data_5FER # _model_server_result.job_id tN4w5WF4zjq4NRUsWa_2aw _model_server_result.datetime_utc '2024-10-28 02:38:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fer # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":102}' # _entry.id 5FER # _exptl.entry_id 5FER _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5FER _cell.length_a 60.48 _cell.length_b 71.7 _cell.length_c 160.43 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FER _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 16 A CYS 13 1_555 G ZN ZN . A ZN 101 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.48 ? metalc ? metalc2 A SG CYS 19 A CYS 16 1_555 G ZN ZN . A ZN 101 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.333 ? metalc ? metalc3 A SG CYS 31 A CYS 28 1_555 H ZN ZN . A ZN 102 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.271 ? metalc ? metalc4 A ND1 HIS 33 A HIS 30 1_555 H ZN ZN . A ZN 102 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.073 ? metalc ? metalc5 A SG CYS 36 A CYS 33 1_555 G ZN ZN . A ZN 101 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.348 ? metalc ? metalc6 A SG CYS 39 A CYS 36 1_555 G ZN ZN . A ZN 101 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.35 ? metalc ? metalc7 A SG CYS 53 A CYS 50 1_555 H ZN ZN . A ZN 102 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.353 ? metalc ? metalc8 A SG CYS 56 A CYS 53 1_555 H ZN ZN . A ZN 102 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.325 ? metalc ? metalc9 D SG CYS 16 D CYS 13 1_555 J ZN ZN . D ZN 102 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.412 ? metalc ? metalc10 D SG CYS 19 D CYS 16 1_555 J ZN ZN . D ZN 102 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.327 ? metalc ? metalc11 D SG CYS 31 D CYS 28 1_555 I ZN ZN . D ZN 101 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.277 ? metalc ? metalc12 D ND1 HIS 33 D HIS 30 1_555 I ZN ZN . D ZN 101 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.063 ? metalc ? metalc13 D SG CYS 36 D CYS 33 1_555 J ZN ZN . D ZN 102 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.306 ? metalc ? metalc14 D SG CYS 39 D CYS 36 1_555 J ZN ZN . D ZN 102 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.342 ? metalc ? metalc15 D SG CYS 53 D CYS 50 1_555 I ZN ZN . D ZN 101 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.376 ? metalc ? metalc16 D SG CYS 56 D CYS 53 1_555 I ZN ZN . D ZN 101 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.273 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5FER _atom_sites.fract_transf_matrix[1][1] 0.016534 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ZN A 1 101 1 ZN ZN . H 4 ZN A 1 102 2 ZN ZN . I 4 ZN D 1 101 3 ZN ZN . J 4 ZN D 1 102 4 ZN ZN . K 5 HOH A 1 201 3 HOH HOH . K 5 HOH A 2 202 9 HOH HOH . K 5 HOH A 3 203 1 HOH HOH . K 5 HOH A 4 204 19 HOH HOH . K 5 HOH A 5 205 10 HOH HOH . K 5 HOH A 6 206 24 HOH HOH . K 5 HOH A 7 207 41 HOH HOH . K 5 HOH A 8 208 23 HOH HOH . K 5 HOH A 9 209 38 HOH HOH . K 5 HOH A 10 210 68 HOH HOH . K 5 HOH A 11 211 52 HOH HOH . L 5 HOH B 1 201 27 HOH HOH . L 5 HOH B 2 202 7 HOH HOH . L 5 HOH B 3 203 37 HOH HOH . L 5 HOH B 4 204 57 HOH HOH . L 5 HOH B 5 205 46 HOH HOH . L 5 HOH B 6 206 56 HOH HOH . L 5 HOH B 7 207 55 HOH HOH . L 5 HOH B 8 208 8 HOH HOH . L 5 HOH B 9 209 6 HOH HOH . L 5 HOH B 10 210 12 HOH HOH . L 5 HOH B 11 211 15 HOH HOH . L 5 HOH B 12 212 54 HOH HOH . M 5 HOH C 1 101 61 HOH HOH . M 5 HOH C 2 102 62 HOH HOH . M 5 HOH C 3 103 26 HOH HOH . M 5 HOH C 4 104 2 HOH HOH . M 5 HOH C 5 105 4 HOH HOH . M 5 HOH C 6 106 42 HOH HOH . M 5 HOH C 7 107 31 HOH HOH . M 5 HOH C 8 108 18 HOH HOH . N 5 HOH D 1 201 65 HOH HOH . N 5 HOH D 2 202 51 HOH HOH . N 5 HOH D 3 203 14 HOH HOH . N 5 HOH D 4 204 53 HOH HOH . N 5 HOH D 5 205 13 HOH HOH . N 5 HOH D 6 206 16 HOH HOH . N 5 HOH D 7 207 28 HOH HOH . N 5 HOH D 8 208 48 HOH HOH . N 5 HOH D 9 209 29 HOH HOH . N 5 HOH D 10 210 43 HOH HOH . N 5 HOH D 11 211 64 HOH HOH . N 5 HOH D 12 212 58 HOH HOH . N 5 HOH D 13 213 45 HOH HOH . N 5 HOH D 14 214 63 HOH HOH . O 5 HOH E 1 201 66 HOH HOH . O 5 HOH E 2 202 59 HOH HOH . O 5 HOH E 3 203 17 HOH HOH . O 5 HOH E 4 204 30 HOH HOH . O 5 HOH E 5 205 35 HOH HOH . O 5 HOH E 6 206 5 HOH HOH . O 5 HOH E 7 207 47 HOH HOH . O 5 HOH E 8 208 20 HOH HOH . O 5 HOH E 9 209 36 HOH HOH . O 5 HOH E 10 210 25 HOH HOH . O 5 HOH E 11 211 34 HOH HOH . O 5 HOH E 12 212 33 HOH HOH . O 5 HOH E 13 213 60 HOH HOH . O 5 HOH E 14 214 39 HOH HOH . P 5 HOH F 1 101 22 HOH HOH . P 5 HOH F 2 102 50 HOH HOH . P 5 HOH F 3 103 67 HOH HOH . P 5 HOH F 4 104 32 HOH HOH . P 5 HOH F 5 105 49 HOH HOH . P 5 HOH F 6 106 21 HOH HOH . P 5 HOH F 7 107 40 HOH HOH . P 5 HOH F 8 108 11 HOH HOH . P 5 HOH F 9 109 44 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id L _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 55.997 _atom_site.Cartn_y 59.592 _atom_site.Cartn_z 91.131 _atom_site.occupancy 0.67 _atom_site.B_iso_or_equiv 38.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #