data_5FHZ
#
_model_server_result.job_id            4tnN2WdWQJRzeOyqsHBrjQ 
_model_server_result.datetime_utc      '2024-12-21 13:52:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fhz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":601}' 
#
_entry.id    5FHZ 
#
_exptl.entry_id    5FHZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.69 
_cell.angle_gamma         90 
_cell.entry_id            5FHZ 
_cell.length_a            82.656 
_cell.length_b            159.785 
_cell.length_c            177.647 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FHZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,N,O,P,U,V,W,X 1 1 
E,F,G,H,Q,R,S,T,Y,Z,AA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 K N N 
? 2 M N N 
? 2 O N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 237 n n 
PA O2A NAD sing 238 n n 
PA O5B NAD sing 239 n n 
PA O3 NAD sing 240 n n 
O2A HOA2 NAD sing 241 n n 
O5B C5B NAD sing 242 n n 
C5B C4B NAD sing 243 n n 
C5B H51A NAD sing 244 n n 
C5B H52A NAD sing 245 n n 
C4B O4B NAD sing 246 n n 
C4B C3B NAD sing 247 n n 
C4B H4B NAD sing 248 n n 
O4B C1B NAD sing 249 n n 
C3B O3B NAD sing 250 n n 
C3B C2B NAD sing 251 n n 
C3B H3B NAD sing 252 n n 
O3B HO3A NAD sing 253 n n 
C2B O2B NAD sing 254 n n 
C2B C1B NAD sing 255 n n 
C2B H2B NAD sing 256 n n 
O2B HO2A NAD sing 257 n n 
C1B N9A NAD sing 258 n n 
C1B H1B NAD sing 259 n n 
N9A C8A NAD sing 260 n y 
N9A C4A NAD sing 261 n y 
C8A N7A NAD doub 262 n y 
C8A H8A NAD sing 263 n n 
N7A C5A NAD sing 264 n y 
C5A C6A NAD sing 265 n y 
C5A C4A NAD doub 266 n y 
C6A N6A NAD sing 267 n n 
C6A N1A NAD doub 268 n y 
N6A H61A NAD sing 269 n n 
N6A H62A NAD sing 270 n n 
N1A C2A NAD sing 271 n y 
C2A N3A NAD doub 272 n y 
C2A H2A NAD sing 273 n n 
N3A C4A NAD sing 274 n y 
O3 PN NAD sing 275 n n 
PN O1N NAD doub 276 n n 
PN O2N NAD sing 277 n n 
PN O5D NAD sing 278 n n 
O5D C5D NAD sing 279 n n 
C5D C4D NAD sing 280 n n 
C5D H51N NAD sing 281 n n 
C5D H52N NAD sing 282 n n 
C4D O4D NAD sing 283 n n 
C4D C3D NAD sing 284 n n 
C4D H4D NAD sing 285 n n 
O4D C1D NAD sing 286 n n 
C3D O3D NAD sing 287 n n 
C3D C2D NAD sing 288 n n 
C3D H3D NAD sing 289 n n 
O3D HO3N NAD sing 290 n n 
C2D O2D NAD sing 291 n n 
C2D C1D NAD sing 292 n n 
C2D H2D NAD sing 293 n n 
O2D HO2N NAD sing 294 n n 
C1D N1N NAD sing 295 n n 
C1D H1D NAD sing 296 n n 
N1N C2N NAD sing 297 n y 
N1N C6N NAD doub 298 n y 
C2N C3N NAD doub 299 n y 
C2N H2N NAD sing 300 n n 
C3N C7N NAD sing 301 n n 
C3N C4N NAD sing 302 n y 
C7N O7N NAD doub 303 n n 
C7N N7N NAD sing 304 n n 
N7N H71N NAD sing 305 n n 
N7N H72N NAD sing 306 n n 
C4N C5N NAD doub 307 n y 
C4N H4N NAD sing 308 n n 
C5N C6N NAD sing 309 n y 
C5N H5N NAD sing 310 n n 
C6N H6N NAD sing 311 n n 
#
_atom_sites.entry_id                     5FHZ 
_atom_sites.fract_transf_matrix[1][1]    0.012098 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00078 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006258 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005641 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 NAD A 1 601 1 NAD NAD . 
J 3 REA A 1 602 1 REA REA . 
K 2 NAD B 1 601 2 NAD NAD . 
L 3 REA B 1 602 2 REA REA . 
M 2 NAD C 1 601 3 NAD NAD . 
N 3 REA C 1 602 3 REA REA . 
O 2 NAD D 1 601 4 NAD NAD . 
P 3 REA D 1 602 4 REA REA . 
Q 2 NAD E 1 601 5 NAD NAD . 
R 2 NAD F 1 601 6 NAD NAD . 
S 2 NAD G 1 601 7 NAD NAD . 
T 2 NAD H 1 601 8 NAD NAD . 
U 4 HOH A 1 701 63 HOH HOH . 
U 4 HOH A 2 702 30 HOH HOH . 
U 4 HOH A 3 703 45 HOH HOH . 
U 4 HOH A 4 704 60 HOH HOH . 
U 4 HOH A 5 705 21 HOH HOH . 
U 4 HOH A 6 706 47 HOH HOH . 
U 4 HOH A 7 707 43 HOH HOH . 
U 4 HOH A 8 708 28 HOH HOH . 
U 4 HOH A 9 709 33 HOH HOH . 
U 4 HOH A 10 710 38 HOH HOH . 
U 4 HOH A 11 711 26 HOH HOH . 
U 4 HOH A 12 712 32 HOH HOH . 
U 4 HOH A 13 713 12 HOH HOH . 
U 4 HOH A 14 714 20 HOH HOH . 
U 4 HOH A 15 715 4 HOH HOH . 
U 4 HOH A 16 716 41 HOH HOH . 
U 4 HOH A 17 717 34 HOH HOH . 
U 4 HOH A 18 718 8 HOH HOH . 
U 4 HOH A 19 719 50 HOH HOH . 
V 4 HOH B 1 701 11 HOH HOH . 
V 4 HOH B 2 702 55 HOH HOH . 
V 4 HOH B 3 703 7 HOH HOH . 
V 4 HOH B 4 704 62 HOH HOH . 
V 4 HOH B 5 705 39 HOH HOH . 
V 4 HOH B 6 706 24 HOH HOH . 
V 4 HOH B 7 707 22 HOH HOH . 
V 4 HOH B 8 708 13 HOH HOH . 
V 4 HOH B 9 709 19 HOH HOH . 
V 4 HOH B 10 710 44 HOH HOH . 
V 4 HOH B 11 711 56 HOH HOH . 
V 4 HOH B 12 712 3 HOH HOH . 
V 4 HOH B 13 713 54 HOH HOH . 
V 4 HOH B 14 714 16 HOH HOH . 
V 4 HOH B 15 715 53 HOH HOH . 
W 4 HOH C 1 701 35 HOH HOH . 
W 4 HOH C 2 702 49 HOH HOH . 
W 4 HOH C 3 703 25 HOH HOH . 
W 4 HOH C 4 704 15 HOH HOH . 
W 4 HOH C 5 705 17 HOH HOH . 
W 4 HOH C 6 706 14 HOH HOH . 
W 4 HOH C 7 707 31 HOH HOH . 
W 4 HOH C 8 708 48 HOH HOH . 
W 4 HOH C 9 709 51 HOH HOH . 
X 4 HOH D 1 701 52 HOH HOH . 
X 4 HOH D 2 702 58 HOH HOH . 
X 4 HOH D 3 703 40 HOH HOH . 
X 4 HOH D 4 704 1 HOH HOH . 
X 4 HOH D 5 705 23 HOH HOH . 
X 4 HOH D 6 706 61 HOH HOH . 
X 4 HOH D 7 707 5 HOH HOH . 
X 4 HOH D 8 708 18 HOH HOH . 
X 4 HOH D 9 709 46 HOH HOH . 
X 4 HOH D 10 710 36 HOH HOH . 
X 4 HOH D 11 711 2 HOH HOH . 
X 4 HOH D 12 712 57 HOH HOH . 
Y 4 HOH E 1 701 10 HOH HOH . 
Y 4 HOH E 2 702 27 HOH HOH . 
Z 4 HOH F 1 701 59 HOH HOH . 
Z 4 HOH F 2 702 29 HOH HOH . 
Z 4 HOH F 3 703 6 HOH HOH . 
Z 4 HOH F 4 704 9 HOH HOH . 
AA 4 HOH H 1 701 42 HOH HOH . 
AA 4 HOH H 2 702 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . M 2 4.099 29.01 92.317 1 18.48 ? PA NAD 601 C 1 
HETATM 2 O O1A NAD . . . M 2 5.579 29.233 92.171 1 18.61 ? O1A NAD 601 C 1 
HETATM 3 O O2A NAD . . . M 2 3.567 27.629 92.637 1 23.17 ? O2A NAD 601 C 1 
HETATM 4 O O5B NAD . . . M 2 3.493 29.389 90.896 1 17.79 ? O5B NAD 601 C 1 
HETATM 5 C C5B NAD . . . M 2 2.425 30.283 90.793 1 18.26 ? C5B NAD 601 C 1 
HETATM 6 C C4B NAD . . . M 2 2.269 30.596 89.326 1 17.06 ? C4B NAD 601 C 1 
HETATM 7 O O4B NAD . . . M 2 3.309 29.934 88.603 1 17.29 ? O4B NAD 601 C 1 
HETATM 8 C C3B NAD . . . M 2 0.945 30.069 88.798 1 16.66 ? C3B NAD 601 C 1 
HETATM 9 O O3B NAD . . . M 2 0.402 30.948 87.806 1 16.31 ? O3B NAD 601 C 1 
HETATM 10 C C2B NAD . . . M 2 1.348 28.729 88.235 1 16.31 ? C2B NAD 601 C 1 
HETATM 11 O O2B NAD . . . M 2 0.415 28.26 87.261 1 15.77 ? O2B NAD 601 C 1 
HETATM 12 C C1B NAD . . . M 2 2.734 29.028 87.69 1 16.22 ? C1B NAD 601 C 1 
HETATM 13 N N9A NAD . . . M 2 3.626 27.882 87.674 1 14.96 ? N9A NAD 601 C 1 
HETATM 14 C C8A NAD . . . M 2 3.842 27.052 88.684 1 17.74 ? C8A NAD 601 C 1 
HETATM 15 N N7A NAD . . . M 2 4.733 26.086 88.325 1 19.51 ? N7A NAD 601 C 1 
HETATM 16 C C5A NAD . . . M 2 5.101 26.335 87.079 1 15.97 ? C5A NAD 601 C 1 
HETATM 17 C C6A NAD . . . M 2 5.997 25.718 86.121 1 15.31 ? C6A NAD 601 C 1 
HETATM 18 N N6A NAD . . . M 2 6.691 24.621 86.447 1 18.4 ? N6A NAD 601 C 1 
HETATM 19 N N1A NAD . . . M 2 6.101 26.264 84.909 1 16.61 ? N1A NAD 601 C 1 
HETATM 20 C C2A NAD . . . M 2 5.405 27.349 84.575 1 15.4 ? C2A NAD 601 C 1 
HETATM 21 N N3A NAD . . . M 2 4.557 27.949 85.409 1 15.82 ? N3A NAD 601 C 1 
HETATM 22 C C4A NAD . . . M 2 4.371 27.509 86.656 1 15.52 ? C4A NAD 601 C 1 
HETATM 23 O O3 NAD . . . M 2 3.682 30.035 93.483 1 21.59 ? O3 NAD 601 C 1 
HETATM 24 P PN NAD . . . M 2 2.305 30.042 94.321 1 22.36 ? PN NAD 601 C 1 
HETATM 25 O O1N NAD . . . M 2 1.216 29.736 93.313 1 23.16 ? O1N NAD 601 C 1 
HETATM 26 O O2N NAD . . . M 2 2.185 31.352 95.076 1 20.44 ? O2N NAD 601 C 1 
HETATM 27 O O5D NAD . . . M 2 2.388 28.905 95.472 1 26.17 ? O5D NAD 601 C 1 
HETATM 28 C C5D NAD . . . M 2 3.334 27.839 95.598 1 32.63 ? C5D NAD 601 C 1 
HETATM 29 C C4D NAD . . . M 2 2.586 26.501 95.514 1 41.17 ? C4D NAD 601 C 1 
HETATM 30 O O4D NAD . . . M 2 3.464 25.367 95.452 1 45.43 ? O4D NAD 601 C 1 
HETATM 31 C C3D NAD . . . M 2 1.705 26.288 96.743 1 46.67 ? C3D NAD 601 C 1 
HETATM 32 O O3D NAD . . . M 2 0.339 26.426 96.395 1 45.4 ? O3D NAD 601 C 1 
HETATM 33 C C2D NAD . . . M 2 1.939 24.877 97.229 1 54.58 ? C2D NAD 601 C 1 
HETATM 34 O O2D NAD . . . M 2 0.862 23.986 96.917 1 56.3 ? O2D NAD 601 C 1 
HETATM 35 C C1D NAD . . . M 2 3.168 24.396 96.487 1 57.09 ? C1D NAD 601 C 1 
HETATM 36 N N1N NAD . . . M 2 4.23 24.14 97.511 1 66.04 ? N1N NAD 601 C 1 
HETATM 37 C C2N NAD . . . M 2 4.267 22.9 98.068 1 63.92 ? C2N NAD 601 C 1 
HETATM 38 C C3N NAD . . . M 2 5.227 22.567 99.022 1 64.08 ? C3N NAD 601 C 1 
HETATM 39 C C7N NAD . . . M 2 5.216 21.186 99.611 1 65.77 ? C7N NAD 601 C 1 
HETATM 40 O O7N NAD . . . M 2 4.784 21.055 100.748 1 70.15 ? O7N NAD 601 C 1 
HETATM 41 N N7N NAD . . . M 2 5.648 20.142 98.9 1 62.06 ? N7N NAD 601 C 1 
HETATM 42 C C4N NAD . . . M 2 6.149 23.529 99.434 1 63.57 ? C4N NAD 601 C 1 
HETATM 43 C C5N NAD . . . M 2 6.098 24.802 98.864 1 62.61 ? C5N NAD 601 C 1 
HETATM 44 C C6N NAD . . . M 2 5.124 25.092 97.899 1 63.79 ? C6N NAD 601 C 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    41 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           44 
#