data_5FGK
#
_model_server_result.job_id            -BREDilF0du4u-6ciQYOtw 
_model_server_result.datetime_utc      '2024-12-17 11:49:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fgk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    5FGK 
#
_exptl.entry_id    5FGK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              396.873 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            8-[3-(3-azanyl-2~{H}-indazol-6-yl)-5-chloranyl-pyridin-4-yl]-2,8-diazaspiro[4.5]decan-1-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5FGK 
_cell.length_a            71.943 
_cell.length_b            71.928 
_cell.length_c            177.926 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FGK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H21 Cl N6 O' 
_chem_comp.formula_weight    396.873 
_chem_comp.id                5XG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              8-[3-(3-azanyl-2~{H}-indazol-6-yl)-5-chloranyl-pyridin-4-yl]-2,8-diazaspiro[4.5]decan-1-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 5XG sing 1 n n 
C2 N3 5XG sing 2 n y 
C2 C10 5XG doub 3 n y 
N3 N4 5XG sing 4 n y 
C10 C9 5XG sing 5 n y 
C10 C5 5XG sing 6 n y 
C9 C8 5XG doub 7 n y 
N4 C5 5XG doub 8 n y 
C5 C6 5XG sing 9 n y 
C8 C7 5XG sing 10 n y 
C6 C7 5XG doub 11 n y 
C7 C11 5XG sing 12 n n 
C12 C11 5XG doub 13 n y 
C12 N13 5XG sing 14 n y 
C11 C17 5XG sing 15 n y 
N13 C14 5XG doub 16 n y 
C19 N18 5XG sing 17 n n 
C19 C20 5XG sing 18 n n 
C17 N18 5XG sing 19 n n 
C17 C15 5XG doub 20 n y 
N18 C28 5XG sing 21 n n 
C22 C21 5XG sing 22 n n 
C22 C23 5XG sing 23 n n 
C20 C21 5XG sing 24 n n 
C14 C15 5XG sing 25 n y 
C15 CL1 5XG sing 26 n n 
C28 C27 5XG sing 27 n n 
C21 C27 5XG sing 28 n n 
C21 C25 5XG sing 29 n n 
C23 N24 5XG sing 30 n n 
C25 N24 5XG sing 31 n n 
C25 O26 5XG doub 32 n n 
C6 H1 5XG sing 33 n n 
C8 H2 5XG sing 34 n n 
C12 H3 5XG sing 35 n n 
C19 H4 5XG sing 36 n n 
C19 H5 5XG sing 37 n n 
C23 H6 5XG sing 38 n n 
C23 H7 5XG sing 39 n n 
C27 H8 5XG sing 40 n n 
C27 H9 5XG sing 41 n n 
N1 H10 5XG sing 42 n n 
N1 H11 5XG sing 43 n n 
N3 H12 5XG sing 44 n n 
C9 H13 5XG sing 45 n n 
C14 H14 5XG sing 46 n n 
C20 H15 5XG sing 47 n n 
C20 H16 5XG sing 48 n n 
C22 H17 5XG sing 49 n n 
C22 H18 5XG sing 50 n n 
N24 H19 5XG sing 51 n n 
C28 H20 5XG sing 52 n n 
C28 H21 5XG sing 53 n n 
#
_atom_sites.entry_id                     5FGK 
_atom_sites.fract_transf_matrix[1][1]    0.0139 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013903 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00562 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 5XG A 1 401 1 5XG INX . 
D 4 DMS A 1 402 1 DMS DMS . 
E 5 EDO A 1 403 2 EDO EDO . 
F 6 FMT A 1 404 3 FMT FMT . 
G 6 FMT A 1 405 4 FMT FMT . 
H 6 FMT A 1 406 8 FMT FMT . 
I 6 FMT A 1 407 9 FMT FMT . 
J 6 FMT A 1 408 10 FMT FMT . 
K 6 FMT A 1 409 11 FMT FMT . 
L 5 EDO A 1 410 12 EDO EDO . 
M 6 FMT B 1 301 5 FMT FMT . 
N 7 HOH A 1 501 97 HOH HOH . 
N 7 HOH A 2 502 163 HOH HOH . 
N 7 HOH A 3 503 27 HOH HOH . 
N 7 HOH A 4 504 42 HOH HOH . 
N 7 HOH A 5 505 68 HOH HOH . 
N 7 HOH A 6 506 108 HOH HOH . 
N 7 HOH A 7 507 62 HOH HOH . 
N 7 HOH A 8 508 162 HOH HOH . 
N 7 HOH A 9 509 183 HOH HOH . 
N 7 HOH A 10 510 92 HOH HOH . 
N 7 HOH A 11 511 80 HOH HOH . 
N 7 HOH A 12 512 179 HOH HOH . 
N 7 HOH A 13 513 107 HOH HOH . 
N 7 HOH A 14 514 129 HOH HOH . 
N 7 HOH A 15 515 46 HOH HOH . 
N 7 HOH A 16 516 113 HOH HOH . 
N 7 HOH A 17 517 39 HOH HOH . 
N 7 HOH A 18 518 51 HOH HOH . 
N 7 HOH A 19 519 34 HOH HOH . 
N 7 HOH A 20 520 95 HOH HOH . 
N 7 HOH A 21 521 47 HOH HOH . 
N 7 HOH A 22 522 69 HOH HOH . 
N 7 HOH A 23 523 41 HOH HOH . 
N 7 HOH A 24 524 155 HOH HOH . 
N 7 HOH A 25 525 196 HOH HOH . 
N 7 HOH A 26 526 184 HOH HOH . 
N 7 HOH A 27 527 74 HOH HOH . 
N 7 HOH A 28 528 67 HOH HOH . 
N 7 HOH A 29 529 45 HOH HOH . 
N 7 HOH A 30 530 3 HOH HOH . 
N 7 HOH A 31 531 52 HOH HOH . 
N 7 HOH A 32 532 93 HOH HOH . 
N 7 HOH A 33 533 24 HOH HOH . 
N 7 HOH A 34 534 86 HOH HOH . 
N 7 HOH A 35 535 55 HOH HOH . 
N 7 HOH A 36 536 2 HOH HOH . 
N 7 HOH A 37 537 70 HOH HOH . 
N 7 HOH A 38 538 49 HOH HOH . 
N 7 HOH A 39 539 28 HOH HOH . 
N 7 HOH A 40 540 195 HOH HOH . 
N 7 HOH A 41 541 85 HOH HOH . 
N 7 HOH A 42 542 158 HOH HOH . 
N 7 HOH A 43 543 159 HOH HOH . 
N 7 HOH A 44 544 119 HOH HOH . 
N 7 HOH A 45 545 40 HOH HOH . 
N 7 HOH A 46 546 94 HOH HOH . 
N 7 HOH A 47 547 84 HOH HOH . 
N 7 HOH A 48 548 63 HOH HOH . 
N 7 HOH A 49 549 198 HOH HOH . 
N 7 HOH A 50 550 66 HOH HOH . 
N 7 HOH A 51 551 48 HOH HOH . 
N 7 HOH A 52 552 182 HOH HOH . 
N 7 HOH A 53 553 56 HOH HOH . 
N 7 HOH A 54 554 181 HOH HOH . 
N 7 HOH A 55 555 197 HOH HOH . 
N 7 HOH A 56 556 156 HOH HOH . 
N 7 HOH A 57 557 133 HOH HOH . 
N 7 HOH A 58 558 38 HOH HOH . 
N 7 HOH A 59 559 114 HOH HOH . 
N 7 HOH A 60 560 76 HOH HOH . 
N 7 HOH A 61 561 73 HOH HOH . 
N 7 HOH A 62 562 77 HOH HOH . 
N 7 HOH A 63 563 44 HOH HOH . 
N 7 HOH A 64 564 200 HOH HOH . 
N 7 HOH A 65 565 109 HOH HOH . 
N 7 HOH A 66 566 87 HOH HOH . 
N 7 HOH A 67 567 201 HOH HOH . 
N 7 HOH A 68 568 118 HOH HOH . 
N 7 HOH A 69 569 100 HOH HOH . 
N 7 HOH A 70 570 153 HOH HOH . 
N 7 HOH A 71 571 4 HOH HOH . 
N 7 HOH A 72 572 152 HOH HOH . 
N 7 HOH A 73 573 154 HOH HOH . 
N 7 HOH A 74 574 5 HOH HOH . 
N 7 HOH A 75 575 37 HOH HOH . 
N 7 HOH A 76 576 36 HOH HOH . 
N 7 HOH A 77 577 110 HOH HOH . 
N 7 HOH A 78 578 65 HOH HOH . 
N 7 HOH A 79 579 6 HOH HOH . 
N 7 HOH A 80 580 8 HOH HOH . 
N 7 HOH A 81 581 121 HOH HOH . 
N 7 HOH A 82 582 83 HOH HOH . 
N 7 HOH A 83 583 143 HOH HOH . 
N 7 HOH A 84 584 90 HOH HOH . 
N 7 HOH A 85 585 189 HOH HOH . 
N 7 HOH A 86 586 120 HOH HOH . 
N 7 HOH A 87 587 78 HOH HOH . 
N 7 HOH A 88 588 11 HOH HOH . 
N 7 HOH A 89 589 72 HOH HOH . 
N 7 HOH A 90 590 111 HOH HOH . 
N 7 HOH A 91 591 75 HOH HOH . 
N 7 HOH A 92 592 53 HOH HOH . 
N 7 HOH A 93 593 60 HOH HOH . 
N 7 HOH A 94 594 81 HOH HOH . 
N 7 HOH A 95 595 103 HOH HOH . 
N 7 HOH A 96 596 104 HOH HOH . 
N 7 HOH A 97 597 20 HOH HOH . 
N 7 HOH A 98 598 150 HOH HOH . 
N 7 HOH A 99 599 9 HOH HOH . 
N 7 HOH A 100 600 161 HOH HOH . 
N 7 HOH A 101 601 194 HOH HOH . 
N 7 HOH A 102 602 112 HOH HOH . 
N 7 HOH A 103 603 21 HOH HOH . 
N 7 HOH A 104 604 160 HOH HOH . 
N 7 HOH A 105 605 26 HOH HOH . 
N 7 HOH A 106 606 178 HOH HOH . 
N 7 HOH A 107 607 29 HOH HOH . 
N 7 HOH A 108 608 106 HOH HOH . 
N 7 HOH A 109 609 105 HOH HOH . 
N 7 HOH A 110 610 147 HOH HOH . 
N 7 HOH A 111 611 25 HOH HOH . 
N 7 HOH A 112 612 148 HOH HOH . 
N 7 HOH A 113 613 157 HOH HOH . 
O 7 HOH B 1 401 127 HOH HOH . 
O 7 HOH B 2 402 82 HOH HOH . 
O 7 HOH B 3 403 96 HOH HOH . 
O 7 HOH B 4 404 134 HOH HOH . 
O 7 HOH B 5 405 71 HOH HOH . 
O 7 HOH B 6 406 23 HOH HOH . 
O 7 HOH B 7 407 43 HOH HOH . 
O 7 HOH B 8 408 137 HOH HOH . 
O 7 HOH B 9 409 140 HOH HOH . 
O 7 HOH B 10 410 1 HOH HOH . 
O 7 HOH B 11 411 89 HOH HOH . 
O 7 HOH B 12 412 64 HOH HOH . 
O 7 HOH B 13 413 141 HOH HOH . 
O 7 HOH B 14 414 186 HOH HOH . 
O 7 HOH B 15 415 19 HOH HOH . 
O 7 HOH B 16 416 128 HOH HOH . 
O 7 HOH B 17 417 145 HOH HOH . 
O 7 HOH B 18 418 192 HOH HOH . 
O 7 HOH B 19 419 101 HOH HOH . 
O 7 HOH B 20 420 185 HOH HOH . 
O 7 HOH B 21 421 188 HOH HOH . 
O 7 HOH B 22 422 169 HOH HOH . 
O 7 HOH B 23 423 16 HOH HOH . 
O 7 HOH B 24 424 166 HOH HOH . 
O 7 HOH B 25 425 59 HOH HOH . 
O 7 HOH B 26 426 22 HOH HOH . 
O 7 HOH B 27 427 54 HOH HOH . 
O 7 HOH B 28 428 187 HOH HOH . 
O 7 HOH B 29 429 174 HOH HOH . 
O 7 HOH B 30 430 50 HOH HOH . 
O 7 HOH B 31 431 58 HOH HOH . 
O 7 HOH B 32 432 116 HOH HOH . 
O 7 HOH B 33 433 117 HOH HOH . 
O 7 HOH B 34 434 123 HOH HOH . 
O 7 HOH B 35 435 124 HOH HOH . 
O 7 HOH B 36 436 164 HOH HOH . 
O 7 HOH B 37 437 126 HOH HOH . 
O 7 HOH B 38 438 33 HOH HOH . 
O 7 HOH B 39 439 7 HOH HOH . 
O 7 HOH B 40 440 99 HOH HOH . 
O 7 HOH B 41 441 79 HOH HOH . 
O 7 HOH B 42 442 136 HOH HOH . 
O 7 HOH B 43 443 122 HOH HOH . 
O 7 HOH B 44 444 98 HOH HOH . 
O 7 HOH B 45 445 175 HOH HOH . 
O 7 HOH B 46 446 132 HOH HOH . 
O 7 HOH B 47 447 14 HOH HOH . 
O 7 HOH B 48 448 102 HOH HOH . 
O 7 HOH B 49 449 135 HOH HOH . 
O 7 HOH B 50 450 125 HOH HOH . 
O 7 HOH B 51 451 168 HOH HOH . 
O 7 HOH B 52 452 88 HOH HOH . 
O 7 HOH B 53 453 31 HOH HOH . 
O 7 HOH B 54 454 35 HOH HOH . 
O 7 HOH B 55 455 10 HOH HOH . 
O 7 HOH B 56 456 138 HOH HOH . 
O 7 HOH B 57 457 18 HOH HOH . 
O 7 HOH B 58 458 173 HOH HOH . 
O 7 HOH B 59 459 170 HOH HOH . 
O 7 HOH B 60 460 176 HOH HOH . 
O 7 HOH B 61 461 32 HOH HOH . 
O 7 HOH B 62 462 193 HOH HOH . 
O 7 HOH B 63 463 13 HOH HOH . 
O 7 HOH B 64 464 17 HOH HOH . 
O 7 HOH B 65 465 12 HOH HOH . 
O 7 HOH B 66 466 167 HOH HOH . 
O 7 HOH B 67 467 191 HOH HOH . 
O 7 HOH B 68 468 139 HOH HOH . 
O 7 HOH B 69 469 199 HOH HOH . 
O 7 HOH B 70 470 165 HOH HOH . 
O 7 HOH B 71 471 30 HOH HOH . 
O 7 HOH B 72 472 171 HOH HOH . 
O 7 HOH B 73 473 177 HOH HOH . 
O 7 HOH B 74 474 172 HOH HOH . 
O 7 HOH B 75 475 146 HOH HOH . 
O 7 HOH B 76 476 15 HOH HOH . 
O 7 HOH B 77 477 149 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 5XG . . . C 3 -4.001 -21.319 140.401 1 65.14 ? C2 5XG 401 A 1 
HETATM 2 C C5 5XG . . . C 3 -5.315 -21.373 142.284 1 60.18 ? C5 5XG 401 A 1 
HETATM 3 C C6 5XG . . . C 3 -6.027 -22.024 143.325 1 52.99 ? C6 5XG 401 A 1 
HETATM 4 C C7 5XG . . . C 3 -6.056 -23.411 143.387 1 56.64 ? C7 5XG 401 A 1 
HETATM 5 C C8 5XG . . . C 3 -5.356 -24.197 142.446 1 58.78 ? C8 5XG 401 A 1 
HETATM 6 C C11 5XG . . . C 3 -6.771 -24.105 144.495 1 55.08 ? C11 5XG 401 A 1 
HETATM 7 C C12 5XG . . . C 3 -7.961 -24.785 144.238 1 54.21 ? C12 5XG 401 A 1 
HETATM 8 N N13 5XG . . . C 3 -8.61 -25.418 145.204 1 48.5 ? N13 5XG 401 A 1 
HETATM 9 C C15 5XG . . . C 3 -6.99 -24.791 146.803 1 53.67 ? C15 5XG 401 A 1 
HETATM 10 C C17 5XG . . . C 3 -6.251 -24.11 145.827 1 48.27 ? C17 5XG 401 A 1 
HETATM 11 C C19 5XG . . . C 3 -3.796 -23.804 145.493 1 49.79 ? C19 5XG 401 A 1 
HETATM 12 C C21 5XG . . . C 3 -2.58 -22.437 147.219 1 54.73 ? C21 5XG 401 A 1 
HETATM 13 C C23 5XG . . . C 3 -1.375 -20.371 147.256 1 57.31 ? C23 5XG 401 A 1 
HETATM 14 O O26 5XG . . . C 3 -1.174 -23.464 148.883 1 58.92 ? O26 5XG 401 A 1 
HETATM 15 C C27 5XG . . . C 3 -3.876 -22.247 147.997 1 50.13 ? C27 5XG 401 A 1 
HETATM 16 N N1 5XG . . . C 3 -3.225 -21.656 139.299 1 59.41 ? N1 5XG 401 A 1 
HETATM 17 N N3 5XG . . . C 3 -4.303 -20.071 140.802 1 63.07 ? N3 5XG 401 A 1 
HETATM 18 N N4 5XG . . . C 3 -5.106 -20.11 141.94 1 54 ? N4 5XG 401 A 1 
HETATM 19 C C9 5XG . . . C 3 -4.662 -23.624 141.421 1 59.65 ? C9 5XG 401 A 1 
HETATM 20 C C10 5XG . . . C 3 -4.605 -22.21 141.292 1 63.25 ? C10 5XG 401 A 1 
HETATM 21 C C14 5XG . . . C 3 -8.157 -25.43 146.445 1 54.47 ? C14 5XG 401 A 1 
HETATM 22 CL CL1 5XG . . . C 3 -6.498 -24.871 148.465 1 54.46 ? CL1 5XG 401 A 1 
HETATM 23 N N18 5XG . . . C 3 -5.065 -23.434 146.151 1 50.04 ? N18 5XG 401 A 1 
HETATM 24 C C20 5XG . . . C 3 -2.609 -23.751 146.442 1 53.52 ? C20 5XG 401 A 1 
HETATM 25 C C22 5XG . . . C 3 -2.26 -21.226 146.313 1 55.29 ? C22 5XG 401 A 1 
HETATM 26 N N24 5XG . . . C 3 -0.781 -21.321 148.203 1 58.1 ? N24 5XG 401 A 1 
HETATM 27 C C25 5XG . . . C 3 -1.443 -22.496 148.198 1 54.91 ? C25 5XG 401 A 1 
HETATM 28 C C28 5XG . . . C 3 -5.103 -22.284 147.078 1 50.23 ? C28 5XG 401 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           73 
_model_server_stats.create_model_time_ms    88 
_model_server_stats.query_time_ms           472 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           28 
#