data_5FIB # _model_server_result.job_id OSiPqXzgsaJwRbi88lv9xg _model_server_result.datetime_utc '2025-01-02 17:12:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fib # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":704}' # _entry.id 5FIB # _exptl.entry_id 5FIB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 10 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5FIB _cell.length_a 181.173 _cell.length_b 181.173 _cell.length_c 109.891 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FIB _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 4 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,K,L,M,N,O,P,Q,R,S,T,U,V,W,IA 1 1 B,H,I,J,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,JA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 10 _struct_asym.id AA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide 5 oligosaccharide 6 oligosaccharide 7 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 1 FUC NAG C1 O1 . O6 HO6 . sing 3 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 4 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 5 ? 3 4 3 MAN BMA C1 O1 . O3 HO3 . sing 6 ? 3 5 3 MAN BMA C1 O1 . O6 HO6 . sing 7 ? 3 6 1 FUC NAG C1 O1 . O6 HO6 . sing 8 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 9 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing 10 ? 5 3 2 BMA NAG C1 O1 . O4 HO4 . sing 11 ? 5 4 1 FUC NAG C1 O1 . O6 HO6 . sing 12 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 13 ? 6 3 2 BMA NAG C1 O1 . O4 HO4 . sing 14 ? 6 4 3 MAN BMA C1 O1 . O3 HO3 . sing 15 ? 6 5 3 MAN BMA C1 O1 . O6 HO6 . sing 16 ? 7 2 1 NAG NAG C1 O1 . O4 HO4 . sing 17 ? 7 3 2 BMA NAG C1 O1 . O4 HO4 . sing 18 ? 7 4 3 MAN BMA C1 O1 . O3 HO3 . sing 19 ? 7 5 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG D 1 NAG 2 n C NAG 2 C 2 NAG D 15 NAG 2 n C FUC 3 C 3 FUC E 6 FUC 2 n D NAG 1 D 1 NAG D 3 NAG 2 n D NAG 2 D 2 NAG D 6 NAG 2 n D FUC 3 D 3 FUC E 4 FUC 3 n E NAG 1 E 1 NAG D 4 NAG 3 n E NAG 2 E 2 NAG D 5 NAG 3 n E BMA 3 E 3 BMA F 1 BMA 3 n E MAN 4 E 4 MAN G 1 MAN 3 n E MAN 5 E 5 MAN G 2 MAN 3 n E FUC 6 E 6 FUC E 1 FUC 4 n F NAG 1 F 1 NAG D 9 NAG 4 n F NAG 2 F 2 NAG D 13 NAG 5 n G NAG 1 G 1 NAG D 16 NAG 5 n G NAG 2 G 2 NAG D 17 NAG 5 n G BMA 3 G 3 BMA F 5 BMA 5 n G FUC 4 G 4 FUC E 5 FUC 3 n H NAG 1 H 1 NAG D 7 NAG 3 n H NAG 2 H 2 NAG D 8 NAG 3 n H BMA 3 H 3 BMA F 2 BMA 3 n H MAN 4 H 4 MAN G 3 MAN 3 n H MAN 5 H 5 MAN G 4 MAN 3 n H FUC 6 H 6 FUC E 2 FUC 6 n I NAG 1 I 1 NAG D 10 NAG 6 n I NAG 2 I 2 NAG D 14 NAG 6 n I BMA 3 I 3 BMA F 3 BMA 6 n I MAN 4 I 4 MAN G 6 MAN 6 n I MAN 5 I 5 MAN G 5 MAN 7 n J NAG 1 J 1 NAG D 11 NAG 7 n J NAG 2 J 2 NAG D 12 NAG 7 n J BMA 3 J 3 BMA F 4 BMA 7 n J MAN 4 J 4 MAN G 7 MAN 7 n J FUC 5 J 5 FUC E 3 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 87 1_555 A SG CYS 90 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 17 A CYS 90 1_555 A SG CYS 82 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 45 A CYS 118 1_555 A SG CYS 56 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 146 A CYS 219 1_555 A SG CYS 151 A CYS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 A SG CYS 152 A CYS 225 1_555 A SG CYS 175 A CYS 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 A SG CYS 310 A CYS 383 1_555 A SG CYS 356 A CYS 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 A SG CYS 509 A CYS 582 1_555 A SG CYS 513 A CYS 586 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf8 A SG CYS 519 A CYS 592 1_555 A SG CYS 532 A CYS 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 B SG CYS 14 B CYS 87 1_555 B SG CYS 90 B CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 B SG CYS 17 B CYS 90 1_555 B SG CYS 82 B CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf11 B SG CYS 45 B CYS 118 1_555 B SG CYS 56 B CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf12 B SG CYS 146 B CYS 219 1_555 B SG CYS 151 B CYS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf13 B SG CYS 152 B CYS 225 1_555 B SG CYS 175 B CYS 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf14 B SG CYS 310 B CYS 383 1_555 B SG CYS 356 B CYS 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf15 B SG CYS 509 B CYS 582 1_555 B SG CYS 513 B CYS 586 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf16 B SG CYS 519 B CYS 592 1_555 B SG CYS 532 B CYS 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A ND2 ASN 11 A ASN 84 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale2 A ND2 ASN 100 A ASN 173 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.416 ? covale ? covale3 A ND2 ASN 260 A ASN 333 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale4 A ND2 ASN 320 A ASN 393 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale5 A ND2 ASN 445 A ASN 518 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale6 B ND2 ASN 11 B ASN 84 1_555 J C1 NAG . J NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale7 B ND2 ASN 100 B ASN 173 1_555 AA C1 NAG . B NAG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale8 B ND2 ASN 320 B ASN 393 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale9 B ND2 ASN 445 B ASN 518 1_555 I C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale10 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale11 C O6 NAG . C NAG 1 1_555 C C1 FUC . C FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale12 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 ? covale ? covale13 D O6 NAG . D NAG 1 1_555 D C1 FUC . D FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.468 ? covale ? covale14 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 ? covale ? covale15 E O6 NAG . E NAG 1 1_555 E C1 FUC . E FUC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale16 E O4 NAG . E NAG 2 1_555 E C1 BMA . E BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale17 E O3 BMA . E BMA 3 1_555 E C1 MAN . E MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale18 E O6 BMA . E BMA 3 1_555 E C1 MAN . E MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale19 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale20 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale21 G O6 NAG . G NAG 1 1_555 G C1 FUC . G FUC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale22 G O4 NAG . G NAG 2 1_555 G C1 BMA . G BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale23 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale24 H O6 NAG . H NAG 1 1_555 H C1 FUC . H FUC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale25 H O4 NAG . H NAG 2 1_555 H C1 BMA . H BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale26 H O3 BMA . H BMA 3 1_555 H C1 MAN . H MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale27 H O6 BMA . H BMA 3 1_555 H C1 MAN . H MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale28 I O4 NAG . I NAG 1 1_555 I C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale29 I O4 NAG . I NAG 2 1_555 I C1 BMA . I BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale30 I O3 BMA . I BMA 3 1_555 I C1 MAN . I MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale31 I O6 BMA . I BMA 3 1_555 I C1 MAN . I MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale32 J O4 NAG . J NAG 1 1_555 J C1 NAG . J NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? covale ? covale33 J O6 NAG . J NAG 1 1_555 J C1 FUC . J FUC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale34 J O4 NAG . J NAG 2 1_555 J C1 BMA . J BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? covale ? covale35 J O3 BMA . J BMA 3 1_555 J C1 MAN . J MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.462 ? metalc ? metalc1 A NE2 HIS 5 A HIS 78 1_555 M ZN ZN . A ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc2 A NE2 HIS 7 A HIS 80 1_555 M ZN ZN . A ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc3 A OD1 ASP 131 A ASP 204 1_555 K ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc4 A NE2 HIS 133 A HIS 206 1_555 K ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc5 A OD1 ASP 203 A ASP 276 1_555 K ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc6 A OD1 ASP 203 A ASP 276 1_555 L ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc7 A OD1 ASN 243 A ASN 316 1_555 L ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc8 A NE2 HIS 350 A HIS 423 1_555 L ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc9 A ND1 HIS 382 A HIS 455 1_555 L ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc10 A NE2 HIS 384 A HIS 457 1_555 K ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc11 A NE2 HIS 500 A HIS 573 1_555 Z ZN ZN . B ZN 703 7_553 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc12 K ZN ZN . A ZN 701 1_555 IA O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc13 L ZN ZN . A ZN 702 1_555 IA O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc14 M ZN ZN . A ZN 703 7_553 B NE2 HIS 500 B HIS 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc15 B NE2 HIS 5 B HIS 78 1_555 Z ZN ZN . B ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc16 B NE2 HIS 7 B HIS 80 1_555 Z ZN ZN . B ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc17 B OD1 ASP 131 B ASP 204 1_555 X ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc18 B NE2 HIS 133 B HIS 206 1_555 X ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc19 B OD1 ASP 203 B ASP 276 1_555 X ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc20 B OD1 ASP 203 B ASP 276 1_555 Y ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc21 B OD1 ASN 243 B ASN 316 1_555 Y ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc22 B NE2 HIS 350 B HIS 423 1_555 Y ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc23 B ND1 HIS 382 B HIS 455 1_555 Y ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc24 B NE2 HIS 384 B HIS 457 1_555 X ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc25 X ZN ZN . B ZN 701 1_555 JA O HOH . B HOH 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc26 Y ZN ZN . B ZN 702 1_555 JA O HOH . B HOH 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 308 n n C1 O1 NAG sing 309 n n C1 O5 NAG sing 310 n n C1 H1 NAG sing 311 n n C2 C3 NAG sing 312 n n C2 N2 NAG sing 313 n n C2 H2 NAG sing 314 n n C3 C4 NAG sing 315 n n C3 O3 NAG sing 316 n n C3 H3 NAG sing 317 n n C4 C5 NAG sing 318 n n C4 O4 NAG sing 319 n n C4 H4 NAG sing 320 n n C5 C6 NAG sing 321 n n C5 O5 NAG sing 322 n n C5 H5 NAG sing 323 n n C6 O6 NAG sing 324 n n C6 H61 NAG sing 325 n n C6 H62 NAG sing 326 n n C7 C8 NAG sing 327 n n C7 N2 NAG sing 328 n n C7 O7 NAG doub 329 n n C8 H81 NAG sing 330 n n C8 H82 NAG sing 331 n n C8 H83 NAG sing 332 n n N2 HN2 NAG sing 333 n n O1 HO1 NAG sing 334 n n O3 HO3 NAG sing 335 n n O4 HO4 NAG sing 336 n n O6 HO6 NAG sing 337 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 5FIB _atom_sites.fract_transf_matrix[1][1] 0.00552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00552 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0091 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 8 ZN A 1 701 1 ZN ZN . L 8 ZN A 1 702 2 ZN ZN . M 8 ZN A 1 703 5 ZN ZN . N 9 SO4 A 1 722 1 SO4 SO4 . O 9 SO4 A 1 723 3 SO4 SO4 . P 9 SO4 A 1 724 5 SO4 SO4 . Q 9 SO4 A 1 725 6 SO4 SO4 . R 9 SO4 A 1 726 8 SO4 SO4 . S 9 SO4 A 1 727 9 SO4 SO4 . T 9 SO4 A 1 728 12 SO4 SO4 . U 9 SO4 A 1 729 13 SO4 SO4 . V 9 SO4 A 1 730 15 SO4 SO4 . W 9 SO4 A 1 731 17 SO4 SO4 . X 8 ZN B 1 701 3 ZN ZN . Y 8 ZN B 1 702 4 ZN ZN . Z 8 ZN B 1 703 6 ZN ZN . AA 10 NAG B 1 704 2 NAG NAG . BA 9 SO4 B 1 721 2 SO4 SO4 . CA 9 SO4 B 1 722 4 SO4 SO4 . DA 9 SO4 B 1 723 7 SO4 SO4 . EA 9 SO4 B 1 724 10 SO4 SO4 . FA 9 SO4 B 1 725 11 SO4 SO4 . GA 9 SO4 B 1 726 14 SO4 SO4 . HA 9 SO4 B 1 727 16 SO4 SO4 . IA 11 HOH A 1 801 9 HOH HOH . IA 11 HOH A 2 802 29 HOH HOH . IA 11 HOH A 3 803 3 HOH HOH . IA 11 HOH A 4 804 1 HOH HOH . IA 11 HOH A 5 805 24 HOH HOH . IA 11 HOH A 6 806 18 HOH HOH . IA 11 HOH A 7 807 15 HOH HOH . IA 11 HOH A 8 808 12 HOH HOH . IA 11 HOH A 9 809 14 HOH HOH . IA 11 HOH A 10 810 21 HOH HOH . IA 11 HOH A 11 811 23 HOH HOH . IA 11 HOH A 12 812 26 HOH HOH . IA 11 HOH A 13 813 27 HOH HOH . IA 11 HOH A 14 814 16 HOH HOH . JA 11 HOH B 1 801 19 HOH HOH . JA 11 HOH B 2 802 13 HOH HOH . JA 11 HOH B 3 803 10 HOH HOH . JA 11 HOH B 4 804 7 HOH HOH . JA 11 HOH B 5 805 20 HOH HOH . JA 11 HOH B 6 806 30 HOH HOH . JA 11 HOH B 7 807 11 HOH HOH . JA 11 HOH B 8 808 4 HOH HOH . JA 11 HOH B 9 809 22 HOH HOH . JA 11 HOH B 10 810 6 HOH HOH . JA 11 HOH B 11 811 25 HOH HOH . JA 11 HOH B 12 812 2 HOH HOH . JA 11 HOH B 13 813 28 HOH HOH . JA 11 HOH B 14 814 5 HOH HOH . JA 11 HOH B 15 815 8 HOH HOH . JA 11 HOH B 16 816 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . AA 10 205.406 229.3 -106.859 1 102.24 ? C1 NAG 704 B 1 HETATM 2 C C2 NAG . . . AA 10 206.109 227.958 -107.054 1 112.94 ? C2 NAG 704 B 1 HETATM 3 C C3 NAG . . . AA 10 206.985 227.998 -108.303 1 110 ? C3 NAG 704 B 1 HETATM 4 C C4 NAG . . . AA 10 206.166 228.432 -109.511 1 107.97 ? C4 NAG 704 B 1 HETATM 5 C C5 NAG . . . AA 10 205.451 229.749 -109.221 1 92.67 ? C5 NAG 704 B 1 HETATM 6 C C6 NAG . . . AA 10 204.514 230.166 -110.331 1 87.48 ? C6 NAG 704 B 1 HETATM 7 C C7 NAG . . . AA 10 206.722 226.484 -105.185 1 89.68 ? C7 NAG 704 B 1 HETATM 8 C C8 NAG . . . AA 10 207.632 226.29 -104.01 1 73.5 ? C8 NAG 704 B 1 HETATM 9 N N2 NAG . . . AA 10 206.902 227.609 -105.886 1 109.01 ? N2 NAG 704 B 1 HETATM 10 O O3 NAG . . . AA 10 207.541 226.708 -108.532 1 100.37 ? O3 NAG 704 B 1 HETATM 11 O O4 NAG . . . AA 10 207.019 228.601 -110.638 1 103.28 ? O4 NAG 704 B 1 HETATM 12 O O5 NAG . . . AA 10 204.654 229.624 -108.034 1 96.98 ? O5 NAG 704 B 1 HETATM 13 O O6 NAG . . . AA 10 204.095 231.515 -110.177 1 72.16 ? O6 NAG 704 B 1 HETATM 14 O O7 NAG . . . AA 10 205.862 225.661 -105.485 1 67.72 ? O7 NAG 704 B 1 HETATM 15 H H1 NAG . . . AA 10 206.075 229.994 -106.703 1 122.69 ? H1 NAG 704 B 1 HETATM 16 H H2 NAG . . . AA 10 205.428 227.271 -107.184 1 135.53 ? H2 NAG 704 B 1 HETATM 17 H H3 NAG . . . AA 10 207.709 228.637 -108.163 1 132 ? H3 NAG 704 B 1 HETATM 18 H H4 NAG . . . AA 10 205.503 227.745 -109.712 1 129.56 ? H4 NAG 704 B 1 HETATM 19 H H5 NAG . . . AA 10 206.117 230.449 -109.086 1 111.21 ? H5 NAG 704 B 1 HETATM 20 H H61 NAG . . . AA 10 203.729 229.586 -110.322 1 104.97 ? H61 NAG 704 B 1 HETATM 21 H H62 NAG . . . AA 10 204.972 230.07 -111.188 1 104.97 ? H62 NAG 704 B 1 HETATM 22 H H81 NAG . . . AA 10 207.511 227.025 -103.379 1 88.2 ? H81 NAG 704 B 1 HETATM 23 H H82 NAG . . . AA 10 208.559 226.273 -104.315 1 88.2 ? H82 NAG 704 B 1 HETATM 24 H H83 NAG . . . AA 10 207.419 225.445 -103.57 1 88.2 ? H83 NAG 704 B 1 HETATM 25 H HN2 NAG . . . AA 10 207.556 228.186 -105.619 1 130.81 ? HN2 NAG 704 B 1 HETATM 26 H HO3 NAG . . . AA 10 208.132 226.754 -109.193 1 120.44 ? HO3 NAG 704 B 1 HETATM 27 H HO4 NAG . . . AA 10 207.09 229.465 -110.829 1 123.94 ? HO4 NAG 704 B 1 HETATM 28 H HO6 NAG . . . AA 10 203.616 231.759 -110.884 1 86.59 ? HO6 NAG 704 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 28 #