data_5FBO # _model_server_result.job_id lq4rgW8wik31HyDRCJ7Gmg _model_server_result.datetime_utc '2024-11-22 06:53:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fbo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 5FBO # _exptl.entry_id 5FBO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 581.564 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 4-[8-azanyl-3-[(3~{R},6~{S})-1-cyclopropylcarbonyl-6-methyl-piperidin-3-yl]imidazo[1,5-a]pyrazin-1-yl]-3-fluoranyl-~{N}-[4-(trifluoromethyl)pyridin-2-yl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec 2.7.10.2 # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5FBO _cell.length_a 72.39 _cell.length_b 104.47 _cell.length_c 38.08 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FBO _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H27 F4 N7 O2' _chem_comp.formula_weight 581.564 _chem_comp.id 5WH _chem_comp.mon_nstd_flag . _chem_comp.name 4-[8-azanyl-3-[(3~{R},6~{S})-1-cyclopropylcarbonyl-6-methyl-piperidin-3-yl]imidazo[1,5-a]pyrazin-1-yl]-3-fluoranyl-~{N}-[4-(trifluoromethyl)pyridin-2-yl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C41 C42 5WH sing 72 n n C41 C40 5WH sing 73 n n C42 C40 5WH sing 74 n n O39 C38 5WH doub 75 n n C40 C38 5WH sing 76 n n C38 N15 5WH sing 77 n n C02 C03 5WH doub 78 n y C02 N01 5WH sing 79 n y C03 N06 5WH sing 80 n y N15 C12 5WH sing 81 n n N15 C14 5WH sing 82 n n N01 C04 5WH doub 83 n y C12 C10 5WH sing 84 n n C14 C13 5WH sing 85 n n C14 C37 5WH sing 86 n n C10 C07 5WH sing 87 n n C10 C16 5WH sing 88 n n N06 C07 5WH sing 89 n y N06 C05 5WH sing 90 n y C13 C16 5WH sing 91 n n C04 C05 5WH sing 92 n y C04 N11 5WH sing 93 n n C07 N08 5WH doub 94 n y C05 C09 5WH doub 95 n y N08 C09 5WH sing 96 n y C09 C17 5WH sing 97 n n F23 C18 5WH sing 98 n n C17 C18 5WH doub 99 n y C17 C22 5WH sing 100 n y C18 C19 5WH sing 101 n y C22 C21 5WH doub 102 n y C19 C20 5WH doub 103 n y C21 C20 5WH sing 104 n y C20 C24 5WH sing 105 n n C24 O25 5WH doub 106 n n C24 N26 5WH sing 107 n n N26 C27 5WH sing 108 n n C27 N28 5WH doub 109 n y C27 C32 5WH sing 110 n y N28 C29 5WH sing 111 n y C32 C31 5WH doub 112 n y C29 C30 5WH doub 113 n y C31 C30 5WH sing 114 n y C31 C33 5WH sing 115 n n F34 C33 5WH sing 116 n n C33 F35 5WH sing 117 n n C33 F36 5WH sing 118 n n C02 H1 5WH sing 119 n n C03 H2 5WH sing 120 n n C10 H3 5WH sing 121 n n N11 H4 5WH sing 122 n n N11 H5 5WH sing 123 n n C12 H6 5WH sing 124 n n C12 H7 5WH sing 125 n n C13 H8 5WH sing 126 n n C13 H9 5WH sing 127 n n C14 H10 5WH sing 128 n n C16 H11 5WH sing 129 n n C16 H12 5WH sing 130 n n C19 H13 5WH sing 131 n n C21 H14 5WH sing 132 n n C22 H15 5WH sing 133 n n N26 H16 5WH sing 134 n n C29 H17 5WH sing 135 n n C30 H18 5WH sing 136 n n C32 H19 5WH sing 137 n n C37 H20 5WH sing 138 n n C37 H21 5WH sing 139 n n C37 H22 5WH sing 140 n n C40 H23 5WH sing 141 n n C41 H24 5WH sing 142 n n C41 H25 5WH sing 143 n n C42 H26 5WH sing 144 n n C42 H27 5WH sing 145 n n # _atom_sites.entry_id 5FBO _atom_sites.fract_transf_matrix[1][1] 0.013814 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009572 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026261 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5WH A 1 1001 1001 5WH 5WH . C 3 5WE A 1 1002 1002 5WE 5WE . D 4 HOH A 1 1101 1101 HOH HOH . D 4 HOH A 2 1102 1102 HOH HOH . D 4 HOH A 3 1103 1103 HOH HOH . D 4 HOH A 4 1104 1104 HOH HOH . D 4 HOH A 5 1105 1105 HOH HOH . D 4 HOH A 6 1106 1106 HOH HOH . D 4 HOH A 7 1107 1107 HOH HOH . D 4 HOH A 8 1108 1108 HOH HOH . D 4 HOH A 9 1109 1109 HOH HOH . D 4 HOH A 10 1110 1110 HOH HOH . D 4 HOH A 11 1111 1111 HOH HOH . D 4 HOH A 12 1112 1112 HOH HOH . D 4 HOH A 13 1113 1113 HOH HOH . D 4 HOH A 14 1114 1114 HOH HOH . D 4 HOH A 15 1115 1115 HOH HOH . D 4 HOH A 16 1116 1116 HOH HOH . D 4 HOH A 17 1117 1117 HOH HOH . D 4 HOH A 18 1118 1118 HOH HOH . D 4 HOH A 19 1119 1119 HOH HOH . D 4 HOH A 20 1120 1120 HOH HOH . D 4 HOH A 21 1121 1121 HOH HOH . D 4 HOH A 22 1122 1122 HOH HOH . D 4 HOH A 23 1123 1123 HOH HOH . D 4 HOH A 24 1124 1124 HOH HOH . D 4 HOH A 25 1125 1125 HOH HOH . D 4 HOH A 26 1126 1126 HOH HOH . D 4 HOH A 27 1127 1127 HOH HOH . D 4 HOH A 28 1128 1128 HOH HOH . D 4 HOH A 29 1129 1129 HOH HOH . D 4 HOH A 30 1130 1130 HOH HOH . D 4 HOH A 31 1131 1131 HOH HOH . D 4 HOH A 32 1132 1132 HOH HOH . D 4 HOH A 33 1133 1133 HOH HOH . D 4 HOH A 34 1134 1134 HOH HOH . D 4 HOH A 35 1135 1135 HOH HOH . D 4 HOH A 36 1136 1136 HOH HOH . D 4 HOH A 37 1137 1137 HOH HOH . D 4 HOH A 38 1138 1138 HOH HOH . D 4 HOH A 39 1139 1139 HOH HOH . D 4 HOH A 40 1140 1140 HOH HOH . D 4 HOH A 41 1141 1141 HOH HOH . D 4 HOH A 42 1142 1142 HOH HOH . D 4 HOH A 43 1143 1143 HOH HOH . D 4 HOH A 44 1144 1144 HOH HOH . D 4 HOH A 45 1145 1145 HOH HOH . D 4 HOH A 46 1146 1146 HOH HOH . D 4 HOH A 47 1147 1147 HOH HOH . D 4 HOH A 48 1148 1148 HOH HOH . D 4 HOH A 49 1149 1149 HOH HOH . D 4 HOH A 50 1150 1150 HOH HOH . D 4 HOH A 51 1151 1151 HOH HOH . D 4 HOH A 52 1152 1152 HOH HOH . D 4 HOH A 53 1153 1153 HOH HOH . D 4 HOH A 54 1154 1154 HOH HOH . D 4 HOH A 55 1155 1155 HOH HOH . D 4 HOH A 56 1156 1156 HOH HOH . D 4 HOH A 57 1157 1157 HOH HOH . D 4 HOH A 58 1158 1158 HOH HOH . D 4 HOH A 59 1159 1159 HOH HOH . D 4 HOH A 60 1160 1160 HOH HOH . D 4 HOH A 61 1161 1161 HOH HOH . D 4 HOH A 62 1162 1162 HOH HOH . D 4 HOH A 63 1163 1163 HOH HOH . D 4 HOH A 64 1164 1164 HOH HOH . D 4 HOH A 65 1165 1165 HOH HOH . D 4 HOH A 66 1166 1166 HOH HOH . D 4 HOH A 67 1167 1167 HOH HOH . D 4 HOH A 68 1168 1168 HOH HOH . D 4 HOH A 69 1169 1169 HOH HOH . D 4 HOH A 70 1170 1170 HOH HOH . D 4 HOH A 71 1171 1171 HOH HOH . D 4 HOH A 72 1172 1172 HOH HOH . D 4 HOH A 73 1173 1173 HOH HOH . D 4 HOH A 74 1174 1174 HOH HOH . D 4 HOH A 75 1175 1175 HOH HOH . D 4 HOH A 76 1176 1176 HOH HOH . D 4 HOH A 77 1177 1177 HOH HOH . D 4 HOH A 78 1178 1178 HOH HOH . D 4 HOH A 79 1179 1179 HOH HOH . D 4 HOH A 80 1180 1180 HOH HOH . D 4 HOH A 81 1181 1181 HOH HOH . D 4 HOH A 82 1182 1182 HOH HOH . D 4 HOH A 83 1183 1183 HOH HOH . D 4 HOH A 84 1184 1184 HOH HOH . D 4 HOH A 85 1185 1185 HOH HOH . D 4 HOH A 86 1186 1186 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 5WH . . . B 2 -21.092 4.872 -19.542 1 30.64 ? N01 5WH 1001 A 1 HETATM 2 C C02 5WH . . . B 2 -20.14 5.124 -20.448 1 28.12 ? C02 5WH 1001 A 1 HETATM 3 C C03 5WH . . . B 2 -18.909 5.624 -20.1 1 27.65 ? C03 5WH 1001 A 1 HETATM 4 C C04 5WH . . . B 2 -20.884 5.065 -18.243 1 31.48 ? C04 5WH 1001 A 1 HETATM 5 C C05 5WH . . . B 2 -19.615 5.559 -17.77 1 30 ? C05 5WH 1001 A 1 HETATM 6 N N06 5WH . . . B 2 -18.674 5.88 -18.752 1 28.03 ? N06 5WH 1001 A 1 HETATM 7 C C07 5WH . . . B 2 -17.535 6.304 -18.127 1 32.49 ? C07 5WH 1001 A 1 HETATM 8 N N08 5WH . . . B 2 -17.759 6.351 -16.805 1 33.97 ? N08 5WH 1001 A 1 HETATM 9 C C09 5WH . . . B 2 -19.035 5.898 -16.597 1 32.47 ? C09 5WH 1001 A 1 HETATM 10 C C10 5WH . . . B 2 -16.277 6.706 -18.832 1 38.34 ? C10 5WH 1001 A 1 HETATM 11 N N11 5WH . . . B 2 -21.919 4.768 -17.416 1 31.31 ? N11 5WH 1001 A 1 HETATM 12 C C12 5WH . . . B 2 -16.384 8.197 -19.183 1 42.46 ? C12 5WH 1001 A 1 HETATM 13 C C13 5WH . . . B 2 -13.791 7.031 -18.623 1 45.36 ? C13 5WH 1001 A 1 HETATM 14 C C14 5WH . . . B 2 -13.943 8.5 -19.002 1 45.95 ? C14 5WH 1001 A 1 HETATM 15 N N15 5WH . . . B 2 -15.167 8.654 -19.878 1 44.59 ? N15 5WH 1001 A 1 HETATM 16 C C16 5WH . . . B 2 -15.04 6.45 -17.965 1 44.2 ? C16 5WH 1001 A 1 HETATM 17 C C17 5WH . . . B 2 -19.496 5.802 -15.273 1 39.95 ? C17 5WH 1001 A 1 HETATM 18 C C18 5WH . . . B 2 -19.755 4.599 -14.64 1 46.13 ? C18 5WH 1001 A 1 HETATM 19 C C19 5WH . . . B 2 -20.194 4.5 -13.348 1 47.67 ? C19 5WH 1001 A 1 HETATM 20 C C20 5WH . . . B 2 -20.362 5.666 -12.604 1 51.51 ? C20 5WH 1001 A 1 HETATM 21 C C21 5WH . . . B 2 -20.033 6.888 -13.183 1 47.01 ? C21 5WH 1001 A 1 HETATM 22 C C22 5WH . . . B 2 -19.63 6.958 -14.503 1 45.08 ? C22 5WH 1001 A 1 HETATM 23 F F23 5WH . . . B 2 -19.643 3.451 -15.354 1 50.7 ? F23 5WH 1001 A 1 HETATM 24 C C24 5WH . . . B 2 -20.742 5.492 -11.166 1 60.3 ? C24 5WH 1001 A 1 HETATM 25 O O25 5WH . . . B 2 -20.732 4.381 -10.647 1 59.62 ? O25 5WH 1001 A 1 HETATM 26 N N26 5WH . . . B 2 -21.039 6.623 -10.48 1 71.02 ? N26 5WH 1001 A 1 HETATM 27 C C27 5WH . . . B 2 -21.275 6.772 -9.104 1 78.55 ? C27 5WH 1001 A 1 HETATM 28 N N28 5WH . . . B 2 -21.819 7.968 -8.819 1 81.67 ? N28 5WH 1001 A 1 HETATM 29 C C29 5WH . . . B 2 -22.088 8.232 -7.531 1 84.11 ? C29 5WH 1001 A 1 HETATM 30 C C30 5WH . . . B 2 -21.846 7.342 -6.51 1 85.34 ? C30 5WH 1001 A 1 HETATM 31 C C31 5WH . . . B 2 -21.273 6.112 -6.797 1 86.56 ? C31 5WH 1001 A 1 HETATM 32 C C32 5WH . . . B 2 -20.982 5.811 -8.126 1 82.57 ? C32 5WH 1001 A 1 HETATM 33 C C33 5WH . . . B 2 -20.996 5.111 -5.718 1 91.37 ? C33 5WH 1001 A 1 HETATM 34 F F34 5WH . . . B 2 -20.964 3.844 -6.148 1 90.92 ? F34 5WH 1001 A 1 HETATM 35 F F35 5WH . . . B 2 -19.829 5.318 -5.112 1 93.61 ? F35 5WH 1001 A 1 HETATM 36 F F36 5WH . . . B 2 -21.935 5.088 -4.782 1 93.18 ? F36 5WH 1001 A 1 HETATM 37 C C37 5WH . . . B 2 -13.979 9.435 -17.803 1 47.61 ? C37 5WH 1001 A 1 HETATM 38 C C38 5WH . . . B 2 -15.178 9.051 -21.17 1 42.52 ? C38 5WH 1001 A 1 HETATM 39 O O39 5WH . . . B 2 -16.168 8.915 -21.851 1 42.24 ? O39 5WH 1001 A 1 HETATM 40 C C40 5WH . . . B 2 -13.924 9.601 -21.821 1 43.33 ? C40 5WH 1001 A 1 HETATM 41 C C41 5WH . . . B 2 -14.016 10.061 -23.258 1 43.17 ? C41 5WH 1001 A 1 HETATM 42 C C42 5WH . . . B 2 -13.393 8.753 -22.954 1 43.65 ? C42 5WH 1001 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 42 #