data_5FBI # _model_server_result.job_id 6KV7BHfPNQsIZCbJ_JiE8g _model_server_result.datetime_utc '2025-01-10 23:05:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fbi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5FBI # _exptl.entry_id 5FBI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 310.304 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[(2-aminocarbonyl-1~{H}-indol-5-yl)oxymethyl]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.35 _cell.angle_gamma 90 _cell.entry_id 5FBI _cell.length_a 55.067 _cell.length_b 50.655 _cell.length_c 39.326 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FBI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 42 1_555 A SG CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 123 A CYS 136 1_555 A SG CYS 189 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 A SG CYS 154 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 A SG CYS 179 A CYS 191 1_555 A SG CYS 204 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'C17 H14 N2 O4' _chem_comp.formula_weight 310.304 _chem_comp.id 5WD _chem_comp.mon_nstd_flag . _chem_comp.name '3-[(2-aminocarbonyl-1~{H}-indol-5-yl)oxymethyl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C16 5WD doub 1 n y C17 C18 5WD sing 2 n y C16 C15 5WD sing 3 n y C18 C19 5WD doub 4 n y N11 C10 5WD sing 5 n n C9 C8 5WD doub 6 n y C9 C5 5WD sing 7 n y C10 C8 5WD sing 8 n n C10 O12 5WD doub 9 n n C4 C5 5WD doub 10 n y C4 C1 5WD sing 11 n y C15 C14 5WD sing 12 n n C15 C20 5WD doub 13 n y C8 N7 5WD sing 14 n y C5 C6 5WD sing 15 n y O13 C1 5WD sing 16 n n O13 C14 5WD sing 17 n n C1 C2 5WD doub 18 n y N7 C6 5WD sing 19 n y C6 C3 5WD doub 20 n y C19 C20 5WD sing 21 n y C19 C21 5WD sing 22 n n C2 C3 5WD sing 23 n y O23 C21 5WD doub 24 n n C21 O22 5WD sing 25 n n C2 H1 5WD sing 26 n n C3 H2 5WD sing 27 n n C14 H3 5WD sing 28 n n C14 H4 5WD sing 29 n n C16 H5 5WD sing 30 n n C17 H6 5WD sing 31 n n C18 H7 5WD sing 32 n n C20 H8 5WD sing 33 n n C4 H9 5WD sing 34 n n N7 H10 5WD sing 35 n n C9 H11 5WD sing 36 n n N11 H12 5WD sing 37 n n N11 H13 5WD sing 38 n n O22 H14 5WD sing 39 n n # _atom_sites.entry_id 5FBI _atom_sites.fract_transf_matrix[1][1] 0.01816 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004985 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019741 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026369 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 244 GOL GOL . C 3 5WD A 1 302 1 5WD LI1 . D 4 HOH A 1 401 164 HOH HOH . D 4 HOH A 2 402 157 HOH HOH . D 4 HOH A 3 403 18 HOH HOH . D 4 HOH A 4 404 159 HOH HOH . D 4 HOH A 5 405 48 HOH HOH . D 4 HOH A 6 406 16 HOH HOH . D 4 HOH A 7 407 109 HOH HOH . D 4 HOH A 8 408 100 HOH HOH . D 4 HOH A 9 409 91 HOH HOH . D 4 HOH A 10 410 32 HOH HOH . D 4 HOH A 11 411 12 HOH HOH . D 4 HOH A 12 412 27 HOH HOH . D 4 HOH A 13 413 50 HOH HOH . D 4 HOH A 14 414 4 HOH HOH . D 4 HOH A 15 415 87 HOH HOH . D 4 HOH A 16 416 73 HOH HOH . D 4 HOH A 17 417 10 HOH HOH . D 4 HOH A 18 418 78 HOH HOH . D 4 HOH A 19 419 30 HOH HOH . D 4 HOH A 20 420 6 HOH HOH . D 4 HOH A 21 421 145 HOH HOH . D 4 HOH A 22 422 22 HOH HOH . D 4 HOH A 23 423 24 HOH HOH . D 4 HOH A 24 424 123 HOH HOH . D 4 HOH A 25 425 74 HOH HOH . D 4 HOH A 26 426 88 HOH HOH . D 4 HOH A 27 427 63 HOH HOH . D 4 HOH A 28 428 83 HOH HOH . D 4 HOH A 29 429 21 HOH HOH . D 4 HOH A 30 430 97 HOH HOH . D 4 HOH A 31 431 133 HOH HOH . D 4 HOH A 32 432 132 HOH HOH . D 4 HOH A 33 433 82 HOH HOH . D 4 HOH A 34 434 129 HOH HOH . D 4 HOH A 35 435 8 HOH HOH . D 4 HOH A 36 436 3 HOH HOH . D 4 HOH A 37 437 77 HOH HOH . D 4 HOH A 38 438 55 HOH HOH . D 4 HOH A 39 439 162 HOH HOH . D 4 HOH A 40 440 137 HOH HOH . D 4 HOH A 41 441 141 HOH HOH . D 4 HOH A 42 442 57 HOH HOH . D 4 HOH A 43 443 144 HOH HOH . D 4 HOH A 44 444 49 HOH HOH . D 4 HOH A 45 445 108 HOH HOH . D 4 HOH A 46 446 119 HOH HOH . D 4 HOH A 47 447 31 HOH HOH . D 4 HOH A 48 448 23 HOH HOH . D 4 HOH A 49 449 26 HOH HOH . D 4 HOH A 50 450 92 HOH HOH . D 4 HOH A 51 451 152 HOH HOH . D 4 HOH A 52 452 158 HOH HOH . D 4 HOH A 53 453 9 HOH HOH . D 4 HOH A 54 454 43 HOH HOH . D 4 HOH A 55 455 36 HOH HOH . D 4 HOH A 56 456 116 HOH HOH . D 4 HOH A 57 457 5 HOH HOH . D 4 HOH A 58 458 25 HOH HOH . D 4 HOH A 59 459 29 HOH HOH . D 4 HOH A 60 460 124 HOH HOH . D 4 HOH A 61 461 1 HOH HOH . D 4 HOH A 62 462 154 HOH HOH . D 4 HOH A 63 463 52 HOH HOH . D 4 HOH A 64 464 47 HOH HOH . D 4 HOH A 65 465 110 HOH HOH . D 4 HOH A 66 466 20 HOH HOH . D 4 HOH A 67 467 7 HOH HOH . D 4 HOH A 68 468 40 HOH HOH . D 4 HOH A 69 469 2 HOH HOH . D 4 HOH A 70 470 98 HOH HOH . D 4 HOH A 71 471 19 HOH HOH . D 4 HOH A 72 472 46 HOH HOH . D 4 HOH A 73 473 80 HOH HOH . D 4 HOH A 74 474 127 HOH HOH . D 4 HOH A 75 475 151 HOH HOH . D 4 HOH A 76 476 112 HOH HOH . D 4 HOH A 77 477 130 HOH HOH . D 4 HOH A 78 478 66 HOH HOH . D 4 HOH A 79 479 64 HOH HOH . D 4 HOH A 80 480 84 HOH HOH . D 4 HOH A 81 481 11 HOH HOH . D 4 HOH A 82 482 122 HOH HOH . D 4 HOH A 83 483 71 HOH HOH . D 4 HOH A 84 484 60 HOH HOH . D 4 HOH A 85 485 13 HOH HOH . D 4 HOH A 86 486 45 HOH HOH . D 4 HOH A 87 487 69 HOH HOH . D 4 HOH A 88 488 76 HOH HOH . D 4 HOH A 89 489 94 HOH HOH . D 4 HOH A 90 490 138 HOH HOH . D 4 HOH A 91 491 14 HOH HOH . D 4 HOH A 92 492 155 HOH HOH . D 4 HOH A 93 493 143 HOH HOH . D 4 HOH A 94 494 44 HOH HOH . D 4 HOH A 95 495 67 HOH HOH . D 4 HOH A 96 496 33 HOH HOH . D 4 HOH A 97 497 93 HOH HOH . D 4 HOH A 98 498 115 HOH HOH . D 4 HOH A 99 499 101 HOH HOH . D 4 HOH A 100 500 136 HOH HOH . D 4 HOH A 101 501 62 HOH HOH . D 4 HOH A 102 502 147 HOH HOH . D 4 HOH A 103 503 134 HOH HOH . D 4 HOH A 104 504 99 HOH HOH . D 4 HOH A 105 505 160 HOH HOH . D 4 HOH A 106 506 39 HOH HOH . D 4 HOH A 107 507 59 HOH HOH . D 4 HOH A 108 508 161 HOH HOH . D 4 HOH A 109 509 146 HOH HOH . D 4 HOH A 110 510 28 HOH HOH . D 4 HOH A 111 511 95 HOH HOH . D 4 HOH A 112 512 35 HOH HOH . D 4 HOH A 113 513 51 HOH HOH . D 4 HOH A 114 514 104 HOH HOH . D 4 HOH A 115 515 72 HOH HOH . D 4 HOH A 116 516 56 HOH HOH . D 4 HOH A 117 517 102 HOH HOH . D 4 HOH A 118 518 96 HOH HOH . D 4 HOH A 119 519 75 HOH HOH . D 4 HOH A 120 520 37 HOH HOH . D 4 HOH A 121 521 34 HOH HOH . D 4 HOH A 122 522 38 HOH HOH . D 4 HOH A 123 523 17 HOH HOH . D 4 HOH A 124 524 128 HOH HOH . D 4 HOH A 125 525 113 HOH HOH . D 4 HOH A 126 526 68 HOH HOH . D 4 HOH A 127 527 42 HOH HOH . D 4 HOH A 128 528 81 HOH HOH . D 4 HOH A 129 529 86 HOH HOH . D 4 HOH A 130 530 126 HOH HOH . D 4 HOH A 131 531 111 HOH HOH . D 4 HOH A 132 532 61 HOH HOH . D 4 HOH A 133 533 70 HOH HOH . D 4 HOH A 134 534 41 HOH HOH . D 4 HOH A 135 535 15 HOH HOH . D 4 HOH A 136 536 58 HOH HOH . D 4 HOH A 137 537 118 HOH HOH . D 4 HOH A 138 538 79 HOH HOH . D 4 HOH A 139 539 85 HOH HOH . D 4 HOH A 140 540 165 HOH HOH . D 4 HOH A 141 541 131 HOH HOH . D 4 HOH A 142 542 114 HOH HOH . D 4 HOH A 143 543 54 HOH HOH . D 4 HOH A 144 544 163 HOH HOH . D 4 HOH A 145 545 89 HOH HOH . D 4 HOH A 146 546 156 HOH HOH . D 4 HOH A 147 547 65 HOH HOH . D 4 HOH A 148 548 140 HOH HOH . D 4 HOH A 149 549 149 HOH HOH . D 4 HOH A 150 550 121 HOH HOH . D 4 HOH A 151 551 107 HOH HOH . D 4 HOH A 152 552 142 HOH HOH . D 4 HOH A 153 553 125 HOH HOH . D 4 HOH A 154 554 90 HOH HOH . D 4 HOH A 155 555 139 HOH HOH . D 4 HOH A 156 556 153 HOH HOH . D 4 HOH A 157 557 106 HOH HOH . D 4 HOH A 158 558 103 HOH HOH . D 4 HOH A 159 559 148 HOH HOH . D 4 HOH A 160 560 117 HOH HOH . D 4 HOH A 161 561 135 HOH HOH . D 4 HOH A 162 562 53 HOH HOH . D 4 HOH A 163 563 150 HOH HOH . D 4 HOH A 164 564 105 HOH HOH . D 4 HOH A 165 565 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 5WD . . . C 3 3.414 10.04 1.794 1 52.68 ? C1 5WD 302 A 1 HETATM 2 C C2 5WD . . . C 3 2.123 9.594 2.205 1 49.36 ? C2 5WD 302 A 1 HETATM 3 C C3 5WD . . . C 3 1.798 8.212 2.285 1 46.04 ? C3 5WD 302 A 1 HETATM 4 C C14 5WD . . . C 3 5.182 11.79 1.96 1 64.39 ? C14 5WD 302 A 1 HETATM 5 C C15 5WD . . . C 3 5.51 13.224 1.528 1 68.89 ? C15 5WD 302 A 1 HETATM 6 C C16 5WD . . . C 3 5.915 13.486 0.206 1 70.73 ? C16 5WD 302 A 1 HETATM 7 C C17 5WD . . . C 3 6.248 14.797 -0.175 1 71.77 ? C17 5WD 302 A 1 HETATM 8 C C18 5WD . . . C 3 6.238 15.841 0.768 1 71.66 ? C18 5WD 302 A 1 HETATM 9 C C19 5WD . . . C 3 5.884 15.581 2.104 1 71.18 ? C19 5WD 302 A 1 HETATM 10 C C20 5WD . . . C 3 5.543 14.264 2.479 1 70.48 ? C20 5WD 302 A 1 HETATM 11 C C21 5WD . . . C 3 5.88 16.704 3.12 1 70.58 ? C21 5WD 302 A 1 HETATM 12 C C4 5WD . . . C 3 4.388 9.077 1.465 1 46.68 ? C4 5WD 302 A 1 HETATM 13 C C5 5WD . . . C 3 4.055 7.728 1.551 1 41.64 ? C5 5WD 302 A 1 HETATM 14 C C6 5WD . . . C 3 2.805 7.281 1.945 1 42.63 ? C6 5WD 302 A 1 HETATM 15 N N7 5WD . . . C 3 2.804 5.918 1.923 1 39.25 ? N7 5WD 302 A 1 HETATM 16 C C8 5WD . . . C 3 3.986 5.453 1.551 1 36.9 ? C8 5WD 302 A 1 HETATM 17 C C9 5WD . . . C 3 4.822 6.468 1.31 1 37.63 ? C9 5WD 302 A 1 HETATM 18 C C10 5WD . . . C 3 4.439 4.056 1.402 1 34.29 ? C10 5WD 302 A 1 HETATM 19 N N11 5WD . . . C 3 5.718 3.735 1.115 1 33.59 ? N11 5WD 302 A 1 HETATM 20 O O12 5WD . . . C 3 3.61 3.183 1.57 1 37.36 ? O12 5WD 302 A 1 HETATM 21 O O13 5WD . . . C 3 3.814 11.399 1.693 1 59.42 ? O13 5WD 302 A 1 HETATM 22 O O22 5WD . . . C 3 6.762 16.685 4.124 1 70.7 ? O22 5WD 302 A 1 HETATM 23 O O23 5WD . . . C 3 5.076 17.616 3.012 1 70.32 ? O23 5WD 302 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 700 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 23 #