data_5FBA # _model_server_result.job_id 3jXWaHg5fhUcC-XJqTI2QQ _model_server_result.datetime_utc '2024-10-20 08:22:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fba # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5FBA # _exptl.entry_id 5FBA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.75 _cell.angle_gamma 90 _cell.entry_id 5FBA _cell.length_a 41.765 _cell.length_b 62.307 _cell.length_c 48.003 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FBA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 72 A CYS 92 1_555 A SG CYS 216 A CYS 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 A SG CYS 80 A CYS 100 1_555 A SG CYS 85 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? covale ? covale1 A ND2 ASN 228 A ASN 248 1_555 B C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? metalc ? metalc1 A N TRP 1 A TRP 21 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc2 A O TRP 1 A TRP 21 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc3 A NE2 HIS 6 A HIS 26 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc4 A OD1 ASP 45 A ASP 65 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc5 A ND1 HIS 60 A HIS 80 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc6 A NE2 HIS 115 A HIS 135 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc7 A OD1 ASP 119 A ASP 139 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc8 A OD2 ASP 119 A ASP 139 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc9 A NE2 HIS 125 A HIS 145 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc10 A NE2 HIS 148 A HIS 168 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc11 A OD1 ASP 152 A ASP 172 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? metalc ? metalc12 A OD2 ASP 152 A ASP 172 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc13 E ZN ZN . A ZN 401 1_555 F O1 PO4 . A PO4 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc14 E ZN ZN . A ZN 401 1_555 H O HOH . A HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc15 C ZN ZN . A ZN 402 1_555 F O1 PO4 . A PO4 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.859 ? metalc ? metalc16 C ZN ZN . A ZN 402 1_555 H O HOH . A HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc17 D ZN ZN . A ZN 403 1_555 F O3 PO4 . A PO4 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc18 D ZN ZN . A ZN 403 1_555 H O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc19 D ZN ZN . A ZN 403 1_555 H O HOH . A HOH 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5FBA _atom_sites.fract_transf_matrix[1][1] 0.023943 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007204 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01605 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021754 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 502 502 NAG NAG . C 3 ZN A 1 402 402 ZN ZN . D 3 ZN A 1 403 403 ZN ZN . E 3 ZN A 1 401 401 ZN ZN . F 4 PO4 A 1 601 601 PO4 PO4 . G 5 GOL A 1 701 701 GOL GOL . H 6 HOH A 1 802 802 HOH HOH . H 6 HOH A 2 801 801 HOH HOH . H 6 HOH A 3 1003 853 HOH HOH . H 6 HOH A 4 1004 974 HOH HOH . H 6 HOH A 5 1005 977 HOH HOH . H 6 HOH A 6 1006 866 HOH HOH . H 6 HOH A 7 1007 938 HOH HOH . H 6 HOH A 8 1008 843 HOH HOH . H 6 HOH A 9 1009 832 HOH HOH . H 6 HOH A 10 1010 881 HOH HOH . H 6 HOH A 11 1011 935 HOH HOH . H 6 HOH A 12 1012 963 HOH HOH . H 6 HOH A 13 1013 908 HOH HOH . H 6 HOH A 14 1014 847 HOH HOH . H 6 HOH A 15 1015 884 HOH HOH . H 6 HOH A 16 1016 868 HOH HOH . H 6 HOH A 17 1017 910 HOH HOH . H 6 HOH A 18 1018 919 HOH HOH . H 6 HOH A 19 1019 956 HOH HOH . H 6 HOH A 20 1020 949 HOH HOH . H 6 HOH A 21 1021 917 HOH HOH . H 6 HOH A 22 1022 854 HOH HOH . H 6 HOH A 23 1023 991 HOH HOH . H 6 HOH A 24 1024 844 HOH HOH . H 6 HOH A 25 1025 871 HOH HOH . H 6 HOH A 26 1026 944 HOH HOH . H 6 HOH A 27 1027 888 HOH HOH . H 6 HOH A 28 1028 835 HOH HOH . H 6 HOH A 29 1029 858 HOH HOH . H 6 HOH A 30 1030 922 HOH HOH . H 6 HOH A 31 1031 809 HOH HOH . H 6 HOH A 32 1032 874 HOH HOH . H 6 HOH A 33 1033 862 HOH HOH . H 6 HOH A 34 1034 885 HOH HOH . H 6 HOH A 35 1035 969 HOH HOH . H 6 HOH A 36 805 805 HOH HOH . H 6 HOH A 37 1037 856 HOH HOH . H 6 HOH A 38 803 803 HOH HOH . H 6 HOH A 39 1039 923 HOH HOH . H 6 HOH A 40 1040 839 HOH HOH . H 6 HOH A 41 1041 857 HOH HOH . H 6 HOH A 42 1042 873 HOH HOH . H 6 HOH A 43 1043 811 HOH HOH . H 6 HOH A 44 1044 921 HOH HOH . H 6 HOH A 45 1045 883 HOH HOH . H 6 HOH A 46 1046 899 HOH HOH . H 6 HOH A 47 1047 821 HOH HOH . H 6 HOH A 48 1048 897 HOH HOH . H 6 HOH A 49 1049 815 HOH HOH . H 6 HOH A 50 1050 879 HOH HOH . H 6 HOH A 51 1051 925 HOH HOH . H 6 HOH A 52 1052 846 HOH HOH . H 6 HOH A 53 1053 824 HOH HOH . H 6 HOH A 54 1054 972 HOH HOH . H 6 HOH A 55 1055 907 HOH HOH . H 6 HOH A 56 1056 860 HOH HOH . H 6 HOH A 57 1057 904 HOH HOH . H 6 HOH A 58 1058 889 HOH HOH . H 6 HOH A 59 1059 812 HOH HOH . H 6 HOH A 60 1060 894 HOH HOH . H 6 HOH A 61 1061 810 HOH HOH . H 6 HOH A 62 1062 828 HOH HOH . H 6 HOH A 63 1063 929 HOH HOH . H 6 HOH A 64 1064 836 HOH HOH . H 6 HOH A 65 1065 999 HOH HOH . H 6 HOH A 66 1066 842 HOH HOH . H 6 HOH A 67 1067 931 HOH HOH . H 6 HOH A 68 1068 914 HOH HOH . H 6 HOH A 69 1069 926 HOH HOH . H 6 HOH A 70 1070 855 HOH HOH . H 6 HOH A 71 1071 891 HOH HOH . H 6 HOH A 72 1072 840 HOH HOH . H 6 HOH A 73 1073 863 HOH HOH . H 6 HOH A 74 1074 952 HOH HOH . H 6 HOH A 75 1075 892 HOH HOH . H 6 HOH A 76 1076 983 HOH HOH . H 6 HOH A 77 1077 848 HOH HOH . H 6 HOH A 78 1078 893 HOH HOH . H 6 HOH A 79 1079 826 HOH HOH . H 6 HOH A 80 1080 930 HOH HOH . H 6 HOH A 81 1081 951 HOH HOH . H 6 HOH A 82 1082 825 HOH HOH . H 6 HOH A 83 1083 920 HOH HOH . H 6 HOH A 84 1084 887 HOH HOH . H 6 HOH A 85 1085 831 HOH HOH . H 6 HOH A 86 1086 1009 HOH HOH . H 6 HOH A 87 1087 1006 HOH HOH . H 6 HOH A 88 1088 877 HOH HOH . H 6 HOH A 89 1089 936 HOH HOH . H 6 HOH A 90 1090 960 HOH HOH . H 6 HOH A 91 1091 992 HOH HOH . H 6 HOH A 92 1092 898 HOH HOH . H 6 HOH A 93 1093 890 HOH HOH . H 6 HOH A 94 1094 816 HOH HOH . H 6 HOH A 95 1095 833 HOH HOH . H 6 HOH A 96 1096 948 HOH HOH . H 6 HOH A 97 1097 896 HOH HOH . H 6 HOH A 98 1098 851 HOH HOH . H 6 HOH A 99 1099 829 HOH HOH . H 6 HOH A 100 1100 823 HOH HOH . H 6 HOH A 101 1101 941 HOH HOH . H 6 HOH A 102 1102 875 HOH HOH . H 6 HOH A 103 1103 918 HOH HOH . H 6 HOH A 104 1104 990 HOH HOH . H 6 HOH A 105 1105 841 HOH HOH . H 6 HOH A 106 1106 965 HOH HOH . H 6 HOH A 107 1107 943 HOH HOH . H 6 HOH A 108 1108 1003 HOH HOH . H 6 HOH A 109 1109 814 HOH HOH . H 6 HOH A 110 1110 906 HOH HOH . H 6 HOH A 111 1111 820 HOH HOH . H 6 HOH A 112 1112 924 HOH HOH . H 6 HOH A 113 1113 966 HOH HOH . H 6 HOH A 114 1114 902 HOH HOH . H 6 HOH A 115 1115 813 HOH HOH . H 6 HOH A 116 1116 946 HOH HOH . H 6 HOH A 117 1117 895 HOH HOH . H 6 HOH A 118 1118 968 HOH HOH . H 6 HOH A 119 1119 909 HOH HOH . H 6 HOH A 120 1120 869 HOH HOH . H 6 HOH A 121 1121 852 HOH HOH . H 6 HOH A 122 1122 903 HOH HOH . H 6 HOH A 123 1123 988 HOH HOH . H 6 HOH A 124 1124 964 HOH HOH . H 6 HOH A 125 1125 959 HOH HOH . H 6 HOH A 126 1126 927 HOH HOH . H 6 HOH A 127 1127 970 HOH HOH . H 6 HOH A 128 1128 950 HOH HOH . H 6 HOH A 129 1129 882 HOH HOH . H 6 HOH A 130 1130 971 HOH HOH . H 6 HOH A 131 1131 838 HOH HOH . H 6 HOH A 132 1132 806 HOH HOH . H 6 HOH A 133 1133 807 HOH HOH . H 6 HOH A 134 1134 954 HOH HOH . H 6 HOH A 135 1135 865 HOH HOH . H 6 HOH A 136 1136 1004 HOH HOH . H 6 HOH A 137 1137 818 HOH HOH . H 6 HOH A 138 1138 886 HOH HOH . H 6 HOH A 139 1139 945 HOH HOH . H 6 HOH A 140 1140 913 HOH HOH . H 6 HOH A 141 1141 845 HOH HOH . H 6 HOH A 142 1142 953 HOH HOH . H 6 HOH A 143 1143 822 HOH HOH . H 6 HOH A 144 1144 955 HOH HOH . H 6 HOH A 145 1145 849 HOH HOH . H 6 HOH A 146 1146 1014 HOH HOH . H 6 HOH A 147 1147 916 HOH HOH . H 6 HOH A 148 1148 915 HOH HOH . H 6 HOH A 149 1149 830 HOH HOH . H 6 HOH A 150 1150 850 HOH HOH . H 6 HOH A 151 1151 1015 HOH HOH . H 6 HOH A 152 1152 976 HOH HOH . H 6 HOH A 153 1153 967 HOH HOH . H 6 HOH A 154 1154 942 HOH HOH . H 6 HOH A 155 1155 819 HOH HOH . H 6 HOH A 156 1156 939 HOH HOH . H 6 HOH A 157 1157 872 HOH HOH . H 6 HOH A 158 1158 859 HOH HOH . H 6 HOH A 159 1159 870 HOH HOH . H 6 HOH A 160 1160 958 HOH HOH . H 6 HOH A 161 1161 808 HOH HOH . H 6 HOH A 162 1162 1005 HOH HOH . H 6 HOH A 163 1163 864 HOH HOH . H 6 HOH A 164 1164 827 HOH HOH . H 6 HOH A 165 1165 987 HOH HOH . H 6 HOH A 166 1166 957 HOH HOH . H 6 HOH A 167 1167 837 HOH HOH . H 6 HOH A 168 1168 997 HOH HOH . H 6 HOH A 169 1169 962 HOH HOH . H 6 HOH A 170 1170 986 HOH HOH . H 6 HOH A 171 1171 901 HOH HOH . H 6 HOH A 172 1172 834 HOH HOH . H 6 HOH A 173 1173 876 HOH HOH . H 6 HOH A 174 1174 937 HOH HOH . H 6 HOH A 175 1175 911 HOH HOH . H 6 HOH A 176 1176 989 HOH HOH . H 6 HOH A 177 1177 984 HOH HOH . H 6 HOH A 178 1178 1010 HOH HOH . H 6 HOH A 179 1179 982 HOH HOH . H 6 HOH A 180 1180 861 HOH HOH . H 6 HOH A 181 1181 934 HOH HOH . H 6 HOH A 182 1182 900 HOH HOH . H 6 HOH A 183 1183 880 HOH HOH . H 6 HOH A 184 1184 1002 HOH HOH . H 6 HOH A 185 1185 1012 HOH HOH . H 6 HOH A 186 1186 932 HOH HOH . H 6 HOH A 187 1187 973 HOH HOH . H 6 HOH A 188 1188 928 HOH HOH . H 6 HOH A 189 1189 1008 HOH HOH . H 6 HOH A 190 1190 933 HOH HOH . H 6 HOH A 191 1191 905 HOH HOH . H 6 HOH A 192 1192 998 HOH HOH . H 6 HOH A 193 1193 975 HOH HOH . H 6 HOH A 194 1194 994 HOH HOH . H 6 HOH A 195 1195 878 HOH HOH . H 6 HOH A 196 1196 1013 HOH HOH . H 6 HOH A 197 1197 995 HOH HOH . H 6 HOH A 198 1198 961 HOH HOH . H 6 HOH A 199 1199 947 HOH HOH . H 6 HOH A 200 1200 996 HOH HOH . H 6 HOH A 201 1201 912 HOH HOH . H 6 HOH A 202 1202 1007 HOH HOH . H 6 HOH A 203 1203 817 HOH HOH . H 6 HOH A 204 1204 940 HOH HOH . H 6 HOH A 205 1205 985 HOH HOH . H 6 HOH A 206 1206 1000 HOH HOH . H 6 HOH A 207 1207 978 HOH HOH . H 6 HOH A 208 1208 867 HOH HOH . H 6 HOH A 209 1209 993 HOH HOH . H 6 HOH A 210 1210 981 HOH HOH . H 6 HOH A 211 1211 1011 HOH HOH . H 6 HOH A 212 1212 979 HOH HOH . H 6 HOH A 213 1213 1001 HOH HOH . H 6 HOH A 214 1214 980 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 20.933 _atom_site.Cartn_y -5.831 _atom_site.Cartn_z -0.247 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.99 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #