data_5FE3
#
_model_server_result.job_id            AqrTGbEw-2LAzjKWXyR9Xg 
_model_server_result.datetime_utc      '2024-11-23 23:02:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fe3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":902}' 
#
_entry.id    5FE3 
#
_exptl.entry_id    5FE3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5FE3 
_cell.length_a            99.721 
_cell.length_b            99.721 
_cell.length_c            100.742 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FE3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1 
B,G,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 104 n n 
C1 C2 EDO sing 105 n n 
C1 H11 EDO sing 106 n n 
C1 H12 EDO sing 107 n n 
O1 HO1 EDO sing 108 n n 
C2 O2 EDO sing 109 n n 
C2 H21 EDO sing 110 n n 
C2 H22 EDO sing 111 n n 
O2 HO2 EDO sing 112 n n 
#
_atom_sites.entry_id                     5FE3 
_atom_sites.fract_transf_matrix[1][1]    0.010028 
_atom_sites.fract_transf_matrix[1][2]    0.00579 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011579 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009926 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 901 1 EDO EDO . 
D 2 EDO A 1 902 3 EDO EDO . 
E 2 EDO A 1 903 4 EDO EDO . 
F 3 5WX A 1 904 2 5WX DRG . 
G 2 EDO B 1 901 2 EDO EDO . 
H 2 EDO B 1 902 5 EDO EDO . 
I 2 EDO B 1 903 6 EDO EDO . 
J 3 5WX B 1 904 1 5WX DRG . 
K 4 HOH A 1 1001 42 HOH HOH . 
K 4 HOH A 2 1002 131 HOH HOH . 
K 4 HOH A 3 1003 184 HOH HOH . 
K 4 HOH A 4 1004 242 HOH HOH . 
K 4 HOH A 5 1005 203 HOH HOH . 
K 4 HOH A 6 1006 46 HOH HOH . 
K 4 HOH A 7 1007 52 HOH HOH . 
K 4 HOH A 8 1008 160 HOH HOH . 
K 4 HOH A 9 1009 228 HOH HOH . 
K 4 HOH A 10 1010 73 HOH HOH . 
K 4 HOH A 11 1011 240 HOH HOH . 
K 4 HOH A 12 1012 186 HOH HOH . 
K 4 HOH A 13 1013 14 HOH HOH . 
K 4 HOH A 14 1014 281 HOH HOH . 
K 4 HOH A 15 1015 222 HOH HOH . 
K 4 HOH A 16 1016 48 HOH HOH . 
K 4 HOH A 17 1017 188 HOH HOH . 
K 4 HOH A 18 1018 189 HOH HOH . 
K 4 HOH A 19 1019 227 HOH HOH . 
K 4 HOH A 20 1020 27 HOH HOH . 
K 4 HOH A 21 1021 29 HOH HOH . 
K 4 HOH A 22 1022 84 HOH HOH . 
K 4 HOH A 23 1023 127 HOH HOH . 
K 4 HOH A 24 1024 183 HOH HOH . 
K 4 HOH A 25 1025 81 HOH HOH . 
K 4 HOH A 26 1026 293 HOH HOH . 
K 4 HOH A 27 1027 88 HOH HOH . 
K 4 HOH A 28 1028 21 HOH HOH . 
K 4 HOH A 29 1029 224 HOH HOH . 
K 4 HOH A 30 1030 97 HOH HOH . 
K 4 HOH A 31 1031 247 HOH HOH . 
K 4 HOH A 32 1032 229 HOH HOH . 
K 4 HOH A 33 1033 26 HOH HOH . 
K 4 HOH A 34 1034 4 HOH HOH . 
K 4 HOH A 35 1035 25 HOH HOH . 
K 4 HOH A 36 1036 9 HOH HOH . 
K 4 HOH A 37 1037 20 HOH HOH . 
K 4 HOH A 38 1038 142 HOH HOH . 
K 4 HOH A 39 1039 58 HOH HOH . 
K 4 HOH A 40 1040 201 HOH HOH . 
K 4 HOH A 41 1041 248 HOH HOH . 
K 4 HOH A 42 1042 75 HOH HOH . 
K 4 HOH A 43 1043 129 HOH HOH . 
K 4 HOH A 44 1044 94 HOH HOH . 
K 4 HOH A 45 1045 33 HOH HOH . 
K 4 HOH A 46 1046 153 HOH HOH . 
K 4 HOH A 47 1047 28 HOH HOH . 
K 4 HOH A 48 1048 163 HOH HOH . 
K 4 HOH A 49 1049 6 HOH HOH . 
K 4 HOH A 50 1050 44 HOH HOH . 
K 4 HOH A 51 1051 252 HOH HOH . 
K 4 HOH A 52 1052 259 HOH HOH . 
K 4 HOH A 53 1053 47 HOH HOH . 
K 4 HOH A 54 1054 185 HOH HOH . 
K 4 HOH A 55 1055 24 HOH HOH . 
K 4 HOH A 56 1056 68 HOH HOH . 
K 4 HOH A 57 1057 60 HOH HOH . 
K 4 HOH A 58 1058 22 HOH HOH . 
K 4 HOH A 59 1059 225 HOH HOH . 
K 4 HOH A 60 1060 37 HOH HOH . 
K 4 HOH A 61 1061 50 HOH HOH . 
K 4 HOH A 62 1062 243 HOH HOH . 
K 4 HOH A 63 1063 7 HOH HOH . 
K 4 HOH A 64 1064 34 HOH HOH . 
K 4 HOH A 65 1065 35 HOH HOH . 
K 4 HOH A 66 1066 61 HOH HOH . 
K 4 HOH A 67 1067 295 HOH HOH . 
K 4 HOH A 68 1068 16 HOH HOH . 
K 4 HOH A 69 1069 19 HOH HOH . 
K 4 HOH A 70 1070 15 HOH HOH . 
K 4 HOH A 71 1071 74 HOH HOH . 
K 4 HOH A 72 1072 55 HOH HOH . 
K 4 HOH A 73 1073 187 HOH HOH . 
K 4 HOH A 74 1074 199 HOH HOH . 
K 4 HOH A 75 1075 232 HOH HOH . 
K 4 HOH A 76 1076 95 HOH HOH . 
K 4 HOH A 77 1077 278 HOH HOH . 
K 4 HOH A 78 1078 155 HOH HOH . 
K 4 HOH A 79 1079 230 HOH HOH . 
K 4 HOH A 80 1080 38 HOH HOH . 
K 4 HOH A 81 1081 128 HOH HOH . 
K 4 HOH A 82 1082 76 HOH HOH . 
K 4 HOH A 83 1083 13 HOH HOH . 
K 4 HOH A 84 1084 154 HOH HOH . 
K 4 HOH A 85 1085 198 HOH HOH . 
K 4 HOH A 86 1086 66 HOH HOH . 
K 4 HOH A 87 1087 194 HOH HOH . 
K 4 HOH A 88 1088 284 HOH HOH . 
K 4 HOH A 89 1089 204 HOH HOH . 
K 4 HOH A 90 1090 279 HOH HOH . 
K 4 HOH A 91 1091 161 HOH HOH . 
K 4 HOH A 92 1092 191 HOH HOH . 
K 4 HOH A 93 1093 31 HOH HOH . 
K 4 HOH A 94 1094 168 HOH HOH . 
K 4 HOH A 95 1095 246 HOH HOH . 
K 4 HOH A 96 1096 101 HOH HOH . 
K 4 HOH A 97 1097 53 HOH HOH . 
K 4 HOH A 98 1098 223 HOH HOH . 
K 4 HOH A 99 1099 241 HOH HOH . 
K 4 HOH A 100 1100 276 HOH HOH . 
K 4 HOH A 101 1101 164 HOH HOH . 
K 4 HOH A 102 1102 110 HOH HOH . 
K 4 HOH A 103 1103 78 HOH HOH . 
K 4 HOH A 104 1104 150 HOH HOH . 
K 4 HOH A 105 1105 190 HOH HOH . 
K 4 HOH A 106 1106 207 HOH HOH . 
K 4 HOH A 107 1107 292 HOH HOH . 
K 4 HOH A 108 1108 231 HOH HOH . 
K 4 HOH A 109 1109 192 HOH HOH . 
K 4 HOH A 110 1110 69 HOH HOH . 
K 4 HOH A 111 1111 195 HOH HOH . 
K 4 HOH A 112 1112 239 HOH HOH . 
K 4 HOH A 113 1113 258 HOH HOH . 
K 4 HOH A 114 1114 245 HOH HOH . 
K 4 HOH A 115 1115 57 HOH HOH . 
K 4 HOH A 116 1116 260 HOH HOH . 
K 4 HOH A 117 1117 237 HOH HOH . 
K 4 HOH A 118 1118 257 HOH HOH . 
K 4 HOH A 119 1119 106 HOH HOH . 
K 4 HOH A 120 1120 266 HOH HOH . 
K 4 HOH A 121 1121 130 HOH HOH . 
K 4 HOH A 122 1122 156 HOH HOH . 
K 4 HOH A 123 1123 162 HOH HOH . 
K 4 HOH A 124 1124 83 HOH HOH . 
K 4 HOH A 125 1125 234 HOH HOH . 
K 4 HOH A 126 1126 289 HOH HOH . 
K 4 HOH A 127 1127 288 HOH HOH . 
K 4 HOH A 128 1128 202 HOH HOH . 
K 4 HOH A 129 1129 233 HOH HOH . 
K 4 HOH A 130 1130 294 HOH HOH . 
K 4 HOH A 131 1131 165 HOH HOH . 
L 4 HOH B 1 1001 138 HOH HOH . 
L 4 HOH B 2 1002 179 HOH HOH . 
L 4 HOH B 3 1003 12 HOH HOH . 
L 4 HOH B 4 1004 70 HOH HOH . 
L 4 HOH B 5 1005 214 HOH HOH . 
L 4 HOH B 6 1006 111 HOH HOH . 
L 4 HOH B 7 1007 5 HOH HOH . 
L 4 HOH B 8 1008 166 HOH HOH . 
L 4 HOH B 9 1009 238 HOH HOH . 
L 4 HOH B 10 1010 10 HOH HOH . 
L 4 HOH B 11 1011 114 HOH HOH . 
L 4 HOH B 12 1012 141 HOH HOH . 
L 4 HOH B 13 1013 18 HOH HOH . 
L 4 HOH B 14 1014 181 HOH HOH . 
L 4 HOH B 15 1015 158 HOH HOH . 
L 4 HOH B 16 1016 67 HOH HOH . 
L 4 HOH B 17 1017 171 HOH HOH . 
L 4 HOH B 18 1018 262 HOH HOH . 
L 4 HOH B 19 1019 112 HOH HOH . 
L 4 HOH B 20 1020 290 HOH HOH . 
L 4 HOH B 21 1021 217 HOH HOH . 
L 4 HOH B 22 1022 286 HOH HOH . 
L 4 HOH B 23 1023 43 HOH HOH . 
L 4 HOH B 24 1024 117 HOH HOH . 
L 4 HOH B 25 1025 65 HOH HOH . 
L 4 HOH B 26 1026 79 HOH HOH . 
L 4 HOH B 27 1027 62 HOH HOH . 
L 4 HOH B 28 1028 174 HOH HOH . 
L 4 HOH B 29 1029 270 HOH HOH . 
L 4 HOH B 30 1030 216 HOH HOH . 
L 4 HOH B 31 1031 39 HOH HOH . 
L 4 HOH B 32 1032 144 HOH HOH . 
L 4 HOH B 33 1033 193 HOH HOH . 
L 4 HOH B 34 1034 236 HOH HOH . 
L 4 HOH B 35 1035 2 HOH HOH . 
L 4 HOH B 36 1036 157 HOH HOH . 
L 4 HOH B 37 1037 118 HOH HOH . 
L 4 HOH B 38 1038 215 HOH HOH . 
L 4 HOH B 39 1039 148 HOH HOH . 
L 4 HOH B 40 1040 23 HOH HOH . 
L 4 HOH B 41 1041 175 HOH HOH . 
L 4 HOH B 42 1042 251 HOH HOH . 
L 4 HOH B 43 1043 180 HOH HOH . 
L 4 HOH B 44 1044 120 HOH HOH . 
L 4 HOH B 45 1045 54 HOH HOH . 
L 4 HOH B 46 1046 136 HOH HOH . 
L 4 HOH B 47 1047 40 HOH HOH . 
L 4 HOH B 48 1048 182 HOH HOH . 
L 4 HOH B 49 1049 8 HOH HOH . 
L 4 HOH B 50 1050 1 HOH HOH . 
L 4 HOH B 51 1051 137 HOH HOH . 
L 4 HOH B 52 1052 200 HOH HOH . 
L 4 HOH B 53 1053 297 HOH HOH . 
L 4 HOH B 54 1054 287 HOH HOH . 
L 4 HOH B 55 1055 3 HOH HOH . 
L 4 HOH B 56 1056 121 HOH HOH . 
L 4 HOH B 57 1057 32 HOH HOH . 
L 4 HOH B 58 1058 149 HOH HOH . 
L 4 HOH B 59 1059 98 HOH HOH . 
L 4 HOH B 60 1060 11 HOH HOH . 
L 4 HOH B 61 1061 277 HOH HOH . 
L 4 HOH B 62 1062 219 HOH HOH . 
L 4 HOH B 63 1063 235 HOH HOH . 
L 4 HOH B 64 1064 104 HOH HOH . 
L 4 HOH B 65 1065 159 HOH HOH . 
L 4 HOH B 66 1066 41 HOH HOH . 
L 4 HOH B 67 1067 122 HOH HOH . 
L 4 HOH B 68 1068 206 HOH HOH . 
L 4 HOH B 69 1069 253 HOH HOH . 
L 4 HOH B 70 1070 64 HOH HOH . 
L 4 HOH B 71 1071 45 HOH HOH . 
L 4 HOH B 72 1072 296 HOH HOH . 
L 4 HOH B 73 1073 268 HOH HOH . 
L 4 HOH B 74 1074 71 HOH HOH . 
L 4 HOH B 75 1075 113 HOH HOH . 
L 4 HOH B 76 1076 63 HOH HOH . 
L 4 HOH B 77 1077 249 HOH HOH . 
L 4 HOH B 78 1078 124 HOH HOH . 
L 4 HOH B 79 1079 283 HOH HOH . 
L 4 HOH B 80 1080 119 HOH HOH . 
L 4 HOH B 81 1081 105 HOH HOH . 
L 4 HOH B 82 1082 135 HOH HOH . 
L 4 HOH B 83 1083 205 HOH HOH . 
L 4 HOH B 84 1084 221 HOH HOH . 
L 4 HOH B 85 1085 133 HOH HOH . 
L 4 HOH B 86 1086 167 HOH HOH . 
L 4 HOH B 87 1087 123 HOH HOH . 
L 4 HOH B 88 1088 134 HOH HOH . 
L 4 HOH B 89 1089 267 HOH HOH . 
L 4 HOH B 90 1090 173 HOH HOH . 
L 4 HOH B 91 1091 30 HOH HOH . 
L 4 HOH B 92 1092 49 HOH HOH . 
L 4 HOH B 93 1093 263 HOH HOH . 
L 4 HOH B 94 1094 211 HOH HOH . 
L 4 HOH B 95 1095 86 HOH HOH . 
L 4 HOH B 96 1096 273 HOH HOH . 
L 4 HOH B 97 1097 172 HOH HOH . 
L 4 HOH B 98 1098 250 HOH HOH . 
L 4 HOH B 99 1099 99 HOH HOH . 
L 4 HOH B 100 1100 265 HOH HOH . 
L 4 HOH B 101 1101 209 HOH HOH . 
L 4 HOH B 102 1102 146 HOH HOH . 
L 4 HOH B 103 1103 125 HOH HOH . 
L 4 HOH B 104 1104 275 HOH HOH . 
L 4 HOH B 105 1105 151 HOH HOH . 
L 4 HOH B 106 1106 85 HOH HOH . 
L 4 HOH B 107 1107 280 HOH HOH . 
L 4 HOH B 108 1108 170 HOH HOH . 
L 4 HOH B 109 1109 132 HOH HOH . 
L 4 HOH B 110 1110 255 HOH HOH . 
L 4 HOH B 111 1111 256 HOH HOH . 
L 4 HOH B 112 1112 282 HOH HOH . 
L 4 HOH B 113 1113 176 HOH HOH . 
L 4 HOH B 114 1114 140 HOH HOH . 
L 4 HOH B 115 1115 115 HOH HOH . 
L 4 HOH B 116 1116 116 HOH HOH . 
L 4 HOH B 117 1117 244 HOH HOH . 
L 4 HOH B 118 1118 145 HOH HOH . 
L 4 HOH B 119 1119 178 HOH HOH . 
L 4 HOH B 120 1120 147 HOH HOH . 
L 4 HOH B 121 1121 169 HOH HOH . 
L 4 HOH B 122 1122 261 HOH HOH . 
L 4 HOH B 123 1123 254 HOH HOH . 
L 4 HOH B 124 1124 93 HOH HOH . 
L 4 HOH B 125 1125 291 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 2 2.727 18.14 -9.052 1 46.47 ? C1 EDO 902 A 1 
HETATM 2 O O1 EDO . . . D 2 1.515 17.415 -9.266 1 51.41 ? O1 EDO 902 A 1 
HETATM 3 C C2 EDO . . . D 2 2.772 18.753 -7.661 1 46.9 ? C2 EDO 902 A 1 
HETATM 4 O O2 EDO . . . D 2 4.018 19.416 -7.496 1 43.48 ? O2 EDO 902 A 1 
#
_model_server_stats.io_time_ms              40 
_model_server_stats.parse_time_ms           97 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           1154 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           4 
#