data_5FDR
#
_model_server_result.job_id            dYp9e-7DivhlmkfxkXhusQ 
_model_server_result.datetime_utc      '2025-01-08 15:48:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fdr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":400}' 
#
_entry.id    5FDR 
#
_exptl.entry_id    5FDR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              659.537 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-[[6-chloranyl-3-[3-(4-chloranyl-3,5-dimethyl-phenoxy)propyl]-7-(3,5-dimethyl-1~{H}-pyrazol-4-yl)-1~{H}-indol-2-yl]carbonylsulfamoyl]furan-2-carboxylic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.17 
_cell.angle_gamma         90 
_cell.entry_id            5FDR 
_cell.length_a            35.04 
_cell.length_b            115.005 
_cell.length_c            95.327 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FDR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E 1 1 
B,F 2 1 
C,G 3 1 
D,H 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C30 H28 Cl2 N4 O7 S' 
_chem_comp.formula_weight    659.537 
_chem_comp.id                5X3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-[[6-chloranyl-3-[3-(4-chloranyl-3,5-dimethyl-phenoxy)propyl]-7-(3,5-dimethyl-1~{H}-pyrazol-4-yl)-1~{H}-indol-2-yl]carbonylsulfamoyl]furan-2-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C38 C37 5X3 sing 1 n n 
O01 C02 5X3 doub 2 n n 
C37 C36 5X3 doub 3 n y 
C37 C39 5X3 sing 4 n y 
C36 C32 5X3 sing 5 n y 
C02 O44 5X3 sing 6 n n 
C02 C03 5X3 sing 7 n n 
C04 C03 5X3 doub 8 n y 
C04 C05 5X3 sing 9 n y 
C39 CL 5X3 sing 10 n n 
C39 C34 5X3 doub 11 n y 
C32 O31 5X3 sing 12 n n 
C32 C33 5X3 doub 13 n y 
O31 C30 5X3 sing 14 n n 
C03 O43 5X3 sing 15 n y 
C28 C29 5X3 sing 16 n n 
C28 C27 5X3 sing 17 n n 
C05 C06 5X3 doub 18 n y 
C34 C33 5X3 sing 19 n y 
C34 C35 5X3 sing 20 n n 
O43 C06 5X3 sing 21 n y 
C29 C30 5X3 sing 22 n n 
C15 C16 5X3 doub 23 n y 
C15 C14 5X3 sing 24 n y 
C27 C14 5X3 sing 25 n y 
C27 C11 5X3 doub 26 n y 
C06 S07 5X3 sing 27 n n 
C16 C17 5X3 sing 28 n y 
C14 C13 5X3 doub 29 n y 
O41 C10 5X3 doub 30 n n 
C11 C10 5X3 sing 31 n n 
C11 N12 5X3 sing 32 n y 
C10 N09 5X3 sing 33 n n 
C22 C21 5X3 sing 34 n n 
C17 C19 5X3 doub 35 n y 
C17 CL2 5X3 sing 36 n n 
C13 N12 5X3 sing 37 n y 
C13 C19 5X3 sing 38 n y 
N09 S07 5X3 sing 39 n n 
S07 O42 5X3 doub 40 n n 
S07 O08 5X3 doub 41 n n 
C19 C20 5X3 sing 42 n n 
C21 C20 5X3 doub 43 n y 
C21 N23 5X3 sing 44 n y 
C20 C25 5X3 sing 45 n y 
N23 N24 5X3 sing 46 n y 
C25 N24 5X3 doub 47 n y 
C25 C26 5X3 sing 48 n n 
N12 H1 5X3 sing 49 n n 
C15 H2 5X3 sing 50 n n 
C22 H3 5X3 sing 51 n n 
C22 H4 5X3 sing 52 n n 
C22 H5 5X3 sing 53 n n 
C26 H6 5X3 sing 54 n n 
C26 H7 5X3 sing 55 n n 
C26 H8 5X3 sing 56 n n 
C28 H9 5X3 sing 57 n n 
C28 H10 5X3 sing 58 n n 
C04 H11 5X3 sing 59 n n 
C05 H12 5X3 sing 60 n n 
N09 H13 5X3 sing 61 n n 
C16 H14 5X3 sing 62 n n 
N23 H15 5X3 sing 63 n n 
C29 H16 5X3 sing 64 n n 
C29 H17 5X3 sing 65 n n 
C30 H18 5X3 sing 66 n n 
C30 H19 5X3 sing 67 n n 
C33 H20 5X3 sing 68 n n 
C35 H21 5X3 sing 69 n n 
C35 H22 5X3 sing 70 n n 
C35 H23 5X3 sing 71 n n 
C36 H24 5X3 sing 72 n n 
C38 H25 5X3 sing 73 n n 
C38 H26 5X3 sing 74 n n 
C38 H27 5X3 sing 75 n n 
O44 H28 5X3 sing 76 n n 
#
_atom_sites.entry_id                     5FDR 
_atom_sites.fract_transf_matrix[1][1]    0.028539 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000581 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008695 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010492 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 5X3 A 1 400 400 5X3 LIG . 
F 2 5X3 B 1 400 400 5X3 LIG . 
G 2 5X3 C 1 400 400 5X3 LIG . 
H 2 5X3 D 1 400 400 5X3 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 5X3 . . . H 2 45.08 9.233 36.067 1 32.75 ? C10 5X3 400 D 1 
HETATM 2 N N12 5X3 . . . H 2 46.872 9.412 34.383 1 36.27 ? N12 5X3 400 D 1 
HETATM 3 C C13 5X3 . . . H 2 47.601 10.332 33.744 1 41.7 ? C13 5X3 400 D 1 
HETATM 4 C C15 5X3 . . . H 2 47.823 12.726 33.61 1 27.36 ? C15 5X3 400 D 1 
HETATM 5 C C17 5X3 . . . H 2 49.227 11.289 32.251 1 45.02 ? C17 5X3 400 D 1 
HETATM 6 C C20 5X3 . . . H 2 49.055 8.764 32.339 1 34.65 ? C20 5X3 400 D 1 
HETATM 7 C C21 5X3 . . . H 2 48.847 8.179 31.065 1 30.36 ? C21 5X3 400 D 1 
HETATM 8 C C22 5X3 . . . H 2 48.159 8.838 29.874 1 28.94 ? C22 5X3 400 D 1 
HETATM 9 C C26 5X3 . . . H 2 50.205 7.895 34.573 1 0.19 ? C26 5X3 400 D 1 
HETATM 10 C C28 5X3 . . . H 2 45.353 12.42 35.91 1 29.8 ? C28 5X3 400 D 1 
HETATM 11 O O01 5X3 . . . H 2 39.65 4.186 37.108 1 38.13 -1 O01 5X3 400 D 1 
HETATM 12 C C02 5X3 . . . H 2 39.982 4.545 35.942 1 45.56 ? C02 5X3 400 D 1 
HETATM 13 C C03 5X3 . . . H 2 41.327 5.262 35.724 1 34.54 ? C03 5X3 400 D 1 
HETATM 14 C C04 5X3 . . . H 2 41.842 5.685 34.493 1 20.07 ? C04 5X3 400 D 1 
HETATM 15 C C05 5X3 . . . H 2 43.109 6.294 34.792 1 13.6 ? C05 5X3 400 D 1 
HETATM 16 C C06 5X3 . . . H 2 43.23 6.167 36.182 1 25.4 ? C06 5X3 400 D 1 
HETATM 17 S S07 5X3 . . . H 2 44.645 6.724 37.158 1 31.33 ? S07 5X3 400 D 1 
HETATM 18 O O08 5X3 . . . H 2 44.212 7.302 38.635 1 14.28 ? O08 5X3 400 D 1 
HETATM 19 N N09 5X3 . . . H 2 45.497 7.86 36.242 1 15.87 ? N09 5X3 400 D 1 
HETATM 20 C C11 5X3 . . . H 2 46.026 10.02 35.191 1 32.33 ? C11 5X3 400 D 1 
HETATM 21 C C14 5X3 . . . H 2 47.204 11.593 34.164 1 33.34 ? C14 5X3 400 D 1 
HETATM 22 C C16 5X3 . . . H 2 48.837 12.564 32.664 1 37.35 ? C16 5X3 400 D 1 
HETATM 23 CL CL2 5X3 . . . H 2 50.504 11.062 31.042 1 63.48 ? CL2 5X3 400 D 1 
HETATM 24 C C19 5X3 . . . H 2 48.618 10.172 32.785 1 42.7 ? C19 5X3 400 D 1 
HETATM 25 N N23 5X3 . . . H 2 49.372 6.99 31.113 1 22.84 ? N23 5X3 400 D 1 
HETATM 26 N N24 5X3 . . . H 2 49.9 6.762 32.324 1 23.3 ? N24 5X3 400 D 1 
HETATM 27 C C25 5X3 . . . H 2 49.746 7.787 33.111 1 12.76 ? C25 5X3 400 D 1 
HETATM 28 C C27 5X3 . . . H 2 46.167 11.39 35.118 1 30.17 ? C27 5X3 400 D 1 
HETATM 29 C C29 5X3 . . . H 2 43.981 12.711 35.272 1 14.4 ? C29 5X3 400 D 1 
HETATM 30 C C30 5X3 . . . H 2 44.158 13.389 33.911 1 25.7 ? C30 5X3 400 D 1 
HETATM 31 O O31 5X3 . . . H 2 44.972 14.523 34.103 1 35.22 ? O31 5X3 400 D 1 
HETATM 32 C C32 5X3 . . . H 2 45.116 15.339 32.968 1 29.94 ? C32 5X3 400 D 1 
HETATM 33 C C33 5X3 . . . H 2 45.472 16.662 33.117 1 34.16 ? C33 5X3 400 D 1 
HETATM 34 C C34 5X3 . . . H 2 45.621 17.447 31.993 1 42.5 ? C34 5X3 400 D 1 
HETATM 35 C C35 5X3 . . . H 2 46.016 18.91 32.14 1 37.2 ? C35 5X3 400 D 1 
HETATM 36 C C36 5X3 . . . H 2 44.911 14.796 31.718 1 21.68 ? C36 5X3 400 D 1 
HETATM 37 C C37 5X3 . . . H 2 45.054 15.581 30.603 1 18.77 ? C37 5X3 400 D 1 
HETATM 38 C C38 5X3 . . . H 2 44.828 14.944 29.233 1 7.71 ? C38 5X3 400 D 1 
HETATM 39 C C39 5X3 . . . H 2 45.41 16.914 30.737 1 44.53 ? C39 5X3 400 D 1 
HETATM 40 CL CL 5X3 . . . H 2 45.603 17.978 29.32 1 60.04 ? CL 5X3 400 D 1 
HETATM 41 O O41 5X3 . . . H 2 44.097 9.7 36.553 1 22.18 ? O41 5X3 400 D 1 
HETATM 42 O O42 5X3 . . . H 2 45.658 5.438 37.389 1 20.6 ? O42 5X3 400 D 1 
HETATM 43 O O43 5X3 . . . H 2 42.182 5.57 36.669 1 36.81 ? O43 5X3 400 D 1 
HETATM 44 O O44 5X3 . . . H 2 39.201 4.311 34.969 1 52.49 ? O44 5X3 400 D 1 
#
_model_server_stats.io_time_ms              93 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           44 
#