data_5FI8 # _model_server_result.job_id xQH0NgKZLD6qyxIjbwtAcw _model_server_result.datetime_utc '2024-11-05 15:36:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fi8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 5FI8 # _exptl.entry_id 5FI8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 422.27 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[1,1-bis(fluoranyl)ethyl]-~{N}-[(2~{S})-7-bromanyl-1,2,3,4-tetrahydronaphthalen-2-yl]-5-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-7-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5FI8 _cell.length_a 86.147 _cell.length_b 86.147 _cell.length_c 139.053 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FI8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H18 Br F2 N5' _chem_comp.formula_weight 422.27 _chem_comp.id 5Y5 _chem_comp.mon_nstd_flag . _chem_comp.name 2-[1,1-bis(fluoranyl)ethyl]-~{N}-[(2~{S})-7-bromanyl-1,2,3,4-tetrahydronaphthalen-2-yl]-5-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-7-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C9 5Y5 sing 1 n n N5 C9 5Y5 doub 2 n y N5 C11 5Y5 sing 3 n y C9 C8 5Y5 sing 4 n y C11 N4 5Y5 doub 5 n y C11 N2 5Y5 sing 6 n y N4 C12 5Y5 sing 7 n y C8 C7 5Y5 doub 8 n y F2 C13 5Y5 sing 9 n n N2 C7 5Y5 sing 10 n y N2 N3 5Y5 sing 11 n y C7 N1 5Y5 sing 12 n n C12 C13 5Y5 sing 13 n n C12 N3 5Y5 doub 14 n y C13 C14 5Y5 sing 15 n n C13 F1 5Y5 sing 16 n n N1 C2 5Y5 sing 17 n n C2 C1 5Y5 sing 18 n n C2 C3 5Y5 sing 19 n n C1 C6 5Y5 sing 20 n n C3 C4 5Y5 sing 21 n n C6 C5 5Y5 sing 22 n n C4 C5 5Y5 doub 23 n y C4 C18 5Y5 sing 24 n y C5 C15 5Y5 sing 25 n y C18 C17 5Y5 doub 26 n y C15 C16 5Y5 doub 27 n y C17 C16 5Y5 sing 28 n y C17 BR1 5Y5 sing 29 n n C2 H2 5Y5 sing 30 n n C3 H32 5Y5 sing 31 n n C3 H31 5Y5 sing 32 n n C6 H61 5Y5 sing 33 n n C6 H62 5Y5 sing 34 n n C8 H8 5Y5 sing 35 n n C10 H103 5Y5 sing 36 n n C10 H101 5Y5 sing 37 n n C10 H102 5Y5 sing 38 n n C16 H16 5Y5 sing 39 n n C15 H15 5Y5 sing 40 n n C14 H142 5Y5 sing 41 n n C14 H143 5Y5 sing 42 n n C14 H141 5Y5 sing 43 n n C1 H11 5Y5 sing 44 n n C1 H12 5Y5 sing 45 n n C18 H18 5Y5 sing 46 n n N1 HN1 5Y5 sing 47 n n # _atom_sites.entry_id 5FI8 _atom_sites.fract_transf_matrix[1][1] 0.011608 _atom_sites.fract_transf_matrix[1][2] 0.006702 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013404 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007192 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5Y5 A 1 1001 1001 5Y5 D22 . C 3 FMN A 1 1002 1002 FMN FMN . D 4 ORO A 1 1003 1003 ORO ORO . E 5 LDA A 1 1004 2001 LDA LDA . F 6 HOH A 1 1101 62 HOH HOH . F 6 HOH A 2 1102 47 HOH HOH . F 6 HOH A 3 1103 40 HOH HOH . F 6 HOH A 4 1104 3 HOH HOH . F 6 HOH A 5 1105 35 HOH HOH . F 6 HOH A 6 1106 1 HOH HOH . F 6 HOH A 7 1107 44 HOH HOH . F 6 HOH A 8 1108 17 HOH HOH . F 6 HOH A 9 1109 24 HOH HOH . F 6 HOH A 10 1110 37 HOH HOH . F 6 HOH A 11 1111 13 HOH HOH . F 6 HOH A 12 1112 28 HOH HOH . F 6 HOH A 13 1113 20 HOH HOH . F 6 HOH A 14 1114 9 HOH HOH . F 6 HOH A 15 1115 50 HOH HOH . F 6 HOH A 16 1116 73 HOH HOH . F 6 HOH A 17 1117 2 HOH HOH . F 6 HOH A 18 1118 5 HOH HOH . F 6 HOH A 19 1119 7 HOH HOH . F 6 HOH A 20 1120 4 HOH HOH . F 6 HOH A 21 1121 58 HOH HOH . F 6 HOH A 22 1122 51 HOH HOH . F 6 HOH A 23 1123 54 HOH HOH . F 6 HOH A 24 1124 53 HOH HOH . F 6 HOH A 25 1125 75 HOH HOH . F 6 HOH A 26 1126 34 HOH HOH . F 6 HOH A 27 1127 52 HOH HOH . F 6 HOH A 28 1128 36 HOH HOH . F 6 HOH A 29 1129 10 HOH HOH . F 6 HOH A 30 1130 8 HOH HOH . F 6 HOH A 31 1131 11 HOH HOH . F 6 HOH A 32 1132 22 HOH HOH . F 6 HOH A 33 1133 25 HOH HOH . F 6 HOH A 34 1134 38 HOH HOH . F 6 HOH A 35 1135 16 HOH HOH . F 6 HOH A 36 1136 19 HOH HOH . F 6 HOH A 37 1137 12 HOH HOH . F 6 HOH A 38 1138 23 HOH HOH . F 6 HOH A 39 1139 60 HOH HOH . F 6 HOH A 40 1140 67 HOH HOH . F 6 HOH A 41 1141 42 HOH HOH . F 6 HOH A 42 1142 26 HOH HOH . F 6 HOH A 43 1143 21 HOH HOH . F 6 HOH A 44 1144 15 HOH HOH . F 6 HOH A 45 1145 64 HOH HOH . F 6 HOH A 46 1146 29 HOH HOH . F 6 HOH A 47 1147 27 HOH HOH . F 6 HOH A 48 1148 74 HOH HOH . F 6 HOH A 49 1149 45 HOH HOH . F 6 HOH A 50 1150 72 HOH HOH . F 6 HOH A 51 1151 41 HOH HOH . F 6 HOH A 52 1152 18 HOH HOH . F 6 HOH A 53 1153 59 HOH HOH . F 6 HOH A 54 1154 46 HOH HOH . F 6 HOH A 55 1155 30 HOH HOH . F 6 HOH A 56 1156 33 HOH HOH . F 6 HOH A 57 1157 76 HOH HOH . F 6 HOH A 58 1158 6 HOH HOH . F 6 HOH A 59 1159 39 HOH HOH . F 6 HOH A 60 1160 32 HOH HOH . F 6 HOH A 61 1161 31 HOH HOH . F 6 HOH A 62 1162 56 HOH HOH . F 6 HOH A 63 1163 65 HOH HOH . F 6 HOH A 64 1164 66 HOH HOH . F 6 HOH A 65 1165 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 5Y5 . . . B 2 -38.107 103.8 -14.574 1 21.2 ? C2 5Y5 1001 A 1 HETATM 2 C C3 5Y5 . . . B 2 -37.255 102.857 -13.734 1 24.48 ? C3 5Y5 1001 A 1 HETATM 3 C C4 5Y5 . . . B 2 -36.123 103.587 -13.061 1 18.83 ? C4 5Y5 1001 A 1 HETATM 4 C C5 5Y5 . . . B 2 -36.114 105.068 -12.946 1 22.84 ? C5 5Y5 1001 A 1 HETATM 5 C C6 5Y5 . . . B 2 -37.239 105.907 -13.511 1 16.89 ? C6 5Y5 1001 A 1 HETATM 6 C C7 5Y5 . . . B 2 -40.051 103.343 -16.058 1 24.46 ? C7 5Y5 1001 A 1 HETATM 7 C C8 5Y5 . . . B 2 -39.679 104.254 -17.051 1 32.52 ? C8 5Y5 1001 A 1 HETATM 8 C C10 5Y5 . . . B 2 -40.088 105.39 -19.256 1 38.6 ? C10 5Y5 1001 A 1 HETATM 9 C C17 5Y5 . . . B 2 -34.013 103.523 -11.904 1 30.88 ? C17 5Y5 1001 A 1 HETATM 10 C C16 5Y5 . . . B 2 -33.999 104.91 -11.799 1 20.12 ? C16 5Y5 1001 A 1 HETATM 11 C C15 5Y5 . . . B 2 -35.038 105.679 -12.317 1 18.45 ? C15 5Y5 1001 A 1 HETATM 12 C C14 5Y5 . . . B 2 -45.159 101.036 -15.454 1 25.75 ? C14 5Y5 1001 A 1 HETATM 13 C C13 5Y5 . . . B 2 -43.797 100.377 -15.578 1 27.26 ? C13 5Y5 1001 A 1 HETATM 14 C C12 5Y5 . . . B 2 -42.814 101.398 -16.058 1 19.05 ? C12 5Y5 1001 A 1 HETATM 15 C C11 5Y5 . . . B 2 -41.92 102.845 -17.329 1 36.78 ? C11 5Y5 1001 A 1 HETATM 16 C C1 5Y5 . . . B 2 -38.464 105.045 -13.78 1 18.72 ? C1 5Y5 1001 A 1 HETATM 17 BR BR1 5Y5 . . . B 2 -32.564 102.539 -11.187 1 23.03 ? BR1 5Y5 1001 A 1 HETATM 18 C C18 5Y5 . . . B 2 -35.065 102.861 -12.53 1 17.29 ? C18 5Y5 1001 A 1 HETATM 19 N N1 5Y5 . . . B 2 -39.338 103.121 -14.925 1 33.27 ? N1 5Y5 1001 A 1 HETATM 20 C C9 5Y5 . . . B 2 -40.481 104.419 -18.181 1 33.79 ? C9 5Y5 1001 A 1 HETATM 21 N N2 5Y5 . . . B 2 -41.182 102.664 -16.243 1 32.25 ? N2 5Y5 1001 A 1 HETATM 22 N N5 5Y5 . . . B 2 -41.614 103.705 -18.32 1 34.91 ? N5 5Y5 1001 A 1 HETATM 23 N N3 5Y5 . . . B 2 -41.706 101.722 -15.363 1 22.04 ? N3 5Y5 1001 A 1 HETATM 24 N N4 5Y5 . . . B 2 -42.988 102.028 -17.243 1 26.73 ? N4 5Y5 1001 A 1 HETATM 25 F F1 5Y5 . . . B 2 -43.439 99.89 -14.405 1 41.51 ? F1 5Y5 1001 A 1 HETATM 26 F F2 5Y5 . . . B 2 -43.86 99.406 -16.468 1 25.06 ? F2 5Y5 1001 A 1 HETATM 27 H H2 5Y5 . . . B 2 -37.561 104.082 -15.485 1 25.43 ? H2 5Y5 1001 A 1 HETATM 28 H H32 5Y5 . . . B 2 -36.849 102.07 -14.373 1 29.38 ? H32 5Y5 1001 A 1 HETATM 29 H H31 5Y5 . . . B 2 -37.881 102.381 -12.976 1 29.38 ? H31 5Y5 1001 A 1 HETATM 30 H H61 5Y5 . . . B 2 -36.912 106.379 -14.44 1 20.27 ? H61 5Y5 1001 A 1 HETATM 31 H H62 5Y5 . . . B 2 -37.496 106.698 -12.803 1 20.27 ? H62 5Y5 1001 A 1 HETATM 32 H H8 5Y5 . . . B 2 -38.768 104.83 -16.944 1 39.03 ? H8 5Y5 1001 A 1 HETATM 33 H H103 5Y5 . . . B 2 -40.815 105.376 -20.027 1 46.32 ? H103 5Y5 1001 A 1 HETATM 34 H H101 5Y5 . . . B 2 -39.146 105.114 -19.654 1 46.32 ? H101 5Y5 1001 A 1 HETATM 35 H H102 5Y5 . . . B 2 -40.027 106.365 -18.846 1 46.32 ? H102 5Y5 1001 A 1 HETATM 36 H H16 5Y5 . . . B 2 -33.167 105.4 -11.309 1 24.15 ? H16 5Y5 1001 A 1 HETATM 37 H H15 5Y5 . . . B 2 -35.009 106.757 -12.223 1 22.14 ? H15 5Y5 1001 A 1 HETATM 38 H H142 5Y5 . . . B 2 -45.459 101.408 -16.4 1 30.9 ? H142 5Y5 1001 A 1 HETATM 39 H H143 5Y5 . . . B 2 -45.866 100.325 -15.115 1 30.9 ? H143 5Y5 1001 A 1 HETATM 40 H H141 5Y5 . . . B 2 -45.103 101.836 -14.762 1 30.9 ? H141 5Y5 1001 A 1 HETATM 41 H H11 5Y5 . . . B 2 -39.202 105.628 -14.335 1 22.46 ? H11 5Y5 1001 A 1 HETATM 42 H H12 5Y5 . . . B 2 -38.917 104.752 -12.831 1 22.46 ? H12 5Y5 1001 A 1 HETATM 43 H H18 5Y5 . . . B 2 -35.058 101.78 -12.605 1 20.75 ? H18 5Y5 1001 A 1 HETATM 44 H HN1 5Y5 . . . B 2 -39.687 102.442 -14.265 1 39.92 ? HN1 5Y5 1001 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 44 #