data_5FAP # _model_server_result.job_id Nj95VXvACeNK5Q7EmiDNVw _model_server_result.datetime_utc '2024-11-05 04:56:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fap # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 5FAP # _exptl.entry_id 5FAP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 365.363 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[[(3~{R},6~{S})-6-[(azetidin-3-ylcarbonylamino)carbamoyl]-1-methanoyl-piperidin-3-yl]amino] hydrogen sulfate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.98 _cell.angle_gamma 90 _cell.entry_id 5FAP _cell.length_a 63.12 _cell.length_b 61.83 _cell.length_c 73.07 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FAP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 45 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id CAM _struct_conn.ptnr2_label_comp_id 602 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 602 _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.213 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H19 N5 O7 S' _chem_comp.formula_weight 365.363 _chem_comp.id 602 _chem_comp.mon_nstd_flag . _chem_comp.name '[[(3~{R},6~{S})-6-[(azetidin-3-ylcarbonylamino)carbamoyl]-1-methanoyl-piperidin-3-yl]amino] hydrogen sulfate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAU CAS 602 doub 1 n n OAN CAM 602 doub 2 n n NAW CAV 602 sing 3 n n NAW CAX 602 sing 4 n n CAM N 602 sing 5 n n CAV CAT 602 sing 6 n n O C 602 doub 7 n n CAS CAT 602 sing 8 n n CAS NAR 602 sing 9 n n CAX CAT 602 sing 10 n n N CAD 602 sing 11 n n N CA 602 sing 12 n n C NAQ 602 sing 13 n n C CA 602 sing 14 n n NAR NAQ 602 sing 15 n n CAD CAE 602 sing 16 n n CA CB 602 sing 17 n n CAE CAF 602 sing 18 n n CAE NAG 602 sing 19 n n CB CAF 602 sing 20 n n OAL SAI 602 doub 21 n n OAH NAG 602 sing 22 n n OAH SAI 602 sing 23 n n SAI OAK 602 doub 24 n n SAI OAJ 602 sing 25 n n NAG H1 602 sing 26 n n CAE H2 602 sing 27 n n CAF H3 602 sing 28 n n CAF H4 602 sing 29 n n CB H5 602 sing 30 n n CB H6 602 sing 31 n n CAD H7 602 sing 32 n n CAD H8 602 sing 33 n n CAM H9 602 sing 34 n n CA H10 602 sing 35 n n NAQ H11 602 sing 36 n n NAR H12 602 sing 37 n n CAT H13 602 sing 38 n n CAV H14 602 sing 39 n n CAV H15 602 sing 40 n n NAW H16 602 sing 41 n n CAX H18 602 sing 42 n n CAX H19 602 sing 43 n n OAJ H20 602 sing 44 n n # _atom_sites.entry_id 5FAP _atom_sites.fract_transf_matrix[1][1] 0.015843 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003944 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016173 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014103 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 602 B 1 301 301 602 602 . D 2 602 A 1 301 301 602 602 . E 3 HOH B 1 401 401 HOH HOH . E 3 HOH B 2 402 402 HOH HOH . E 3 HOH B 3 403 403 HOH HOH . E 3 HOH B 4 404 404 HOH HOH . E 3 HOH B 5 405 405 HOH HOH . E 3 HOH B 6 406 406 HOH HOH . E 3 HOH B 7 407 407 HOH HOH . E 3 HOH B 8 408 408 HOH HOH . E 3 HOH B 9 409 409 HOH HOH . E 3 HOH B 10 410 410 HOH HOH . E 3 HOH B 11 411 411 HOH HOH . E 3 HOH B 12 412 412 HOH HOH . E 3 HOH B 13 413 413 HOH HOH . E 3 HOH B 14 414 414 HOH HOH . E 3 HOH B 15 415 415 HOH HOH . E 3 HOH B 16 416 416 HOH HOH . E 3 HOH B 17 417 417 HOH HOH . E 3 HOH B 18 418 418 HOH HOH . E 3 HOH B 19 419 419 HOH HOH . E 3 HOH B 20 420 420 HOH HOH . E 3 HOH B 21 421 421 HOH HOH . E 3 HOH B 22 422 422 HOH HOH . E 3 HOH B 23 423 423 HOH HOH . E 3 HOH B 24 424 424 HOH HOH . E 3 HOH B 25 425 425 HOH HOH . E 3 HOH B 26 426 426 HOH HOH . E 3 HOH B 27 427 427 HOH HOH . E 3 HOH B 28 428 428 HOH HOH . E 3 HOH B 29 429 429 HOH HOH . E 3 HOH B 30 430 430 HOH HOH . E 3 HOH B 31 431 431 HOH HOH . E 3 HOH B 32 432 432 HOH HOH . E 3 HOH B 33 433 433 HOH HOH . E 3 HOH B 34 434 434 HOH HOH . E 3 HOH B 35 435 435 HOH HOH . E 3 HOH B 36 436 436 HOH HOH . F 3 HOH A 1 401 401 HOH HOH . F 3 HOH A 2 402 402 HOH HOH . F 3 HOH A 3 403 403 HOH HOH . F 3 HOH A 4 404 404 HOH HOH . F 3 HOH A 5 405 405 HOH HOH . F 3 HOH A 6 406 406 HOH HOH . F 3 HOH A 7 407 407 HOH HOH . F 3 HOH A 8 408 408 HOH HOH . F 3 HOH A 9 409 409 HOH HOH . F 3 HOH A 10 410 410 HOH HOH . F 3 HOH A 11 411 411 HOH HOH . F 3 HOH A 12 412 412 HOH HOH . F 3 HOH A 13 413 413 HOH HOH . F 3 HOH A 14 414 414 HOH HOH . F 3 HOH A 15 415 415 HOH HOH . F 3 HOH A 16 416 416 HOH HOH . F 3 HOH A 17 417 417 HOH HOH . F 3 HOH A 18 418 418 HOH HOH . F 3 HOH A 19 419 419 HOH HOH . F 3 HOH A 20 420 420 HOH HOH . F 3 HOH A 21 421 421 HOH HOH . F 3 HOH A 22 422 422 HOH HOH . F 3 HOH A 23 423 423 HOH HOH . F 3 HOH A 24 424 424 HOH HOH . F 3 HOH A 25 425 425 HOH HOH . F 3 HOH A 26 426 426 HOH HOH . F 3 HOH A 27 427 430 HOH HOH . F 3 HOH A 28 428 427 HOH HOH . F 3 HOH A 29 429 428 HOH HOH . F 3 HOH A 30 430 429 HOH HOH . F 3 HOH A 31 431 431 HOH HOH . F 3 HOH A 32 432 432 HOH HOH . F 3 HOH A 33 433 433 HOH HOH . F 3 HOH A 34 434 434 HOH HOH . F 3 HOH A 35 435 435 HOH HOH . F 3 HOH A 36 436 437 HOH HOH . F 3 HOH A 37 437 438 HOH HOH . F 3 HOH A 38 438 439 HOH HOH . F 3 HOH A 39 439 440 HOH HOH . F 3 HOH A 40 440 436 HOH HOH . F 3 HOH A 41 441 441 HOH HOH . F 3 HOH A 42 442 442 HOH HOH . F 3 HOH A 43 443 443 HOH HOH . F 3 HOH A 44 444 444 HOH HOH . F 3 HOH A 45 445 445 HOH HOH . F 3 HOH A 46 446 446 HOH HOH . F 3 HOH A 47 447 447 HOH HOH . F 3 HOH A 48 448 448 HOH HOH . F 3 HOH A 49 449 449 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAL 602 . . . D 2 -3.151 -25.019 23.472 1 37.32 ? OAL 602 301 A 1 HETATM 2 S SAI 602 . . . D 2 -3.585 -25.894 24.442 1 35.65 ? SAI 602 301 A 1 HETATM 3 O OAJ 602 . . . D 2 -2.714 -25.938 25.514 1 37.39 ? OAJ 602 301 A 1 HETATM 4 O OAK 602 . . . D 2 -4.925 -25.887 24.7 1 35.05 ? OAK 602 301 A 1 HETATM 5 O OAH 602 . . . D 2 -3.224 -27.087 23.614 1 33.86 ? OAH 602 301 A 1 HETATM 6 N NAG 602 . . . D 2 -3.575 -28.285 23.973 1 31.67 ? NAG 602 301 A 1 HETATM 7 C CAE 602 . . . D 2 -2.736 -29.356 23.227 1 28.2 ? CAE 602 301 A 1 HETATM 8 C CAF 602 . . . D 2 -1.341 -29.391 23.768 1 27.69 ? CAF 602 301 A 1 HETATM 9 C CB 602 . . . D 2 -0.521 -28.206 23.301 1 28.02 ? CB 602 301 A 1 HETATM 10 C CAD 602 . . . D 2 -2.595 -29.392 21.712 1 26.15 ? CAD 602 301 A 1 HETATM 11 N N 602 . . . D 2 -1.812 -28.258 21.261 1 25.75 ? N 602 301 A 1 HETATM 12 C CAM 602 . . . D 2 -2.33 -27.3 20.402 1 23.75 ? CAM 602 301 A 1 HETATM 13 O OAN 602 . . . D 2 -1.636 -26.357 20.164 1 22.21 ? OAN 602 301 A 1 HETATM 14 C CA 602 . . . D 2 -0.457 -28.143 21.809 1 28.23 ? CA 602 301 A 1 HETATM 15 C C 602 . . . D 2 0.543 -29.227 21.417 1 28.57 ? C 602 301 A 1 HETATM 16 O O 602 . . . D 2 0.19 -30.205 20.795 1 28.6 ? O 602 301 A 1 HETATM 17 N NAQ 602 . . . D 2 1.804 -29.063 21.788 1 29.24 ? NAQ 602 301 A 1 HETATM 18 N NAR 602 . . . D 2 2.584 -30.188 21.706 1 31.78 ? NAR 602 301 A 1 HETATM 19 C CAS 602 . . . D 2 3.654 -30.302 20.922 1 32.54 ? CAS 602 301 A 1 HETATM 20 O OAU 602 . . . D 2 3.784 -29.636 19.924 1 30.3 ? OAU 602 301 A 1 HETATM 21 C CAT 602 . . . D 2 4.676 -31.317 21.322 1 34.76 ? CAT 602 301 A 1 HETATM 22 C CAV 602 . . . D 2 5.053 -32.555 20.476 1 35.56 ? CAV 602 301 A 1 HETATM 23 N NAW 602 . . . D 2 6.383 -31.931 20.173 1 34.95 ? NAW 602 301 A 1 HETATM 24 C CAX 602 . . . D 2 6.146 -30.859 21.197 1 35.18 ? CAX 602 301 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #