data_5FHZ
#
_model_server_result.job_id            YN_Kl5RJqFH97xBdYI_0Og 
_model_server_result.datetime_utc      '2024-12-21 14:24:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fhz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":602}' 
#
_entry.id    5FHZ 
#
_exptl.entry_id    5FHZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              300.435 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'RETINOIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.69 
_cell.angle_gamma         90 
_cell.entry_id            5FHZ 
_cell.length_a            82.656 
_cell.length_b            159.785 
_cell.length_c            177.647 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FHZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,N,O,P,U,V,W,X 1 1 
E,F,G,H,Q,R,S,T,Y,Z,AA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 J N N 
? 3 L N N 
? 3 N N N 
? 3 P N N 
#
_chem_comp.formula           'C20 H28 O2' 
_chem_comp.formula_weight    300.435 
_chem_comp.id                REA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'RETINOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 REA sing 352 n n 
C1 C6 REA sing 353 n n 
C1 C16 REA sing 354 n n 
C1 C17 REA sing 355 n n 
C2 C3 REA sing 356 n n 
C2 H21 REA sing 357 n n 
C2 H22 REA sing 358 n n 
C3 C4 REA sing 359 n n 
C3 H31 REA sing 360 n n 
C3 H32 REA sing 361 n n 
C4 C5 REA sing 362 n n 
C4 H41 REA sing 363 n n 
C4 H42 REA sing 364 n n 
C5 C6 REA doub 365 n n 
C5 C18 REA sing 366 n n 
C6 C7 REA sing 367 n n 
C7 C8 REA doub 368 e n 
C7 H7 REA sing 369 n n 
C8 C9 REA sing 370 n n 
C8 H8 REA sing 371 n n 
C9 C10 REA doub 372 e n 
C9 C19 REA sing 373 n n 
C10 C11 REA sing 374 n n 
C10 H10 REA sing 375 n n 
C11 C12 REA doub 376 e n 
C11 H11 REA sing 377 n n 
C12 C13 REA sing 378 n n 
C12 H12 REA sing 379 n n 
C13 C14 REA doub 380 e n 
C13 C20 REA sing 381 n n 
C14 C15 REA sing 382 n n 
C14 H14 REA sing 383 n n 
C15 O1 REA doub 384 n n 
C15 O2 REA sing 385 n n 
C16 H161 REA sing 386 n n 
C16 H162 REA sing 387 n n 
C16 H163 REA sing 388 n n 
C17 H171 REA sing 389 n n 
C17 H172 REA sing 390 n n 
C17 H173 REA sing 391 n n 
C18 H181 REA sing 392 n n 
C18 H182 REA sing 393 n n 
C18 H183 REA sing 394 n n 
C19 H191 REA sing 395 n n 
C19 H192 REA sing 396 n n 
C19 H193 REA sing 397 n n 
C20 H201 REA sing 398 n n 
C20 H202 REA sing 399 n n 
C20 H203 REA sing 400 n n 
O2 HO2 REA sing 401 n n 
#
_atom_sites.entry_id                     5FHZ 
_atom_sites.fract_transf_matrix[1][1]    0.012098 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00078 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006258 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005641 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 NAD A 1 601 1 NAD NAD . 
J 3 REA A 1 602 1 REA REA . 
K 2 NAD B 1 601 2 NAD NAD . 
L 3 REA B 1 602 2 REA REA . 
M 2 NAD C 1 601 3 NAD NAD . 
N 3 REA C 1 602 3 REA REA . 
O 2 NAD D 1 601 4 NAD NAD . 
P 3 REA D 1 602 4 REA REA . 
Q 2 NAD E 1 601 5 NAD NAD . 
R 2 NAD F 1 601 6 NAD NAD . 
S 2 NAD G 1 601 7 NAD NAD . 
T 2 NAD H 1 601 8 NAD NAD . 
U 4 HOH A 1 701 63 HOH HOH . 
U 4 HOH A 2 702 30 HOH HOH . 
U 4 HOH A 3 703 45 HOH HOH . 
U 4 HOH A 4 704 60 HOH HOH . 
U 4 HOH A 5 705 21 HOH HOH . 
U 4 HOH A 6 706 47 HOH HOH . 
U 4 HOH A 7 707 43 HOH HOH . 
U 4 HOH A 8 708 28 HOH HOH . 
U 4 HOH A 9 709 33 HOH HOH . 
U 4 HOH A 10 710 38 HOH HOH . 
U 4 HOH A 11 711 26 HOH HOH . 
U 4 HOH A 12 712 32 HOH HOH . 
U 4 HOH A 13 713 12 HOH HOH . 
U 4 HOH A 14 714 20 HOH HOH . 
U 4 HOH A 15 715 4 HOH HOH . 
U 4 HOH A 16 716 41 HOH HOH . 
U 4 HOH A 17 717 34 HOH HOH . 
U 4 HOH A 18 718 8 HOH HOH . 
U 4 HOH A 19 719 50 HOH HOH . 
V 4 HOH B 1 701 11 HOH HOH . 
V 4 HOH B 2 702 55 HOH HOH . 
V 4 HOH B 3 703 7 HOH HOH . 
V 4 HOH B 4 704 62 HOH HOH . 
V 4 HOH B 5 705 39 HOH HOH . 
V 4 HOH B 6 706 24 HOH HOH . 
V 4 HOH B 7 707 22 HOH HOH . 
V 4 HOH B 8 708 13 HOH HOH . 
V 4 HOH B 9 709 19 HOH HOH . 
V 4 HOH B 10 710 44 HOH HOH . 
V 4 HOH B 11 711 56 HOH HOH . 
V 4 HOH B 12 712 3 HOH HOH . 
V 4 HOH B 13 713 54 HOH HOH . 
V 4 HOH B 14 714 16 HOH HOH . 
V 4 HOH B 15 715 53 HOH HOH . 
W 4 HOH C 1 701 35 HOH HOH . 
W 4 HOH C 2 702 49 HOH HOH . 
W 4 HOH C 3 703 25 HOH HOH . 
W 4 HOH C 4 704 15 HOH HOH . 
W 4 HOH C 5 705 17 HOH HOH . 
W 4 HOH C 6 706 14 HOH HOH . 
W 4 HOH C 7 707 31 HOH HOH . 
W 4 HOH C 8 708 48 HOH HOH . 
W 4 HOH C 9 709 51 HOH HOH . 
X 4 HOH D 1 701 52 HOH HOH . 
X 4 HOH D 2 702 58 HOH HOH . 
X 4 HOH D 3 703 40 HOH HOH . 
X 4 HOH D 4 704 1 HOH HOH . 
X 4 HOH D 5 705 23 HOH HOH . 
X 4 HOH D 6 706 61 HOH HOH . 
X 4 HOH D 7 707 5 HOH HOH . 
X 4 HOH D 8 708 18 HOH HOH . 
X 4 HOH D 9 709 46 HOH HOH . 
X 4 HOH D 10 710 36 HOH HOH . 
X 4 HOH D 11 711 2 HOH HOH . 
X 4 HOH D 12 712 57 HOH HOH . 
Y 4 HOH E 1 701 10 HOH HOH . 
Y 4 HOH E 2 702 27 HOH HOH . 
Z 4 HOH F 1 701 59 HOH HOH . 
Z 4 HOH F 2 702 29 HOH HOH . 
Z 4 HOH F 3 703 6 HOH HOH . 
Z 4 HOH F 4 704 9 HOH HOH . 
AA 4 HOH H 1 701 42 HOH HOH . 
AA 4 HOH H 2 702 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 REA . . . N 3 -0.814 48.564 94.44 1 18.02 ? C1 REA 602 C 1 
HETATM 2 C C2 REA . . . N 3 -1.283 49.376 93.23 1 12.59 ? C2 REA 602 C 1 
HETATM 3 C C3 REA . . . N 3 -1.448 50.861 93.537 1 15.62 ? C3 REA 602 C 1 
HETATM 4 C C4 REA . . . N 3 -1.235 51.269 95.01 1 17.21 ? C4 REA 602 C 1 
HETATM 5 C C5 REA . . . N 3 -1.81 50.241 95.955 1 20.28 ? C5 REA 602 C 1 
HETATM 6 C C6 REA . . . N 3 -1.344 48.972 95.832 1 20.73 ? C6 REA 602 C 1 
HETATM 7 C C7 REA . . . N 3 -1.285 47.974 96.969 1 20.5 ? C7 REA 602 C 1 
HETATM 8 C C8 REA . . . N 3 -1.394 48.394 98.245 1 28.1 ? C8 REA 602 C 1 
HETATM 9 C C9 REA . . . N 3 -1.386 47.501 99.433 1 33.73 ? C9 REA 602 C 1 
HETATM 10 C C10 REA . . . N 3 -1.871 48.073 100.58 1 35.09 ? C10 REA 602 C 1 
HETATM 11 C C11 REA . . . N 3 -2.036 47.365 101.851 1 36.49 ? C11 REA 602 C 1 
HETATM 12 C C12 REA . . . N 3 -2.667 47.964 102.879 0 45.9 ? C12 REA 602 C 1 
HETATM 13 C C13 REA . . . N 3 -2.927 47.167 104.102 0 59.19 ? C13 REA 602 C 1 
HETATM 14 C C14 REA . . . N 3 -3.669 47.615 105.137 0 74.89 ? C14 REA 602 C 1 
HETATM 15 C C15 REA . . . N 3 -3.98 46.798 106.347 0 85.06 ? C15 REA 602 C 1 
HETATM 16 C C16 REA . . . N 3 0.696 48.685 94.417 1 19.76 ? C16 REA 602 C 1 
HETATM 17 C C17 REA . . . N 3 -1.159 47.105 94.233 1 15.42 ? C17 REA 602 C 1 
HETATM 18 C C18 REA . . . N 3 -2.93 50.668 96.895 1 19.38 ? C18 REA 602 C 1 
HETATM 19 C C19 REA . . . N 3 -0.943 46.051 99.287 1 29.81 ? C19 REA 602 C 1 
HETATM 20 C C20 REA . . . N 3 -2.442 45.754 104.051 0 49.8 ? C20 REA 602 C 1 
HETATM 21 O O1 REA . . . N 3 -4.581 47.373 107.267 0 85.69 ? O1 REA 602 C 1 
HETATM 22 O O2 REA . . . N 3 -3.706 45.578 106.468 0 75.03 ? O2 REA 602 C 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    94 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           22 
#