 609 185 HOH HOH . C 3 HOH A 110 610 191 HOH HOH . C 3 HOH A 111 611 179 HOH HOH . C 3 HOH A 112 612 203 HOH HOH . C 3 HOH A 113 613 166 HOH HOH . C 3 HOH A 114 614 12 HOH HOH . C 3 HOH A 115 615 171 HOH HOH . C 3 HOH A 116 616 40 HOH HOH . C 3 HOH A 117 617 29 HOH HOH . C 3 HOH A 118 618 127 HOH HOH . C 3 HOH A 119 619 165 HOH HOH . C 3 HOH A 120 620 58 HOH HOH . C 3 HOH A 121 621 178 HOH HOH . C 3 HOH A 122 622 146 HOH HOH . C 3 HOH A 123 623 206 HOH HOH . C 3 HOH A 124 624 149 HOH HOH . C 3 HOH A 125 625 115 HOH HOH . C 3 HOH A 126 626 96 HOH HOH . C 3 HOH A 127 627 173 HOH HOH . C 3 HOH A 128 628 204 HOH HOH . C 3 HOH A 129 629 186 HOH HOH . C 3 HOH A 130 630 47 HOH HOH . C 3 HOH A 131 631 110 HOH HOH . C 3 HOH A 132 632 202 HOH HOH . C 3 HOH A 133 633 102 HOH HOH . C 3 HOH A 134 634 164 HOH HOH . C 3 HOH A 135 635 123 HOH HOH . C 3 HOH A 136 636 196 HOH HOH . C 3 HOH A 137 637 84 HOH HOH . C 3 HOH A 138 638 122 HOH HOH . C 3 HOH A 139 639 104 HOH HOH . C 3 HOH A 140 640 193 HOH HOH . C 3 HOH A 141 641 200 HOH HOH . C 3 HOH A 142 642 170 HOH HOH . C 3 HOH A 143 643 198 HOH HOH . C 3 HOH A 144 644 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 -16.309 -2.768 -27.247 1 30.3 ? C1 EDO 401 A 1 HETATM 2 O O1 EDO . . . B 2 -15.864 -1.738 -26.355 1 28.3 ? O1 EDO 401 A 1 HETATM 3 C C2 EDO . . . B 2 -17.456 -2.261 -28.114 1 28.3 ? C2 EDO 401 A 1 HETATM 4 O O2 EDO . . . B 2 -16.953 -1.345 -29.089 1 32.53 ? O2 EDO 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #