data_5FKL
#
_model_server_result.job_id            jfx5kqjeVPxSC-dt8yA7DA 
_model_server_result.datetime_utc      '2024-11-28 07:23:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fkl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":222}' 
#
_entry.id    5FKL 
#
_exptl.entry_id    5FKL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              426.419 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5A,6-ANHYDROTETRACYCLINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5FKL 
_cell.length_a            66.557 
_cell.length_b            66.557 
_cell.length_c            179.681 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FKL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 41 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 66.557 66.557 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O12 TDC . A TDC 222 1_555 C MG MG . A MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc2 B O11 TDC . A TDC 222 1_555 C MG MG . A MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc3 C MG MG . A MG 223 1_555 H O HOH . A HOH 2032 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc4 C MG MG . A MG 223 1_555 H O HOH . A HOH 2033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? 
metalc ? metalc5 C MG MG . A MG 223 1_555 H O HOH . A HOH 2064 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
#
_chem_comp.formula           'C22 H22 N2 O7' 
_chem_comp.formula_weight    426.419 
_chem_comp.id                TDC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5A,6-ANHYDROTETRACYCLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O12 C12 TDC doub 281 n n 
C12 C1B TDC sing 282 n n 
C12 C1C TDC sing 283 n n 
C1B C11 TDC sing 284 n y 
C1B C51 TDC doub 285 n y 
C11 O11 TDC sing 286 n n 
C11 C1A TDC doub 287 n y 
C1A C10 TDC sing 288 n y 
C1A C61 TDC sing 289 n y 
C10 O10 TDC sing 290 n n 
C10 C9 TDC doub 291 n y 
C9 C8 TDC sing 292 n y 
C8 C7 TDC doub 293 n y 
C7 C61 TDC sing 294 n y 
C61 C6 TDC doub 295 n y 
C6 C62 TDC sing 296 n n 
C6 C51 TDC sing 297 n y 
C51 C5 TDC sing 298 n n 
C5 C41 TDC sing 299 n n 
C1C C1 TDC sing 300 n n 
C1C O1C TDC sing 301 n n 
C1C C41 TDC sing 302 n n 
C1 O1 TDC doub 303 n n 
C1 C2 TDC sing 304 n n 
C41 C4 TDC sing 305 n n 
C4 N4 TDC sing 306 n n 
C4 C3 TDC sing 307 n n 
N4 C43 TDC sing 308 n n 
N4 C42 TDC sing 309 n n 
C3 O3 TDC sing 310 n n 
C3 C2 TDC doub 311 n n 
C2 C21 TDC sing 312 n n 
C21 O21 TDC doub 313 n n 
C21 N21 TDC sing 314 n n 
O11 H11 TDC sing 315 n n 
O10 H10 TDC sing 316 n n 
C9 H9 TDC sing 317 n n 
C8 H8 TDC sing 318 n n 
C7 H7 TDC sing 319 n n 
C62 H621 TDC sing 320 n n 
C62 H622 TDC sing 321 n n 
C62 H623 TDC sing 322 n n 
C5 H5C1 TDC sing 323 n n 
C5 H5C2 TDC sing 324 n n 
C41 H41 TDC sing 325 n n 
O1C H1C TDC sing 326 n n 
C4 H4 TDC sing 327 n n 
C43 H431 TDC sing 328 n n 
C43 H432 TDC sing 329 n n 
C43 H433 TDC sing 330 n n 
C42 H421 TDC sing 331 n n 
C42 H422 TDC sing 332 n n 
C42 H423 TDC sing 333 n n 
O3 H3 TDC sing 334 n n 
N21 H211 TDC sing 335 n n 
N21 H212 TDC sing 336 n n 
#
_atom_sites.entry_id                     5FKL 
_atom_sites.fract_transf_matrix[1][1]    0.015025 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015025 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005565 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TDC A 1 222 222 TDC TDC . 
C 3 MG A 1 223 223 MG MG . 
D 4 SO4 A 1 301 301 SO4 SO4 . 
E 5 CL A 1 302 302 CL CL . 
F 5 CL A 1 303 303 CL CL . 
G 5 CL A 1 304 304 CL CL . 
H 6 HOH A 1 2001 2001 HOH HOH . 
H 6 HOH A 2 2002 2002 HOH HOH . 
H 6 HOH A 3 2003 2003 HOH HOH . 
H 6 HOH A 4 2004 2004 HOH HOH . 
H 6 HOH A 5 2005 2005 HOH HOH . 
H 6 HOH A 6 2006 2006 HOH HOH . 
H 6 HOH A 7 2007 2007 HOH HOH . 
H 6 HOH A 8 2008 2008 HOH HOH . 
H 6 HOH A 9 2009 2009 HOH HOH . 
H 6 HOH A 10 2010 2010 HOH HOH . 
H 6 HOH A 11 2011 2011 HOH HOH . 
H 6 HOH A 12 2012 2012 HOH HOH . 
H 6 HOH A 13 2013 2013 HOH HOH . 
H 6 HOH A 14 2014 2014 HOH HOH . 
H 6 HOH A 15 2015 2015 HOH HOH . 
H 6 HOH A 16 2016 2016 HOH HOH . 
H 6 HOH A 17 2017 2017 HOH HOH . 
H 6 HOH A 18 2018 2018 HOH HOH . 
H 6 HOH A 19 2019 2019 HOH HOH . 
H 6 HOH A 20 2020 2020 HOH HOH . 
H 6 HOH A 21 2021 2021 HOH HOH . 
H 6 HOH A 22 2022 2022 HOH HOH . 
H 6 HOH A 23 2023 2023 HOH HOH . 
H 6 HOH A 24 2024 2024 HOH HOH . 
H 6 HOH A 25 2025 2025 HOH HOH . 
H 6 HOH A 26 2026 2026 HOH HOH . 
H 6 HOH A 27 2027 2027 HOH HOH . 
H 6 HOH A 28 2028 2028 HOH HOH . 
H 6 HOH A 29 2029 2029 HOH HOH . 
H 6 HOH A 30 2030 2030 HOH HOH . 
H 6 HOH A 31 2031 2031 HOH HOH . 
H 6 HOH A 32 2032 2032 HOH HOH . 
H 6 HOH A 33 2033 2033 HOH HOH . 
H 6 HOH A 34 2034 2034 HOH HOH . 
H 6 HOH A 35 2035 2035 HOH HOH . 
H 6 HOH A 36 2036 2036 HOH HOH . 
H 6 HOH A 37 2037 2037 HOH HOH . 
H 6 HOH A 38 2038 2038 HOH HOH . 
H 6 HOH A 39 2039 2039 HOH HOH . 
H 6 HOH A 40 2040 2040 HOH HOH . 
H 6 HOH A 41 2041 2041 HOH HOH . 
H 6 HOH A 42 2042 2042 HOH HOH . 
H 6 HOH A 43 2043 2043 HOH HOH . 
H 6 HOH A 44 2044 2044 HOH HOH . 
H 6 HOH A 45 2045 2045 HOH HOH . 
H 6 HOH A 46 2046 2046 HOH HOH . 
H 6 HOH A 47 2047 2047 HOH HOH . 
H 6 HOH A 48 2048 2048 HOH HOH . 
H 6 HOH A 49 2049 2049 HOH HOH . 
H 6 HOH A 50 2050 2050 HOH HOH . 
H 6 HOH A 51 2051 2051 HOH HOH . 
H 6 HOH A 52 2052 2052 HOH HOH . 
H 6 HOH A 53 2053 2053 HOH HOH . 
H 6 HOH A 54 2054 2054 HOH HOH . 
H 6 HOH A 55 2055 2055 HOH HOH . 
H 6 HOH A 56 2056 2056 HOH HOH . 
H 6 HOH A 57 2057 2057 HOH HOH . 
H 6 HOH A 58 2058 2058 HOH HOH . 
H 6 HOH A 59 2059 2059 HOH HOH . 
H 6 HOH A 60 2060 2060 HOH HOH . 
H 6 HOH A 61 2061 2061 HOH HOH . 
H 6 HOH A 62 2062 2062 HOH HOH . 
H 6 HOH A 63 2063 2063 HOH HOH . 
H 6 HOH A 64 2064 2064 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 TDC . . . B 2 21.289 34.565 32.372 1 41.06 ? O12 TDC 222 A 1 
HETATM 2 C C12 TDC . . . B 2 20.707 34.557 33.44 1 37.84 ? C12 TDC 222 A 1 
HETATM 3 C C1B TDC . . . B 2 20.284 35.836 34.061 1 38.21 ? C1B TDC 222 A 1 
HETATM 4 C C11 TDC . . . B 2 20.517 37.095 33.338 1 38.49 ? C11 TDC 222 A 1 
HETATM 5 O O11 TDC . . . B 2 21.154 37.129 32.145 1 39.49 ? O11 TDC 222 A 1 
HETATM 6 C C1A TDC . . . B 2 20.053 38.348 33.928 1 39.78 ? C1A TDC 222 A 1 
HETATM 7 C C10 TDC . . . B 2 20.291 39.611 33.208 1 41.02 ? C10 TDC 222 A 1 
HETATM 8 O O10 TDC . . . B 2 20.924 39.59 32.01 1 41.24 ? O10 TDC 222 A 1 
HETATM 9 C C9 TDC . . . B 2 19.842 40.784 33.776 1 43.52 ? C9 TDC 222 A 1 
HETATM 10 C C8 TDC . . . B 2 19.184 40.783 35.001 1 43.18 ? C8 TDC 222 A 1 
HETATM 11 C C7 TDC . . . B 2 18.944 39.61 35.719 1 41.82 ? C7 TDC 222 A 1 
HETATM 12 C C61 TDC . . . B 2 19.353 38.381 35.224 1 39.88 ? C61 TDC 222 A 1 
HETATM 13 C C6 TDC . . . B 2 19.107 37.122 35.958 1 37.29 ? C6 TDC 222 A 1 
HETATM 14 C C62 TDC . . . B 2 18.394 37.205 37.277 1 38.02 ? C62 TDC 222 A 1 
HETATM 15 C C51 TDC . . . B 2 19.59 35.837 35.37 1 36.99 ? C51 TDC 222 A 1 
HETATM 16 C C5 TDC . . . B 2 19.377 34.524 36.073 1 35.65 ? C5 TDC 222 A 1 
HETATM 17 C C1C TDC . . . B 2 20.317 33.271 34.097 1 37.26 ? C1C TDC 222 A 1 
HETATM 18 C C1 TDC . . . B 2 18.922 32.798 33.729 1 36.72 ? C1 TDC 222 A 1 
HETATM 19 O O1 TDC . . . B 2 18.23 33.335 32.86 1 37.51 ? O1 TDC 222 A 1 
HETATM 20 O O1C TDC . . . B 2 21.215 32.269 33.637 1 38.17 ? O1C TDC 222 A 1 
HETATM 21 C C41 TDC . . . B 2 20.356 33.431 35.622 1 36.64 ? C41 TDC 222 A 1 
HETATM 22 C C4 TDC . . . B 2 19.988 32.142 36.399 1 35.84 ? C4 TDC 222 A 1 
HETATM 23 N N4 TDC . . . B 2 21.148 31.355 36.944 1 37.92 ? N4 TDC 222 A 1 
HETATM 24 C C43 TDC . . . B 2 21.849 32.075 38.033 1 38.7 ? C43 TDC 222 A 1 
HETATM 25 C C42 TDC . . . B 2 22.137 30.86 35.956 1 36.37 ? C42 TDC 222 A 1 
HETATM 26 C C3 TDC . . . B 2 19.13 31.231 35.552 1 36.07 ? C3 TDC 222 A 1 
HETATM 27 O O3 TDC . . . B 2 19.088 29.969 35.928 1 34.64 ? O3 TDC 222 A 1 
HETATM 28 C C2 TDC . . . B 2 18.438 31.637 34.467 1 36.26 ? C2 TDC 222 A 1 
HETATM 29 C C21 TDC . . . B 2 17.215 30.911 34.016 1 38.7 ? C21 TDC 222 A 1 
HETATM 30 O O21 TDC . . . B 2 16.792 29.975 34.663 1 36.45 ? O21 TDC 222 A 1 
HETATM 31 N N21 TDC . . . B 2 16.554 31.272 32.911 1 39.42 ? N21 TDC 222 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#