data_5FI8
#
_model_server_result.job_id            UG2yQahcQrXKn7rcrZ100A 
_model_server_result.datetime_utc      '2024-11-05 15:27:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fi8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1004}' 
#
_entry.id    5FI8 
#
_exptl.entry_id    5FI8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              229.402 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURYL DIMETHYLAMINE-N-OXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5FI8 
_cell.length_a            86.147 
_cell.length_b            86.147 
_cell.length_c            139.053 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FI8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C14 H31 N O' 
_chem_comp.formula_weight    229.402 
_chem_comp.id                LDA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURYL DIMETHYLAMINE-N-OXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 O1 LDA sing 274 n n 
N1 CM1 LDA sing 275 n n 
N1 CM2 LDA sing 276 n n 
N1 C1 LDA sing 277 n n 
CM1 HM11 LDA sing 278 n n 
CM1 HM12 LDA sing 279 n n 
CM1 HM13 LDA sing 280 n n 
CM2 HM21 LDA sing 281 n n 
CM2 HM22 LDA sing 282 n n 
CM2 HM23 LDA sing 283 n n 
C1 C2 LDA sing 284 n n 
C1 H11 LDA sing 285 n n 
C1 H12 LDA sing 286 n n 
C2 C3 LDA sing 287 n n 
C2 H21 LDA sing 288 n n 
C2 H22 LDA sing 289 n n 
C3 C4 LDA sing 290 n n 
C3 H31 LDA sing 291 n n 
C3 H32 LDA sing 292 n n 
C4 C5 LDA sing 293 n n 
C4 H41 LDA sing 294 n n 
C4 H42 LDA sing 295 n n 
C5 C6 LDA sing 296 n n 
C5 H51 LDA sing 297 n n 
C5 H52 LDA sing 298 n n 
C6 C7 LDA sing 299 n n 
C6 H61 LDA sing 300 n n 
C6 H62 LDA sing 301 n n 
C7 C8 LDA sing 302 n n 
C7 H71 LDA sing 303 n n 
C7 H72 LDA sing 304 n n 
C8 C9 LDA sing 305 n n 
C8 H81 LDA sing 306 n n 
C8 H82 LDA sing 307 n n 
C9 C10 LDA sing 308 n n 
C9 H91 LDA sing 309 n n 
C9 H92 LDA sing 310 n n 
C10 C11 LDA sing 311 n n 
C10 H101 LDA sing 312 n n 
C10 H102 LDA sing 313 n n 
C11 C12 LDA sing 314 n n 
C11 H111 LDA sing 315 n n 
C11 H112 LDA sing 316 n n 
C12 H121 LDA sing 317 n n 
C12 H122 LDA sing 318 n n 
C12 H123 LDA sing 319 n n 
#
_atom_sites.entry_id                     5FI8 
_atom_sites.fract_transf_matrix[1][1]    0.011608 
_atom_sites.fract_transf_matrix[1][2]    0.006702 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013404 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007192 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 5Y5 A 1 1001 1001 5Y5 D22 . 
C 3 FMN A 1 1002 1002 FMN FMN . 
D 4 ORO A 1 1003 1003 ORO ORO . 
E 5 LDA A 1 1004 2001 LDA LDA . 
F 6 HOH A 1 1101 62 HOH HOH . 
F 6 HOH A 2 1102 47 HOH HOH . 
F 6 HOH A 3 1103 40 HOH HOH . 
F 6 HOH A 4 1104 3 HOH HOH . 
F 6 HOH A 5 1105 35 HOH HOH . 
F 6 HOH A 6 1106 1 HOH HOH . 
F 6 HOH A 7 1107 44 HOH HOH . 
F 6 HOH A 8 1108 17 HOH HOH . 
F 6 HOH A 9 1109 24 HOH HOH . 
F 6 HOH A 10 1110 37 HOH HOH . 
F 6 HOH A 11 1111 13 HOH HOH . 
F 6 HOH A 12 1112 28 HOH HOH . 
F 6 HOH A 13 1113 20 HOH HOH . 
F 6 HOH A 14 1114 9 HOH HOH . 
F 6 HOH A 15 1115 50 HOH HOH . 
F 6 HOH A 16 1116 73 HOH HOH . 
F 6 HOH A 17 1117 2 HOH HOH . 
F 6 HOH A 18 1118 5 HOH HOH . 
F 6 HOH A 19 1119 7 HOH HOH . 
F 6 HOH A 20 1120 4 HOH HOH . 
F 6 HOH A 21 1121 58 HOH HOH . 
F 6 HOH A 22 1122 51 HOH HOH . 
F 6 HOH A 23 1123 54 HOH HOH . 
F 6 HOH A 24 1124 53 HOH HOH . 
F 6 HOH A 25 1125 75 HOH HOH . 
F 6 HOH A 26 1126 34 HOH HOH . 
F 6 HOH A 27 1127 52 HOH HOH . 
F 6 HOH A 28 1128 36 HOH HOH . 
F 6 HOH A 29 1129 10 HOH HOH . 
F 6 HOH A 30 1130 8 HOH HOH . 
F 6 HOH A 31 1131 11 HOH HOH . 
F 6 HOH A 32 1132 22 HOH HOH . 
F 6 HOH A 33 1133 25 HOH HOH . 
F 6 HOH A 34 1134 38 HOH HOH . 
F 6 HOH A 35 1135 16 HOH HOH . 
F 6 HOH A 36 1136 19 HOH HOH . 
F 6 HOH A 37 1137 12 HOH HOH . 
F 6 HOH A 38 1138 23 HOH HOH . 
F 6 HOH A 39 1139 60 HOH HOH . 
F 6 HOH A 40 1140 67 HOH HOH . 
F 6 HOH A 41 1141 42 HOH HOH . 
F 6 HOH A 42 1142 26 HOH HOH . 
F 6 HOH A 43 1143 21 HOH HOH . 
F 6 HOH A 44 1144 15 HOH HOH . 
F 6 HOH A 45 1145 64 HOH HOH . 
F 6 HOH A 46 1146 29 HOH HOH . 
F 6 HOH A 47 1147 27 HOH HOH . 
F 6 HOH A 48 1148 74 HOH HOH . 
F 6 HOH A 49 1149 45 HOH HOH . 
F 6 HOH A 50 1150 72 HOH HOH . 
F 6 HOH A 51 1151 41 HOH HOH . 
F 6 HOH A 52 1152 18 HOH HOH . 
F 6 HOH A 53 1153 59 HOH HOH . 
F 6 HOH A 54 1154 46 HOH HOH . 
F 6 HOH A 55 1155 30 HOH HOH . 
F 6 HOH A 56 1156 33 HOH HOH . 
F 6 HOH A 57 1157 76 HOH HOH . 
F 6 HOH A 58 1158 6 HOH HOH . 
F 6 HOH A 59 1159 39 HOH HOH . 
F 6 HOH A 60 1160 32 HOH HOH . 
F 6 HOH A 61 1161 31 HOH HOH . 
F 6 HOH A 62 1162 56 HOH HOH . 
F 6 HOH A 63 1163 65 HOH HOH . 
F 6 HOH A 64 1164 66 HOH HOH . 
F 6 HOH A 65 1165 43 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 LDA . . . E 5 -22.54 109.702 -12.121 1 44.2 ? N1 LDA 1004 A 1 
HETATM 2 O O1 LDA . . . E 5 -21.399 110.174 -12.347 1 48.54 ? O1 LDA 1004 A 1 
HETATM 3 C CM1 LDA . . . E 5 -22.353 108.387 -11.472 1 61.48 ? CM1 LDA 1004 A 1 
HETATM 4 C CM2 LDA . . . E 5 -23.272 110.643 -11.246 1 47.08 ? CM2 LDA 1004 A 1 
HETATM 5 C C1 LDA . . . E 5 -23.261 109.531 -13.384 1 47.12 ? C1 LDA 1004 A 1 
HETATM 6 C C2 LDA . . . E 5 -23.039 110.747 -14.284 1 39.49 ? C2 LDA 1004 A 1 
HETATM 7 C C3 LDA . . . E 5 -24.235 110.956 -15.209 1 47.11 ? C3 LDA 1004 A 1 
HETATM 8 C C4 LDA . . . E 5 -23.819 111.162 -16.66 1 48.92 ? C4 LDA 1004 A 1 
HETATM 9 C C5 LDA . . . E 5 -25.067 111.266 -17.534 1 71.7 ? C5 LDA 1004 A 1 
HETATM 10 C C6 LDA . . . E 5 -24.737 111.235 -19.022 1 67.74 ? C6 LDA 1004 A 1 
HETATM 11 C C7 LDA . . . E 5 -25.797 110.48 -19.82 1 85.46 ? C7 LDA 1004 A 1 
HETATM 12 C C8 LDA . . . E 5 -26.954 111.392 -20.217 1 100.19 ? C8 LDA 1004 A 1 
HETATM 13 C C9 LDA . . . E 5 -28.161 110.575 -20.673 1 96.95 ? C9 LDA 1004 A 1 
HETATM 14 C C10 LDA . . . E 5 -28.738 111.058 -22.001 1 103.9 ? C10 LDA 1004 A 1 
HETATM 15 C C11 LDA . . . E 5 -28.184 110.241 -23.163 1 115.02 ? C11 LDA 1004 A 1 
HETATM 16 C C12 LDA . . . E 5 -28.45 110.914 -24.505 1 105.99 ? C12 LDA 1004 A 1 
HETATM 17 H HM11 LDA . . . E 5 -21.287 108.182 -11.365 1 73.78 ? HM11 LDA 1004 A 1 
HETATM 18 H HM12 LDA . . . E 5 -22.812 107.61 -12.085 1 73.78 ? HM12 LDA 1004 A 1 
HETATM 19 H HM13 LDA . . . E 5 -22.821 108.397 -10.488 1 73.78 ? HM13 LDA 1004 A 1 
HETATM 20 H HM21 LDA . . . E 5 -22.637 111.501 -11.023 1 56.5 ? HM21 LDA 1004 A 1 
HETATM 21 H HM22 LDA . . . E 5 -23.543 110.14 -10.318 1 56.5 ? HM22 LDA 1004 A 1 
HETATM 22 H HM23 LDA . . . E 5 -24.175 110.983 -11.753 1 56.5 ? HM23 LDA 1004 A 1 
HETATM 23 H H11 LDA . . . E 5 -22.908 108.631 -13.889 1 56.54 ? H11 LDA 1004 A 1 
HETATM 24 H H12 LDA . . . E 5 -24.326 109.411 -13.185 1 56.54 ? H12 LDA 1004 A 1 
HETATM 25 H H21 LDA . . . E 5 -22.138 110.6 -14.88 1 47.39 ? H21 LDA 1004 A 1 
HETATM 26 H H22 LDA . . . E 5 -22.894 111.635 -13.668 1 47.39 ? H22 LDA 1004 A 1 
HETATM 27 H H31 LDA . . . E 5 -24.893 110.09 -15.144 1 56.53 ? H31 LDA 1004 A 1 
HETATM 28 H H32 LDA . . . E 5 -24.8 111.826 -14.872 1 56.53 ? H32 LDA 1004 A 1 
HETATM 29 H H41 LDA . . . E 5 -23.228 112.073 -16.75 1 58.71 ? H41 LDA 1004 A 1 
HETATM 30 H H42 LDA . . . E 5 -23.206 110.324 -16.991 1 58.71 ? H42 LDA 1004 A 1 
HETATM 31 H H51 LDA . . . E 5 -25.739 110.441 -17.298 1 86.04 ? H51 LDA 1004 A 1 
HETATM 32 H H52 LDA . . . E 5 -25.59 112.194 -17.302 1 86.04 ? H52 LDA 1004 A 1 
HETATM 33 H H61 LDA . . . E 5 -23.768 110.758 -19.167 1 81.29 ? H61 LDA 1004 A 1 
HETATM 34 H H62 LDA . . . E 5 -24.664 112.257 -19.397 1 81.29 ? H62 LDA 1004 A 1 
HETATM 35 H H71 LDA . . . E 5 -26.178 109.652 -19.222 1 102.55 ? H71 LDA 1004 A 1 
HETATM 36 H H72 LDA . . . E 5 -25.343 110.061 -20.718 1 102.55 ? H72 LDA 1004 A 1 
HETATM 37 H H81 LDA . . . E 5 -27.235 112.013 -19.367 1 120.23 ? H81 LDA 1004 A 1 
HETATM 38 H H82 LDA . . . E 5 -26.636 112.051 -21.025 1 120.23 ? H82 LDA 1004 A 1 
HETATM 39 H H91 LDA . . . E 5 -27.868 109.53 -20.771 1 116.34 ? H91 LDA 1004 A 1 
HETATM 40 H H92 LDA . . . E 5 -28.936 110.629 -19.908 1 116.34 ? H92 LDA 1004 A 1 
HETATM 41 H H101 LDA . . . E 5 -28.491 112.11 -22.145 1 124.68 ? H101 LDA 1004 A 1 
HETATM 42 H H102 LDA . . . E 5 -29.824 110.969 -21.979 1 124.68 ? H102 LDA 1004 A 1 
HETATM 43 H H111 LDA . . . E 5 -27.109 110.111 -23.032 1 138.03 ? H111 LDA 1004 A 1 
HETATM 44 H H112 LDA . . . E 5 -28.641 109.252 -23.159 1 138.03 ? H112 LDA 1004 A 1 
HETATM 45 H H121 LDA . . . E 5 -28.988 111.848 -24.343 1 127.19 ? H121 LDA 1004 A 1 
HETATM 46 H H122 LDA . . . E 5 -29.051 110.253 -25.13 1 127.19 ? H122 LDA 1004 A 1 
HETATM 47 H H123 LDA . . . E 5 -27.502 111.122 -25.002 1 127.19 ? H123 LDA 1004 A 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           47 
#