data_5FE0
#
_model_server_result.job_id            A9j9BZeDP3Kqw12WxuVDHA 
_model_server_result.datetime_utc      '2024-11-16 17:57:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fe0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":901}' 
#
_entry.id    5FE0 
#
_exptl.entry_id    5FE0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              188.224 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N(6)-ACETYLLYSINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5FE0 
_cell.length_a            99.172 
_cell.length_b            99.172 
_cell.length_c            101.148 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FE0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C8 H16 N2 O3' 
_chem_comp.formula_weight    188.224 
_chem_comp.id                ALY 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              N(6)-ACETYLLYSINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH CH ALY doub 13 n n 
CH CH3 ALY sing 14 n n 
CH NZ ALY sing 15 n n 
CH3 HH31 ALY sing 16 n n 
CH3 HH32 ALY sing 17 n n 
CH3 HH33 ALY sing 18 n n 
NZ CE ALY sing 19 n n 
NZ HZ ALY sing 20 n n 
CE CD ALY sing 21 n n 
CE HE3 ALY sing 22 n n 
CE HE2 ALY sing 23 n n 
CD CG ALY sing 24 n n 
CD HD3 ALY sing 25 n n 
CD HD2 ALY sing 26 n n 
CG CB ALY sing 27 n n 
CG HG3 ALY sing 28 n n 
CG HG2 ALY sing 29 n n 
CB CA ALY sing 30 n n 
CB HB3 ALY sing 31 n n 
CB HB2 ALY sing 32 n n 
CA N ALY sing 33 n n 
CA C ALY sing 34 n n 
CA HA ALY sing 35 n n 
N H ALY sing 36 n n 
N H2 ALY sing 37 n n 
C O ALY doub 38 n n 
C OXT ALY sing 39 n n 
OXT HXT ALY sing 40 n n 
#
_atom_sites.entry_id                     5FE0 
_atom_sites.fract_transf_matrix[1][1]    0.010084 
_atom_sites.fract_transf_matrix[1][2]    0.005822 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011643 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009886 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ALY A 1 901 1 ALY ALY . 
D 2 ALY B 1 901 2 ALY ALY . 
E 3 HOH A 1 1001 136 HOH HOH . 
E 3 HOH A 2 1002 165 HOH HOH . 
E 3 HOH A 3 1003 35 HOH HOH . 
E 3 HOH A 4 1004 2 HOH HOH . 
E 3 HOH A 5 1005 72 HOH HOH . 
E 3 HOH A 6 1006 55 HOH HOH . 
E 3 HOH A 7 1007 74 HOH HOH . 
E 3 HOH A 8 1008 78 HOH HOH . 
E 3 HOH A 9 1009 24 HOH HOH . 
E 3 HOH A 10 1010 44 HOH HOH . 
E 3 HOH A 11 1011 170 HOH HOH . 
E 3 HOH A 12 1012 27 HOH HOH . 
E 3 HOH A 13 1013 71 HOH HOH . 
E 3 HOH A 14 1014 95 HOH HOH . 
E 3 HOH A 15 1015 125 HOH HOH . 
E 3 HOH A 16 1016 46 HOH HOH . 
E 3 HOH A 17 1017 169 HOH HOH . 
E 3 HOH A 18 1018 94 HOH HOH . 
E 3 HOH A 19 1019 3 HOH HOH . 
E 3 HOH A 20 1020 5 HOH HOH . 
E 3 HOH A 21 1021 45 HOH HOH . 
E 3 HOH A 22 1022 7 HOH HOH . 
E 3 HOH A 23 1023 158 HOH HOH . 
E 3 HOH A 24 1024 76 HOH HOH . 
E 3 HOH A 25 1025 107 HOH HOH . 
E 3 HOH A 26 1026 58 HOH HOH . 
E 3 HOH A 27 1027 4 HOH HOH . 
E 3 HOH A 28 1028 9 HOH HOH . 
E 3 HOH A 29 1029 51 HOH HOH . 
E 3 HOH A 30 1030 10 HOH HOH . 
E 3 HOH A 31 1031 40 HOH HOH . 
E 3 HOH A 32 1032 14 HOH HOH . 
E 3 HOH A 33 1033 22 HOH HOH . 
E 3 HOH A 34 1034 89 HOH HOH . 
E 3 HOH A 35 1035 96 HOH HOH . 
E 3 HOH A 36 1036 56 HOH HOH . 
E 3 HOH A 37 1037 34 HOH HOH . 
E 3 HOH A 38 1038 167 HOH HOH . 
E 3 HOH A 39 1039 39 HOH HOH . 
E 3 HOH A 40 1040 174 HOH HOH . 
E 3 HOH A 41 1041 163 HOH HOH . 
E 3 HOH A 42 1042 26 HOH HOH . 
E 3 HOH A 43 1043 177 HOH HOH . 
E 3 HOH A 44 1044 31 HOH HOH . 
E 3 HOH A 45 1045 63 HOH HOH . 
E 3 HOH A 46 1046 28 HOH HOH . 
E 3 HOH A 47 1047 29 HOH HOH . 
E 3 HOH A 48 1048 80 HOH HOH . 
E 3 HOH A 49 1049 8 HOH HOH . 
E 3 HOH A 50 1050 123 HOH HOH . 
E 3 HOH A 51 1051 137 HOH HOH . 
E 3 HOH A 52 1052 84 HOH HOH . 
E 3 HOH A 53 1053 129 HOH HOH . 
E 3 HOH A 54 1054 54 HOH HOH . 
E 3 HOH A 55 1055 42 HOH HOH . 
E 3 HOH A 56 1056 70 HOH HOH . 
E 3 HOH A 57 1057 103 HOH HOH . 
E 3 HOH A 58 1058 106 HOH HOH . 
E 3 HOH A 59 1059 126 HOH HOH . 
E 3 HOH A 60 1060 57 HOH HOH . 
E 3 HOH A 61 1061 81 HOH HOH . 
E 3 HOH A 62 1062 43 HOH HOH . 
E 3 HOH A 63 1063 171 HOH HOH . 
E 3 HOH A 64 1064 131 HOH HOH . 
E 3 HOH A 65 1065 93 HOH HOH . 
E 3 HOH A 66 1066 105 HOH HOH . 
E 3 HOH A 67 1067 122 HOH HOH . 
E 3 HOH A 68 1068 77 HOH HOH . 
E 3 HOH A 69 1069 117 HOH HOH . 
E 3 HOH A 70 1070 121 HOH HOH . 
E 3 HOH A 71 1071 132 HOH HOH . 
E 3 HOH A 72 1072 79 HOH HOH . 
E 3 HOH A 73 1073 108 HOH HOH . 
E 3 HOH A 74 1074 173 HOH HOH . 
E 3 HOH A 75 1075 168 HOH HOH . 
E 3 HOH A 76 1076 175 HOH HOH . 
E 3 HOH A 77 1077 172 HOH HOH . 
E 3 HOH A 78 1078 120 HOH HOH . 
E 3 HOH A 79 1079 138 HOH HOH . 
E 3 HOH A 80 1080 73 HOH HOH . 
E 3 HOH A 81 1081 111 HOH HOH . 
E 3 HOH A 82 1082 110 HOH HOH . 
E 3 HOH A 83 1083 112 HOH HOH . 
E 3 HOH A 84 1084 82 HOH HOH . 
E 3 HOH A 85 1085 164 HOH HOH . 
F 3 HOH B 1 1001 116 HOH HOH . 
F 3 HOH B 2 1002 90 HOH HOH . 
F 3 HOH B 3 1003 37 HOH HOH . 
F 3 HOH B 4 1004 100 HOH HOH . 
F 3 HOH B 5 1005 12 HOH HOH . 
F 3 HOH B 6 1006 23 HOH HOH . 
F 3 HOH B 7 1007 179 HOH HOH . 
F 3 HOH B 8 1008 133 HOH HOH . 
F 3 HOH B 9 1009 48 HOH HOH . 
F 3 HOH B 10 1010 128 HOH HOH . 
F 3 HOH B 11 1011 15 HOH HOH . 
F 3 HOH B 12 1012 30 HOH HOH . 
F 3 HOH B 13 1013 146 HOH HOH . 
F 3 HOH B 14 1014 161 HOH HOH . 
F 3 HOH B 15 1015 25 HOH HOH . 
F 3 HOH B 16 1016 145 HOH HOH . 
F 3 HOH B 17 1017 92 HOH HOH . 
F 3 HOH B 18 1018 184 HOH HOH . 
F 3 HOH B 19 1019 53 HOH HOH . 
F 3 HOH B 20 1020 83 HOH HOH . 
F 3 HOH B 21 1021 162 HOH HOH . 
F 3 HOH B 22 1022 20 HOH HOH . 
F 3 HOH B 23 1023 32 HOH HOH . 
F 3 HOH B 24 1024 101 HOH HOH . 
F 3 HOH B 25 1025 49 HOH HOH . 
F 3 HOH B 26 1026 21 HOH HOH . 
F 3 HOH B 27 1027 16 HOH HOH . 
F 3 HOH B 28 1028 1 HOH HOH . 
F 3 HOH B 29 1029 61 HOH HOH . 
F 3 HOH B 30 1030 38 HOH HOH . 
F 3 HOH B 31 1031 60 HOH HOH . 
F 3 HOH B 32 1032 41 HOH HOH . 
F 3 HOH B 33 1033 185 HOH HOH . 
F 3 HOH B 34 1034 140 HOH HOH . 
F 3 HOH B 35 1035 36 HOH HOH . 
F 3 HOH B 36 1036 50 HOH HOH . 
F 3 HOH B 37 1037 115 HOH HOH . 
F 3 HOH B 38 1038 182 HOH HOH . 
F 3 HOH B 39 1039 180 HOH HOH . 
F 3 HOH B 40 1040 141 HOH HOH . 
F 3 HOH B 41 1041 91 HOH HOH . 
F 3 HOH B 42 1042 13 HOH HOH . 
F 3 HOH B 43 1043 69 HOH HOH . 
F 3 HOH B 44 1044 181 HOH HOH . 
F 3 HOH B 45 1045 18 HOH HOH . 
F 3 HOH B 46 1046 160 HOH HOH . 
F 3 HOH B 47 1047 166 HOH HOH . 
F 3 HOH B 48 1048 178 HOH HOH . 
F 3 HOH B 49 1049 183 HOH HOH . 
F 3 HOH B 50 1050 142 HOH HOH . 
F 3 HOH B 51 1051 186 HOH HOH . 
F 3 HOH B 52 1052 148 HOH HOH . 
F 3 HOH B 53 1053 130 HOH HOH . 
F 3 HOH B 54 1054 118 HOH HOH . 
F 3 HOH B 55 1055 86 HOH HOH . 
F 3 HOH B 56 1056 98 HOH HOH . 
F 3 HOH B 57 1057 176 HOH HOH . 
F 3 HOH B 58 1058 97 HOH HOH . 
F 3 HOH B 59 1059 109 HOH HOH . 
F 3 HOH B 60 1060 113 HOH HOH . 
F 3 HOH B 61 1061 114 HOH HOH . 
F 3 HOH B 62 1062 87 HOH HOH . 
F 3 HOH B 63 1063 157 HOH HOH . 
F 3 HOH B 64 1064 99 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH ALY . . . D 2 -13.249 17.988 24.178 1 68.34 ? OH ALY 901 B 1 
HETATM 2 C CH ALY . . . D 2 -12.631 17.962 23.127 1 71.72 ? CH ALY 901 B 1 
HETATM 3 C CH3 ALY . . . D 2 -13.357 17.829 21.822 1 74.01 ? CH3 ALY 901 B 1 
HETATM 4 N NZ ALY . . . D 2 -11.292 18.045 23.041 1 72.61 ? NZ ALY 901 B 1 
HETATM 5 C CE ALY . . . D 2 -10.393 18.166 24.188 1 71.36 ? CE ALY 901 B 1 
HETATM 6 C CD ALY . . . D 2 -9.582 19.461 24.177 1 73.29 ? CD ALY 901 B 1 
HETATM 7 C CG ALY . . . D 2 -8.45 19.434 23.141 1 74.99 ? CG ALY 901 B 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#