data_5FAO # _model_server_result.job_id 2skScleZ42XeA1c8VsRDpg _model_server_result.datetime_utc '2025-03-11 05:06:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fao # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 5FAO # _exptl.entry_id 5FAO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 352.364 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[[(3~{R},6~{S})-1-methanoyl-6-[[(3~{S})-pyrrolidin-3-yl]oxycarbamoyl]piperidin-3-yl]amino] hydrogen sulfate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5FAO _cell.length_a 43.89 _cell.length_b 62.73 _cell.length_c 175.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FAO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 45 A SER 70 1_555 C CAP 5VW . A 5VW 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? covale ? covale2 B OG SER 45 B SER 70 1_555 D CAP 5VW . B 5VW 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.192 ? # _chem_comp.formula 'C11 H20 N4 O7 S' _chem_comp.formula_weight 352.364 _chem_comp.id 5VW _chem_comp.mon_nstd_flag . _chem_comp.name '[[(3~{R},6~{S})-1-methanoyl-6-[[(3~{S})-pyrrolidin-3-yl]oxycarbamoyl]piperidin-3-yl]amino] hydrogen sulfate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'FPI-1465, bound form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAK SAI 5VW doub 1 n n CAD CAE 5VW sing 2 n n CAD N 5VW sing 3 n n CAE NAG 5VW sing 4 n n CAE CAF 5VW sing 5 n n NAG OAH 5VW sing 6 n n SAI OAH 5VW sing 7 n n SAI OAL 5VW doub 8 n n SAI OAJ 5VW sing 9 n n N CAP 5VW sing 10 n n N CA 5VW sing 11 n n CAF CB 5VW sing 12 n n CAP OAQ 5VW doub 13 n n O C 5VW doub 14 n n CB CA 5VW sing 15 n n CA C 5VW sing 16 n n C NAN 5VW sing 17 n n NAN OAR 5VW sing 18 n n OAR CAS 5VW sing 19 n n CAT CAS 5VW sing 20 n n CAT NAU 5VW sing 21 n n CAS CAW 5VW sing 22 n n NAU CAV 5VW sing 23 n n CAW CAV 5VW sing 24 n n NAG H23 5VW sing 25 n n CAE H4 5VW sing 26 n n CAF H5 5VW sing 27 n n CAF H6 5VW sing 28 n n CB H7 5VW sing 29 n n CB H8 5VW sing 30 n n CAD H9 5VW sing 31 n n CAD H10 5VW sing 32 n n CAP H2 5VW sing 33 n n CA H12 5VW sing 34 n n NAN H13 5VW sing 35 n n CAS H14 5VW sing 36 n n CAW H16 5VW sing 37 n n CAW H15 5VW sing 38 n n CAV H17 5VW sing 39 n n CAV H18 5VW sing 40 n n NAU HB6 5VW sing 41 n n CAT H22 5VW sing 42 n n CAT H21 5VW sing 43 n n OAJ H20 5VW sing 44 n n # _atom_sites.entry_id 5FAO _atom_sites.fract_transf_matrix[1][1] 0.022784 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005698 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 5VW A 1 301 1 5VW 465 . D 2 5VW B 1 301 1 5VW 465 . E 3 HOH A 1 401 24 HOH HOH . E 3 HOH A 2 402 50 HOH HOH . E 3 HOH A 3 403 27 HOH HOH . E 3 HOH A 4 404 52 HOH HOH . E 3 HOH A 5 405 55 HOH HOH . E 3 HOH A 6 406 51 HOH HOH . E 3 HOH A 7 407 15 HOH HOH . E 3 HOH A 8 408 6 HOH HOH . E 3 HOH A 9 409 26 HOH HOH . E 3 HOH A 10 410 48 HOH HOH . E 3 HOH A 11 411 47 HOH HOH . E 3 HOH A 12 412 56 HOH HOH . E 3 HOH A 13 413 43 HOH HOH . E 3 HOH A 14 414 2 HOH HOH . E 3 HOH A 15 415 49 HOH HOH . E 3 HOH A 16 416 54 HOH HOH . E 3 HOH A 17 417 11 HOH HOH . E 3 HOH A 18 418 17 HOH HOH . E 3 HOH A 19 419 3 HOH HOH . E 3 HOH A 20 420 53 HOH HOH . E 3 HOH A 21 421 35 HOH HOH . E 3 HOH A 22 422 38 HOH HOH . F 3 HOH B 1 401 36 HOH HOH . F 3 HOH B 2 402 44 HOH HOH . F 3 HOH B 3 403 37 HOH HOH . F 3 HOH B 4 404 46 HOH HOH . F 3 HOH B 5 405 40 HOH HOH . F 3 HOH B 6 406 41 HOH HOH . F 3 HOH B 7 407 28 HOH HOH . F 3 HOH B 8 408 39 HOH HOH . F 3 HOH B 9 409 29 HOH HOH . F 3 HOH B 10 410 45 HOH HOH . F 3 HOH B 11 411 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAL 5VW . . . D 2 -26.102 -10.023 4.749 1 43.65 ? OAL 5VW 301 B 1 HETATM 2 S SAI 5VW . . . D 2 -25.845 -9.497 6.06 1 46.41 ? SAI 5VW 301 B 1 HETATM 3 O OAJ 5VW . . . D 2 -26.53 -8.245 6.082 1 45.59 ? OAJ 5VW 301 B 1 HETATM 4 O OAK 5VW . . . D 2 -24.45 -9.14 6.035 1 47.87 ? OAK 5VW 301 B 1 HETATM 5 O OAH 5VW . . . D 2 -26.228 -10.437 7.194 1 49.12 ? OAH 5VW 301 B 1 HETATM 6 N NAG 5VW . . . D 2 -27.584 -10.306 7.41 1 50.22 ? NAG 5VW 301 B 1 HETATM 7 C CAE 5VW . . . D 2 -28.143 -11.576 7.696 1 50.1 ? CAE 5VW 301 B 1 HETATM 8 C CAF 5VW . . . D 2 -27.809 -12.546 6.562 1 50.51 ? CAF 5VW 301 B 1 HETATM 9 C CB 5VW . . . D 2 -28.48 -12.137 5.257 1 50.53 ? CB 5VW 301 B 1 HETATM 10 C CAD 5VW . . . D 2 -29.664 -11.435 7.861 1 51.35 ? CAD 5VW 301 B 1 HETATM 11 N N 5VW . . . D 2 -30.013 -10.944 6.542 1 52.49 ? N 5VW 301 B 1 HETATM 12 C CAP 5VW . . . D 2 -30.384 -9.671 6.375 1 51.48 ? CAP 5VW 301 B 1 HETATM 13 O OAQ 5VW . . . D 2 -30.684 -9.247 5.247 1 55.24 ? OAQ 5VW 301 B 1 HETATM 14 C CA 5VW . . . D 2 -29.955 -11.846 5.419 1 52.08 ? CA 5VW 301 B 1 HETATM 15 C C 5VW . . . D 2 -30.76 -13.097 5.652 1 55.27 ? C 5VW 301 B 1 HETATM 16 O O 5VW . . . D 2 -30.719 -13.648 6.719 1 56.62 ? O 5VW 301 B 1 HETATM 17 N NAN 5VW . . . D 2 -31.576 -13.632 4.603 1 60.27 ? NAN 5VW 301 B 1 HETATM 18 O OAR 5VW . . . D 2 -32.321 -14.793 4.822 1 63.95 ? OAR 5VW 301 B 1 HETATM 19 C CAS 5VW . . . D 2 -33.657 -14.642 4.251 1 63.86 ? CAS 5VW 301 B 1 HETATM 20 C CAW 5VW . . . D 2 -33.544 -14.313 2.822 1 63.13 ? CAW 5VW 301 B 1 HETATM 21 C CAV 5VW . . . D 2 -34.063 -15.571 2.066 1 62.2 ? CAV 5VW 301 B 1 HETATM 22 N NAU 5VW . . . D 2 -34.96 -16.241 3.083 1 61.51 ? NAU 5VW 301 B 1 HETATM 23 C CAT 5VW . . . D 2 -34.408 -15.913 4.402 1 61.98 ? CAT 5VW 301 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #