data_5FDC # _model_server_result.job_id lfAQMku-mgkuGhOTot50aA _model_server_result.datetime_utc '2024-11-13 01:37:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fdc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5FDC # _exptl.entry_id 5FDC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.34 _cell.angle_gamma 90 _cell.entry_id 5FDC _cell.length_a 42.124 _cell.length_b 41.427 _cell.length_c 71.996 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FDC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc4 A O GLN 136 A GLN 137 1_555 E HG HGB . A HGB 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? metalc ? metalc5 A O GLU 204 A GLU 205 1_555 E HG HGB . A HGB 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.121 ? metalc ? metalc6 B ZN ZN . A ZN 301 1_555 C N1 5WN . A 5WN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc7 E HG HGB . A HGB 304 1_555 F O HOH . A HOH 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5FDC _atom_sites.fract_transf_matrix[1][1] 0.023739 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006069 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014336 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 262 ZN ZN . C 3 5WN A 1 302 263 5WN F48 . D 4 GOL A 1 303 264 GOL GOL . E 5 HGB A 1 304 265 HGB HGB . F 6 HOH A 1 401 438 HOH HOH . F 6 HOH A 2 402 480 HOH HOH . F 6 HOH A 3 403 559 HOH HOH . F 6 HOH A 4 404 384 HOH HOH . F 6 HOH A 5 405 424 HOH HOH . F 6 HOH A 6 406 525 HOH HOH . F 6 HOH A 7 407 550 HOH HOH . F 6 HOH A 8 408 560 HOH HOH . F 6 HOH A 9 409 523 HOH HOH . F 6 HOH A 10 410 511 HOH HOH . F 6 HOH A 11 411 521 HOH HOH . F 6 HOH A 12 412 492 HOH HOH . F 6 HOH A 13 413 336 HOH HOH . F 6 HOH A 14 414 542 HOH HOH . F 6 HOH A 15 415 328 HOH HOH . F 6 HOH A 16 416 319 HOH HOH . F 6 HOH A 17 417 555 HOH HOH . F 6 HOH A 18 418 519 HOH HOH . F 6 HOH A 19 419 474 HOH HOH . F 6 HOH A 20 420 394 HOH HOH . F 6 HOH A 21 421 335 HOH HOH . F 6 HOH A 22 422 481 HOH HOH . F 6 HOH A 23 423 518 HOH HOH . F 6 HOH A 24 424 339 HOH HOH . F 6 HOH A 25 425 489 HOH HOH . F 6 HOH A 26 426 398 HOH HOH . F 6 HOH A 27 427 446 HOH HOH . F 6 HOH A 28 428 325 HOH HOH . F 6 HOH A 29 429 461 HOH HOH . F 6 HOH A 30 430 354 HOH HOH . F 6 HOH A 31 431 301 HOH HOH . F 6 HOH A 32 432 337 HOH HOH . F 6 HOH A 33 433 448 HOH HOH . F 6 HOH A 34 434 512 HOH HOH . F 6 HOH A 35 435 450 HOH HOH . F 6 HOH A 36 436 503 HOH HOH . F 6 HOH A 37 437 315 HOH HOH . F 6 HOH A 38 438 449 HOH HOH . F 6 HOH A 39 439 531 HOH HOH . F 6 HOH A 40 440 367 HOH HOH . F 6 HOH A 41 441 556 HOH HOH . F 6 HOH A 42 442 314 HOH HOH . F 6 HOH A 43 443 399 HOH HOH . F 6 HOH A 44 444 427 HOH HOH . F 6 HOH A 45 445 320 HOH HOH . F 6 HOH A 46 446 410 HOH HOH . F 6 HOH A 47 447 431 HOH HOH . F 6 HOH A 48 448 471 HOH HOH . F 6 HOH A 49 449 396 HOH HOH . F 6 HOH A 50 450 304 HOH HOH . F 6 HOH A 51 451 529 HOH HOH . F 6 HOH A 52 452 357 HOH HOH . F 6 HOH A 53 453 343 HOH HOH . F 6 HOH A 54 454 426 HOH HOH . F 6 HOH A 55 455 469 HOH HOH . F 6 HOH A 56 456 332 HOH HOH . F 6 HOH A 57 457 470 HOH HOH . F 6 HOH A 58 458 541 HOH HOH . F 6 HOH A 59 459 312 HOH HOH . F 6 HOH A 60 460 344 HOH HOH . F 6 HOH A 61 461 400 HOH HOH . F 6 HOH A 62 462 408 HOH HOH . F 6 HOH A 63 463 347 HOH HOH . F 6 HOH A 64 464 372 HOH HOH . F 6 HOH A 65 465 532 HOH HOH . F 6 HOH A 66 466 338 HOH HOH . F 6 HOH A 67 467 342 HOH HOH . F 6 HOH A 68 468 462 HOH HOH . F 6 HOH A 69 469 389 HOH HOH . F 6 HOH A 70 470 401 HOH HOH . F 6 HOH A 71 471 362 HOH HOH . F 6 HOH A 72 472 413 HOH HOH . F 6 HOH A 73 473 558 HOH HOH . F 6 HOH A 74 474 428 HOH HOH . F 6 HOH A 75 475 371 HOH HOH . F 6 HOH A 76 476 352 HOH HOH . F 6 HOH A 77 477 359 HOH HOH . F 6 HOH A 78 478 403 HOH HOH . F 6 HOH A 79 479 323 HOH HOH . F 6 HOH A 80 480 391 HOH HOH . F 6 HOH A 81 481 355 HOH HOH . F 6 HOH A 82 482 313 HOH HOH . F 6 HOH A 83 483 309 HOH HOH . F 6 HOH A 84 484 494 HOH HOH . F 6 HOH A 85 485 330 HOH HOH . F 6 HOH A 86 486 326 HOH HOH . F 6 HOH A 87 487 544 HOH HOH . F 6 HOH A 88 488 341 HOH HOH . F 6 HOH A 89 489 435 HOH HOH . F 6 HOH A 90 490 414 HOH HOH . F 6 HOH A 91 491 397 HOH HOH . F 6 HOH A 92 492 306 HOH HOH . F 6 HOH A 93 493 563 HOH HOH . F 6 HOH A 94 494 333 HOH HOH . F 6 HOH A 95 495 561 HOH HOH . F 6 HOH A 96 496 411 HOH HOH . F 6 HOH A 97 497 350 HOH HOH . F 6 HOH A 98 498 546 HOH HOH . F 6 HOH A 99 499 321 HOH HOH . F 6 HOH A 100 500 418 HOH HOH . F 6 HOH A 101 501 349 HOH HOH . F 6 HOH A 102 502 393 HOH HOH . F 6 HOH A 103 503 345 HOH HOH . F 6 HOH A 104 504 452 HOH HOH . F 6 HOH A 105 505 351 HOH HOH . F 6 HOH A 106 506 500 HOH HOH . F 6 HOH A 107 507 329 HOH HOH . F 6 HOH A 108 508 303 HOH HOH . F 6 HOH A 109 509 419 HOH HOH . F 6 HOH A 110 510 370 HOH HOH . F 6 HOH A 111 511 465 HOH HOH . F 6 HOH A 112 512 322 HOH HOH . F 6 HOH A 113 513 545 HOH HOH . F 6 HOH A 114 514 340 HOH HOH . F 6 HOH A 115 515 422 HOH HOH . F 6 HOH A 116 516 334 HOH HOH . F 6 HOH A 117 517 429 HOH HOH . F 6 HOH A 118 518 433 HOH HOH . F 6 HOH A 119 519 311 HOH HOH . F 6 HOH A 120 520 318 HOH HOH . F 6 HOH A 121 521 387 HOH HOH . F 6 HOH A 122 522 308 HOH HOH . F 6 HOH A 123 523 415 HOH HOH . F 6 HOH A 124 524 467 HOH HOH . F 6 HOH A 125 525 514 HOH HOH . F 6 HOH A 126 526 421 HOH HOH . F 6 HOH A 127 527 430 HOH HOH . F 6 HOH A 128 528 305 HOH HOH . F 6 HOH A 129 529 358 HOH HOH . F 6 HOH A 130 530 440 HOH HOH . F 6 HOH A 131 531 513 HOH HOH . F 6 HOH A 132 532 388 HOH HOH . F 6 HOH A 133 533 564 HOH HOH . F 6 HOH A 134 534 356 HOH HOH . F 6 HOH A 135 535 402 HOH HOH . F 6 HOH A 136 536 499 HOH HOH . F 6 HOH A 137 537 457 HOH HOH . F 6 HOH A 138 538 476 HOH HOH . F 6 HOH A 139 539 425 HOH HOH . F 6 HOH A 140 540 395 HOH HOH . F 6 HOH A 141 541 310 HOH HOH . F 6 HOH A 142 542 455 HOH HOH . F 6 HOH A 143 543 437 HOH HOH . F 6 HOH A 144 544 327 HOH HOH . F 6 HOH A 145 545 562 HOH HOH . F 6 HOH A 146 546 534 HOH HOH . F 6 HOH A 147 547 317 HOH HOH . F 6 HOH A 148 548 538 HOH HOH . F 6 HOH A 149 549 464 HOH HOH . F 6 HOH A 150 550 379 HOH HOH . F 6 HOH A 151 551 331 HOH HOH . F 6 HOH A 152 552 472 HOH HOH . F 6 HOH A 153 553 364 HOH HOH . F 6 HOH A 154 554 346 HOH HOH . F 6 HOH A 155 555 416 HOH HOH . F 6 HOH A 156 556 377 HOH HOH . F 6 HOH A 157 557 373 HOH HOH . F 6 HOH A 158 558 491 HOH HOH . F 6 HOH A 159 559 466 HOH HOH . F 6 HOH A 160 560 407 HOH HOH . F 6 HOH A 161 561 324 HOH HOH . F 6 HOH A 162 562 386 HOH HOH . F 6 HOH A 163 563 353 HOH HOH . F 6 HOH A 164 564 475 HOH HOH . F 6 HOH A 165 565 348 HOH HOH . F 6 HOH A 166 566 406 HOH HOH . F 6 HOH A 167 567 365 HOH HOH . F 6 HOH A 168 568 526 HOH HOH . F 6 HOH A 169 569 369 HOH HOH . F 6 HOH A 170 570 423 HOH HOH . F 6 HOH A 171 571 517 HOH HOH . F 6 HOH A 172 572 380 HOH HOH . F 6 HOH A 173 573 368 HOH HOH . F 6 HOH A 174 574 483 HOH HOH . F 6 HOH A 175 575 451 HOH HOH . F 6 HOH A 176 576 432 HOH HOH . F 6 HOH A 177 577 536 HOH HOH . F 6 HOH A 178 578 456 HOH HOH . F 6 HOH A 179 579 505 HOH HOH . F 6 HOH A 180 580 434 HOH HOH . F 6 HOH A 181 581 374 HOH HOH . F 6 HOH A 182 582 302 HOH HOH . F 6 HOH A 183 583 392 HOH HOH . F 6 HOH A 184 584 459 HOH HOH . F 6 HOH A 185 585 363 HOH HOH . F 6 HOH A 186 586 383 HOH HOH . F 6 HOH A 187 587 479 HOH HOH . F 6 HOH A 188 588 385 HOH HOH . F 6 HOH A 189 589 366 HOH HOH . F 6 HOH A 190 590 482 HOH HOH . F 6 HOH A 191 591 378 HOH HOH . F 6 HOH A 192 592 409 HOH HOH . F 6 HOH A 193 593 382 HOH HOH . F 6 HOH A 194 594 376 HOH HOH . F 6 HOH A 195 595 539 HOH HOH . F 6 HOH A 196 596 316 HOH HOH . F 6 HOH A 197 597 468 HOH HOH . F 6 HOH A 198 598 495 HOH HOH . F 6 HOH A 199 599 484 HOH HOH . F 6 HOH A 200 600 510 HOH HOH . F 6 HOH A 201 601 533 HOH HOH . F 6 HOH A 202 602 478 HOH HOH . F 6 HOH A 203 603 375 HOH HOH . F 6 HOH A 204 604 528 HOH HOH . F 6 HOH A 205 605 307 HOH HOH . F 6 HOH A 206 606 547 HOH HOH . F 6 HOH A 207 607 420 HOH HOH . F 6 HOH A 208 608 404 HOH HOH . F 6 HOH A 209 609 360 HOH HOH . F 6 HOH A 210 610 551 HOH HOH . F 6 HOH A 211 611 552 HOH HOH . F 6 HOH A 212 612 390 HOH HOH . F 6 HOH A 213 613 412 HOH HOH . F 6 HOH A 214 614 506 HOH HOH . F 6 HOH A 215 615 485 HOH HOH . F 6 HOH A 216 616 508 HOH HOH . F 6 HOH A 217 617 487 HOH HOH . F 6 HOH A 218 618 557 HOH HOH . F 6 HOH A 219 619 463 HOH HOH . F 6 HOH A 220 620 498 HOH HOH . F 6 HOH A 221 621 381 HOH HOH . F 6 HOH A 222 622 486 HOH HOH . F 6 HOH A 223 623 524 HOH HOH . F 6 HOH A 224 624 490 HOH HOH . F 6 HOH A 225 625 496 HOH HOH . F 6 HOH A 226 626 522 HOH HOH . F 6 HOH A 227 627 507 HOH HOH . F 6 HOH A 228 628 548 HOH HOH . F 6 HOH A 229 629 543 HOH HOH . F 6 HOH A 230 630 509 HOH HOH . F 6 HOH A 231 631 530 HOH HOH . F 6 HOH A 232 632 453 HOH HOH . F 6 HOH A 233 633 439 HOH HOH . F 6 HOH A 234 634 501 HOH HOH . F 6 HOH A 235 635 502 HOH HOH . F 6 HOH A 236 636 549 HOH HOH . F 6 HOH A 237 637 443 HOH HOH . F 6 HOH A 238 638 405 HOH HOH . F 6 HOH A 239 639 515 HOH HOH . F 6 HOH A 240 640 417 HOH HOH . F 6 HOH A 241 641 497 HOH HOH . F 6 HOH A 242 642 553 HOH HOH . F 6 HOH A 243 643 520 HOH HOH . F 6 HOH A 244 644 527 HOH HOH . F 6 HOH A 245 645 460 HOH HOH . F 6 HOH A 246 646 454 HOH HOH . F 6 HOH A 247 647 444 HOH HOH . F 6 HOH A 248 648 537 HOH HOH . F 6 HOH A 249 649 441 HOH HOH . F 6 HOH A 250 650 540 HOH HOH . F 6 HOH A 251 651 473 HOH HOH . F 6 HOH A 252 652 535 HOH HOH . F 6 HOH A 253 653 493 HOH HOH . F 6 HOH A 254 654 477 HOH HOH . F 6 HOH A 255 655 554 HOH HOH . F 6 HOH A 256 656 361 HOH HOH . F 6 HOH A 257 657 504 HOH HOH . F 6 HOH A 258 658 447 HOH HOH . F 6 HOH A 259 659 458 HOH HOH . F 6 HOH A 260 660 436 HOH HOH . F 6 HOH A 261 661 516 HOH HOH . F 6 HOH A 262 662 445 HOH HOH . F 6 HOH A 263 663 488 HOH HOH . F 6 HOH A 264 664 442 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -6.591 _atom_site.Cartn_y -1.688 _atom_site.Cartn_z 15.225 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #