data_5FBO # _model_server_result.job_id z3gdwfVnuhdBnQDuuPHRaQ _model_server_result.datetime_utc '2024-11-22 06:48:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fbo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 5FBO # _exptl.entry_id 5FBO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 518.634 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[8-azanyl-3-[(2~{S})-1-[4-(dimethylamino)butanoyl]pyrrolidin-2-yl]imidazo[1,5-a]pyrazin-1-yl]-~{N}-(1,3-thiazol-2-yl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5FBO _cell.length_a 72.39 _cell.length_b 104.47 _cell.length_c 38.08 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FBO _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H30 N8 O2 S' _chem_comp.formula_weight 518.634 _chem_comp.id 5WE _chem_comp.mon_nstd_flag . _chem_comp.name 4-[8-azanyl-3-[(2~{S})-1-[4-(dimethylamino)butanoyl]pyrrolidin-2-yl]imidazo[1,5-a]pyrazin-1-yl]-~{N}-(1,3-thiazol-2-yl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O37 C30 5WE doub 1 n n C32 C31 5WE sing 2 n n C2 C3 5WE doub 3 n y C2 N1 5WE sing 4 n y C3 N6 5WE sing 5 n y C30 C31 5WE sing 6 n n C30 N14 5WE sing 7 n n C10 N14 5WE sing 8 n n C10 C11 5WE sing 9 n n C10 C7 5WE sing 10 n n N14 C13 5WE sing 11 n n N1 C4 5WE doub 12 n y N6 C7 5WE sing 13 n y N6 C5 5WE sing 14 n y C11 C12 5WE sing 15 n n C7 N8 5WE doub 16 n y C13 C12 5WE sing 17 n n C4 C5 5WE sing 18 n y C4 N15 5WE sing 19 n n C5 C9 5WE doub 20 n y N8 C9 5WE sing 21 n y C9 C16 5WE sing 22 n n C17 C16 5WE doub 23 n y C17 C18 5WE sing 24 n y C16 C21 5WE sing 25 n y C18 C19 5WE doub 26 n y C21 C20 5WE doub 27 n y C20 C19 5WE sing 28 n y C19 C22 5WE sing 29 n n C22 N23 5WE sing 30 n n C22 O24 5WE doub 31 n n N23 C25 5WE sing 32 n n C25 N29 5WE doub 33 n y C25 S26 5WE sing 34 n y N29 C28 5WE sing 35 n y S26 C27 5WE sing 36 n y C28 C27 5WE doub 37 n y C2 H1 5WE sing 38 n n C3 H2 5WE sing 39 n n C12 H3 5WE sing 40 n n C12 H4 5WE sing 41 n n C13 H5 5WE sing 42 n n C13 H6 5WE sing 43 n n N15 H7 5WE sing 44 n n N15 H8 5WE sing 45 n n C17 H9 5WE sing 46 n n C18 H10 5WE sing 47 n n C20 H11 5WE sing 48 n n C21 H12 5WE sing 49 n n C31 H13 5WE sing 50 n n C32 H14 5WE sing 51 n n C32 H15 5WE sing 52 n n C11 H16 5WE sing 53 n n C11 H17 5WE sing 54 n n C10 H18 5WE sing 55 n n N23 H19 5WE sing 56 n n C28 H20 5WE sing 57 n n C27 H21 5WE sing 58 n n C32 C1 5WE sing 59 n n C1 N2 5WE sing 60 n n N2 C8 5WE sing 61 n n N2 C14 5WE sing 62 n n C31 H22 5WE sing 63 n n C1 H23 5WE sing 64 n n C1 H24 5WE sing 65 n n C8 H25 5WE sing 66 n n C8 H26 5WE sing 67 n n C8 H27 5WE sing 68 n n C14 H28 5WE sing 69 n n C14 H29 5WE sing 70 n n C14 H30 5WE sing 71 n n # _atom_sites.entry_id 5FBO _atom_sites.fract_transf_matrix[1][1] 0.013814 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009572 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026261 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5WH A 1 1001 1001 5WH 5WH . C 3 5WE A 1 1002 1002 5WE 5WE . D 4 HOH A 1 1101 1101 HOH HOH . D 4 HOH A 2 1102 1102 HOH HOH . D 4 HOH A 3 1103 1103 HOH HOH . D 4 HOH A 4 1104 1104 HOH HOH . D 4 HOH A 5 1105 1105 HOH HOH . D 4 HOH A 6 1106 1106 HOH HOH . D 4 HOH A 7 1107 1107 HOH HOH . D 4 HOH A 8 1108 1108 HOH HOH . D 4 HOH A 9 1109 1109 HOH HOH . D 4 HOH A 10 1110 1110 HOH HOH . D 4 HOH A 11 1111 1111 HOH HOH . D 4 HOH A 12 1112 1112 HOH HOH . D 4 HOH A 13 1113 1113 HOH HOH . D 4 HOH A 14 1114 1114 HOH HOH . D 4 HOH A 15 1115 1115 HOH HOH . D 4 HOH A 16 1116 1116 HOH HOH . D 4 HOH A 17 1117 1117 HOH HOH . D 4 HOH A 18 1118 1118 HOH HOH . D 4 HOH A 19 1119 1119 HOH HOH . D 4 HOH A 20 1120 1120 HOH HOH . D 4 HOH A 21 1121 1121 HOH HOH . D 4 HOH A 22 1122 1122 HOH HOH . D 4 HOH A 23 1123 1123 HOH HOH . D 4 HOH A 24 1124 1124 HOH HOH . D 4 HOH A 25 1125 1125 HOH HOH . D 4 HOH A 26 1126 1126 HOH HOH . D 4 HOH A 27 1127 1127 HOH HOH . D 4 HOH A 28 1128 1128 HOH HOH . D 4 HOH A 29 1129 1129 HOH HOH . D 4 HOH A 30 1130 1130 HOH HOH . D 4 HOH A 31 1131 1131 HOH HOH . D 4 HOH A 32 1132 1132 HOH HOH . D 4 HOH A 33 1133 1133 HOH HOH . D 4 HOH A 34 1134 1134 HOH HOH . D 4 HOH A 35 1135 1135 HOH HOH . D 4 HOH A 36 1136 1136 HOH HOH . D 4 HOH A 37 1137 1137 HOH HOH . D 4 HOH A 38 1138 1138 HOH HOH . D 4 HOH A 39 1139 1139 HOH HOH . D 4 HOH A 40 1140 1140 HOH HOH . D 4 HOH A 41 1141 1141 HOH HOH . D 4 HOH A 42 1142 1142 HOH HOH . D 4 HOH A 43 1143 1143 HOH HOH . D 4 HOH A 44 1144 1144 HOH HOH . D 4 HOH A 45 1145 1145 HOH HOH . D 4 HOH A 46 1146 1146 HOH HOH . D 4 HOH A 47 1147 1147 HOH HOH . D 4 HOH A 48 1148 1148 HOH HOH . D 4 HOH A 49 1149 1149 HOH HOH . D 4 HOH A 50 1150 1150 HOH HOH . D 4 HOH A 51 1151 1151 HOH HOH . D 4 HOH A 52 1152 1152 HOH HOH . D 4 HOH A 53 1153 1153 HOH HOH . D 4 HOH A 54 1154 1154 HOH HOH . D 4 HOH A 55 1155 1155 HOH HOH . D 4 HOH A 56 1156 1156 HOH HOH . D 4 HOH A 57 1157 1157 HOH HOH . D 4 HOH A 58 1158 1158 HOH HOH . D 4 HOH A 59 1159 1159 HOH HOH . D 4 HOH A 60 1160 1160 HOH HOH . D 4 HOH A 61 1161 1161 HOH HOH . D 4 HOH A 62 1162 1162 HOH HOH . D 4 HOH A 63 1163 1163 HOH HOH . D 4 HOH A 64 1164 1164 HOH HOH . D 4 HOH A 65 1165 1165 HOH HOH . D 4 HOH A 66 1166 1166 HOH HOH . D 4 HOH A 67 1167 1167 HOH HOH . D 4 HOH A 68 1168 1168 HOH HOH . D 4 HOH A 69 1169 1169 HOH HOH . D 4 HOH A 70 1170 1170 HOH HOH . D 4 HOH A 71 1171 1171 HOH HOH . D 4 HOH A 72 1172 1172 HOH HOH . D 4 HOH A 73 1173 1173 HOH HOH . D 4 HOH A 74 1174 1174 HOH HOH . D 4 HOH A 75 1175 1175 HOH HOH . D 4 HOH A 76 1176 1176 HOH HOH . D 4 HOH A 77 1177 1177 HOH HOH . D 4 HOH A 78 1178 1178 HOH HOH . D 4 HOH A 79 1179 1179 HOH HOH . D 4 HOH A 80 1180 1180 HOH HOH . D 4 HOH A 81 1181 1181 HOH HOH . D 4 HOH A 82 1182 1182 HOH HOH . D 4 HOH A 83 1183 1183 HOH HOH . D 4 HOH A 84 1184 1184 HOH HOH . D 4 HOH A 85 1185 1185 HOH HOH . D 4 HOH A 86 1186 1186 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 5WE . . . C 3 -30.88 -5.527 -10.025 1 58.2 ? C2 5WE 1002 A 1 HETATM 2 C C3 5WE . . . C 3 -30.62 -5.62 -11.376 1 59.35 ? C3 5WE 1002 A 1 HETATM 3 C C4 5WE . . . C 3 -32.146 -3.519 -10.204 1 59.85 ? C4 5WE 1002 A 1 HETATM 4 C C5 5WE . . . C 3 -31.94 -3.496 -11.673 1 60.37 ? C5 5WE 1002 A 1 HETATM 5 C C12 5WE . . . C 3 -28.907 -4.253 -16.224 1 59.18 ? C12 5WE 1002 A 1 HETATM 6 C C13 5WE . . . C 3 -30.207 -4.711 -16.916 1 59.72 ? C13 5WE 1002 A 1 HETATM 7 N N14 5WE . . . C 3 -31.043 -5.349 -15.86 1 61.25 ? N14 5WE 1002 A 1 HETATM 8 N N15 5WE . . . C 3 -32.863 -2.553 -9.546 1 59.87 ? N15 5WE 1002 A 1 HETATM 9 C C16 5WE . . . C 3 -33.054 -1.464 -12.95 1 62.19 ? C16 5WE 1002 A 1 HETATM 10 C C17 5WE . . . C 3 -33.532 -0.772 -11.819 1 63.25 ? C17 5WE 1002 A 1 HETATM 11 C C18 5WE . . . C 3 -34.295 0.39 -11.964 1 61.99 ? C18 5WE 1002 A 1 HETATM 12 C C19 5WE . . . C 3 -34.596 0.887 -13.255 1 60.89 ? C19 5WE 1002 A 1 HETATM 13 C C20 5WE . . . C 3 -34.122 0.198 -14.401 1 61.16 ? C20 5WE 1002 A 1 HETATM 14 C C21 5WE . . . C 3 -33.358 -0.973 -14.251 1 62.09 ? C21 5WE 1002 A 1 HETATM 15 C C22 5WE . . . C 3 -35.417 2.136 -13.343 1 60.02 ? C22 5WE 1002 A 1 HETATM 16 O O37 5WE . . . C 3 -32.928 -6.425 -15.031 1 62.88 ? O37 5WE 1002 A 1 HETATM 17 C C30 5WE . . . C 3 -32.357 -5.928 -16.015 1 63.79 ? C30 5WE 1002 A 1 HETATM 18 C C31 5WE . . . C 3 -32.994 -5.91 -17.399 1 69.01 ? C31 5WE 1002 A 1 HETATM 19 C C32 5WE . . . C 3 -34.515 -6.162 -17.377 1 73.24 ? C32 5WE 1002 A 1 HETATM 20 C C11 5WE . . . C 3 -28.886 -4.898 -14.837 1 60.07 ? C11 5WE 1002 A 1 HETATM 21 C C10 5WE . . . C 3 -30.341 -5.323 -14.55 1 60.32 ? C10 5WE 1002 A 1 HETATM 22 C C7 5WE . . . C 3 -31.06 -4.416 -13.58 1 59.63 ? C7 5WE 1002 A 1 HETATM 23 N N6 5WE . . . C 3 -31.15 -4.605 -12.209 1 60.24 ? N6 5WE 1002 A 1 HETATM 24 N N8 5WE . . . C 3 -31.733 -3.284 -13.952 1 59.26 ? N8 5WE 1002 A 1 HETATM 25 C C9 5WE . . . C 3 -32.265 -2.697 -12.814 1 60.49 ? C9 5WE 1002 A 1 HETATM 26 N N1 5WE . . . C 3 -31.621 -4.515 -9.421 1 58.57 ? N1 5WE 1002 A 1 HETATM 27 O O24 5WE . . . C 3 -35.717 2.618 -14.433 1 58.41 ? O24 5WE 1002 A 1 HETATM 28 N N23 5WE . . . C 3 -35.837 2.737 -12.118 1 62.67 ? N23 5WE 1002 A 1 HETATM 29 C C25 5WE . . . C 3 -36.607 3.902 -11.979 1 66.38 ? C25 5WE 1002 A 1 HETATM 30 N N29 5WE . . . C 3 -36.931 4.357 -10.739 1 67.37 ? N29 5WE 1002 A 1 HETATM 31 S S26 5WE . . . C 3 -37.225 4.872 -13.294 1 68.04 ? S26 5WE 1002 A 1 HETATM 32 C C28 5WE . . . C 3 -37.703 5.531 -10.876 1 67.72 ? C28 5WE 1002 A 1 HETATM 33 C C27 5WE . . . C 3 -37.937 5.926 -12.165 1 68.39 ? C27 5WE 1002 A 1 HETATM 34 C C1 5WE . . . C 3 -35.256 -4.802 -17.333 1 76.74 ? C1 5WE 1002 A 1 HETATM 35 N N2 5WE . . . C 3 -35.295 -4.22 -18.728 1 78.12 ? N2 5WE 1002 A 1 HETATM 36 C C8 5WE . . . C 3 -34.732 -2.837 -18.757 1 78.52 ? C8 5WE 1002 A 1 HETATM 37 C C14 5WE . . . C 3 -36.685 -4.22 -19.272 1 78 ? C14 5WE 1002 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 37 #