data_5FGL
#
_model_server_result.job_id            tcWZLf3WxmMZRMCvb8Jhvw 
_model_server_result.datetime_utc      '2025-03-06 08:36:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fgl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":301}' 
#
_entry.id    5FGL 
#
_exptl.entry_id    5FGL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              195.172 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-oxidanylidene-4-(6-oxidanylidene-1~{H}-pyridin-3-yl)butanoic acid' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5FGL 
_cell.length_a            149.522 
_cell.length_b            149.522 
_cell.length_c            156.019 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FGL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,M,N 1 1 
C,D,I,J,O,P 2 1 
E,F,K,L,Q,R 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
_chem_comp.formula           'C9 H9 N O4' 
_chem_comp.formula_weight    195.172 
_chem_comp.id                6HY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-oxidanylidene-4-(6-oxidanylidene-1~{H}-pyridin-3-yl)butanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C4 6HY sing 1 n n 
N C7 6HY sing 2 n n 
O1 C7 6HY doub 3 n n 
C4 C2 6HY doub 4 n n 
C7 C6 6HY sing 5 n n 
O C1 6HY doub 6 n n 
C2 C1 6HY sing 7 n n 
C2 C5 6HY sing 8 n n 
C6 C5 6HY doub 9 n n 
C1 C 6HY sing 10 n n 
C C3 6HY sing 11 n n 
C3 C8 6HY sing 12 n n 
C8 O2 6HY doub 13 n n 
C8 O3 6HY sing 14 n n 
O3 H1 6HY sing 15 n n 
C3 H2 6HY sing 16 n n 
C3 H3 6HY sing 17 n n 
C H4 6HY sing 18 n n 
C H5 6HY sing 19 n n 
C5 H6 6HY sing 20 n n 
C6 H7 6HY sing 21 n n 
C4 H9 6HY sing 22 n n 
N H8 6HY sing 23 n n 
#
_atom_sites.entry_id                     5FGL 
_atom_sites.fract_transf_matrix[1][1]    0.006688 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006688 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006409 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 6HY A 1 301 3 6HY 6HY . 
H 2 6HY B 1 301 2 6HY 6HY . 
I 2 6HY C 1 301 4 6HY 6HY . 
J 2 6HY D 1 301 5 6HY 6HY . 
K 2 6HY E 1 301 6 6HY 6HY . 
L 2 6HY E 1 302 7 6HY 6HY . 
M 3 HOH A 1 401 177 HOH HOH . 
M 3 HOH A 2 402 80 HOH HOH . 
M 3 HOH A 3 403 14 HOH HOH . 
M 3 HOH A 4 404 153 HOH HOH . 
M 3 HOH A 5 405 124 HOH HOH . 
M 3 HOH A 6 406 104 HOH HOH . 
M 3 HOH A 7 407 12 HOH HOH . 
M 3 HOH A 8 408 169 HOH HOH . 
M 3 HOH A 9 409 50 HOH HOH . 
M 3 HOH A 10 410 136 HOH HOH . 
M 3 HOH A 11 411 28 HOH HOH . 
M 3 HOH A 12 412 23 HOH HOH . 
M 3 HOH A 13 413 142 HOH HOH . 
M 3 HOH A 14 414 54 HOH HOH . 
M 3 HOH A 15 415 37 HOH HOH . 
M 3 HOH A 16 416 121 HOH HOH . 
M 3 HOH A 17 417 7 HOH HOH . 
M 3 HOH A 18 418 77 HOH HOH . 
M 3 HOH A 19 419 19 HOH HOH . 
M 3 HOH A 20 420 65 HOH HOH . 
M 3 HOH A 21 421 85 HOH HOH . 
M 3 HOH A 22 422 186 HOH HOH . 
M 3 HOH A 23 423 100 HOH HOH . 
N 3 HOH B 1 401 92 HOH HOH . 
N 3 HOH B 2 402 134 HOH HOH . 
N 3 HOH B 3 403 72 HOH HOH . 
N 3 HOH B 4 404 188 HOH HOH . 
N 3 HOH B 5 405 68 HOH HOH . 
N 3 HOH B 6 406 171 HOH HOH . 
N 3 HOH B 7 407 132 HOH HOH . 
N 3 HOH B 8 408 11 HOH HOH . 
N 3 HOH B 9 409 120 HOH HOH . 
N 3 HOH B 10 410 137 HOH HOH . 
N 3 HOH B 11 411 69 HOH HOH . 
N 3 HOH B 12 412 76 HOH HOH . 
N 3 HOH B 13 413 178 HOH HOH . 
N 3 HOH B 14 414 102 HOH HOH . 
N 3 HOH B 15 415 32 HOH HOH . 
N 3 HOH B 16 416 122 HOH HOH . 
N 3 HOH B 17 417 112 HOH HOH . 
N 3 HOH B 18 418 144 HOH HOH . 
N 3 HOH B 19 419 113 HOH HOH . 
N 3 HOH B 20 420 36 HOH HOH . 
N 3 HOH B 21 421 26 HOH HOH . 
N 3 HOH B 22 422 182 HOH HOH . 
N 3 HOH B 23 423 48 HOH HOH . 
N 3 HOH B 24 424 181 HOH HOH . 
N 3 HOH B 25 425 88 HOH HOH . 
N 3 HOH B 26 426 9 HOH HOH . 
N 3 HOH B 27 427 179 HOH HOH . 
N 3 HOH B 28 428 45 HOH HOH . 
N 3 HOH B 29 429 10 HOH HOH . 
N 3 HOH B 30 430 180 HOH HOH . 
N 3 HOH B 31 431 139 HOH HOH . 
N 3 HOH B 32 432 64 HOH HOH . 
N 3 HOH B 33 433 150 HOH HOH . 
N 3 HOH B 34 434 172 HOH HOH . 
N 3 HOH B 35 435 170 HOH HOH . 
N 3 HOH B 36 436 156 HOH HOH . 
O 3 HOH C 1 401 91 HOH HOH . 
O 3 HOH C 2 402 90 HOH HOH . 
O 3 HOH C 3 403 127 HOH HOH . 
O 3 HOH C 4 404 117 HOH HOH . 
O 3 HOH C 5 405 176 HOH HOH . 
O 3 HOH C 6 406 133 HOH HOH . 
O 3 HOH C 7 407 84 HOH HOH . 
O 3 HOH C 8 408 89 HOH HOH . 
O 3 HOH C 9 409 5 HOH HOH . 
O 3 HOH C 10 410 41 HOH HOH . 
O 3 HOH C 11 411 3 HOH HOH . 
O 3 HOH C 12 412 63 HOH HOH . 
O 3 HOH C 13 413 105 HOH HOH . 
O 3 HOH C 14 414 164 HOH HOH . 
O 3 HOH C 15 415 1 HOH HOH . 
O 3 HOH C 16 416 13 HOH HOH . 
O 3 HOH C 17 417 33 HOH HOH . 
O 3 HOH C 18 418 185 HOH HOH . 
O 3 HOH C 19 419 101 HOH HOH . 
O 3 HOH C 20 420 29 HOH HOH . 
O 3 HOH C 21 421 175 HOH HOH . 
O 3 HOH C 22 422 67 HOH HOH . 
O 3 HOH C 23 423 146 HOH HOH . 
O 3 HOH C 24 424 21 HOH HOH . 
O 3 HOH C 25 425 57 HOH HOH . 
O 3 HOH C 26 426 61 HOH HOH . 
O 3 HOH C 27 427 58 HOH HOH . 
O 3 HOH C 28 428 44 HOH HOH . 
O 3 HOH C 29 429 143 HOH HOH . 
O 3 HOH C 30 430 162 HOH HOH . 
O 3 HOH C 31 431 73 HOH HOH . 
O 3 HOH C 32 432 173 HOH HOH . 
O 3 HOH C 33 433 183 HOH HOH . 
P 3 HOH D 1 401 131 HOH HOH . 
P 3 HOH D 2 402 130 HOH HOH . 
P 3 HOH D 3 403 168 HOH HOH . 
P 3 HOH D 4 404 108 HOH HOH . 
P 3 HOH D 5 405 145 HOH HOH . 
P 3 HOH D 6 406 149 HOH HOH . 
P 3 HOH D 7 407 184 HOH HOH . 
P 3 HOH D 8 408 99 HOH HOH . 
P 3 HOH D 9 409 70 HOH HOH . 
P 3 HOH D 10 410 79 HOH HOH . 
P 3 HOH D 11 411 66 HOH HOH . 
P 3 HOH D 12 412 30 HOH HOH . 
P 3 HOH D 13 413 148 HOH HOH . 
P 3 HOH D 14 414 97 HOH HOH . 
P 3 HOH D 15 415 87 HOH HOH . 
P 3 HOH D 16 416 125 HOH HOH . 
P 3 HOH D 17 417 47 HOH HOH . 
P 3 HOH D 18 418 62 HOH HOH . 
P 3 HOH D 19 419 6 HOH HOH . 
P 3 HOH D 20 420 103 HOH HOH . 
P 3 HOH D 21 421 16 HOH HOH . 
P 3 HOH D 22 422 53 HOH HOH . 
P 3 HOH D 23 423 38 HOH HOH . 
P 3 HOH D 24 424 118 HOH HOH . 
P 3 HOH D 25 425 106 HOH HOH . 
P 3 HOH D 26 426 167 HOH HOH . 
P 3 HOH D 27 427 140 HOH HOH . 
P 3 HOH D 28 428 94 HOH HOH . 
P 3 HOH D 29 429 71 HOH HOH . 
P 3 HOH D 30 430 157 HOH HOH . 
P 3 HOH D 31 431 160 HOH HOH . 
P 3 HOH D 32 432 163 HOH HOH . 
P 3 HOH D 33 433 158 HOH HOH . 
P 3 HOH D 34 434 25 HOH HOH . 
P 3 HOH D 35 435 154 HOH HOH . 
Q 3 HOH E 1 401 141 HOH HOH . 
Q 3 HOH E 2 402 75 HOH HOH . 
Q 3 HOH E 3 403 60 HOH HOH . 
Q 3 HOH E 4 404 86 HOH HOH . 
Q 3 HOH E 5 405 20 HOH HOH . 
Q 3 HOH E 6 406 165 HOH HOH . 
Q 3 HOH E 7 407 22 HOH HOH . 
Q 3 HOH E 8 408 98 HOH HOH . 
Q 3 HOH E 9 409 95 HOH HOH . 
Q 3 HOH E 10 410 151 HOH HOH . 
Q 3 HOH E 11 411 135 HOH HOH . 
Q 3 HOH E 12 412 128 HOH HOH . 
Q 3 HOH E 13 413 46 HOH HOH . 
Q 3 HOH E 14 414 111 HOH HOH . 
Q 3 HOH E 15 415 51 HOH HOH . 
Q 3 HOH E 16 416 55 HOH HOH . 
Q 3 HOH E 17 417 114 HOH HOH . 
Q 3 HOH E 18 418 18 HOH HOH . 
Q 3 HOH E 19 419 115 HOH HOH . 
Q 3 HOH E 20 420 56 HOH HOH . 
Q 3 HOH E 21 421 27 HOH HOH . 
Q 3 HOH E 22 422 78 HOH HOH . 
Q 3 HOH E 23 423 74 HOH HOH . 
Q 3 HOH E 24 424 129 HOH HOH . 
Q 3 HOH E 25 425 174 HOH HOH . 
Q 3 HOH E 26 426 147 HOH HOH . 
Q 3 HOH E 27 427 123 HOH HOH . 
Q 3 HOH E 28 428 40 HOH HOH . 
Q 3 HOH E 29 429 126 HOH HOH . 
Q 3 HOH E 30 430 39 HOH HOH . 
Q 3 HOH E 31 431 138 HOH HOH . 
Q 3 HOH E 32 432 43 HOH HOH . 
Q 3 HOH E 33 433 155 HOH HOH . 
Q 3 HOH E 34 434 15 HOH HOH . 
Q 3 HOH E 35 435 35 HOH HOH . 
Q 3 HOH E 36 436 8 HOH HOH . 
Q 3 HOH E 37 437 24 HOH HOH . 
Q 3 HOH E 38 438 2 HOH HOH . 
R 3 HOH F 1 301 4 HOH HOH . 
R 3 HOH F 2 302 187 HOH HOH . 
R 3 HOH F 3 303 119 HOH HOH . 
R 3 HOH F 4 304 152 HOH HOH . 
R 3 HOH F 5 305 81 HOH HOH . 
R 3 HOH F 6 306 93 HOH HOH . 
R 3 HOH F 7 307 42 HOH HOH . 
R 3 HOH F 8 308 31 HOH HOH . 
R 3 HOH F 9 309 109 HOH HOH . 
R 3 HOH F 10 310 59 HOH HOH . 
R 3 HOH F 11 311 116 HOH HOH . 
R 3 HOH F 12 312 52 HOH HOH . 
R 3 HOH F 13 313 166 HOH HOH . 
R 3 HOH F 14 314 82 HOH HOH . 
R 3 HOH F 15 315 49 HOH HOH . 
R 3 HOH F 16 316 34 HOH HOH . 
R 3 HOH F 17 317 96 HOH HOH . 
R 3 HOH F 18 318 110 HOH HOH . 
R 3 HOH F 19 319 107 HOH HOH . 
R 3 HOH F 20 320 83 HOH HOH . 
R 3 HOH F 21 321 17 HOH HOH . 
R 3 HOH F 22 322 161 HOH HOH . 
R 3 HOH F 23 323 159 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3 6HY . . . J 2 -21.128 -59.18 10.058 1 20 ? O3 6HY 301 D 1 
HETATM 2 C C8 6HY . . . J 2 -21.395 -58.221 9.38 1 20 ? C8 6HY 301 D 1 
HETATM 3 O O2 6HY . . . J 2 -20.847 -57.922 8.332 1 20 ? O2 6HY 301 D 1 
HETATM 4 C C3 6HY . . . J 2 -22.577 -57.429 9.847 1 20 ? C3 6HY 301 D 1 
HETATM 5 C C 6HY . . . J 2 -22.277 -55.966 9.888 1 20 ? C 6HY 301 D 1 
HETATM 6 C C1 6HY . . . J 2 -22.842 -55.239 8.697 1 20 ? C1 6HY 301 D 1 
HETATM 7 O O 6HY . . . J 2 -23.302 -55.857 7.777 1 20 ? O 6HY 301 D 1 
HETATM 8 C C2 6HY . . . J 2 -22.86 -53.855 8.725 1 20 ? C2 6HY 301 D 1 
HETATM 9 C C5 6HY . . . J 2 -22.381 -53.122 9.798 1 20 ? C5 6HY 301 D 1 
HETATM 10 C C6 6HY . . . J 2 -22.419 -51.756 9.79 1 20 ? C6 6HY 301 D 1 
HETATM 11 C C7 6HY . . . J 2 -22.961 -51.142 8.697 1 20 ? C7 6HY 301 D 1 
HETATM 12 O O1 6HY . . . J 2 -23.025 -49.946 8.623 1 20 ? O1 6HY 301 D 1 
HETATM 13 N N 6HY . . . J 2 -23.409 -51.88 7.667 1 20 ? N 6HY 301 D 1 
HETATM 14 C C4 6HY . . . J 2 -23.368 -53.164 7.669 1 20 ? C4 6HY 301 D 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           246 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#