data_5FL7
#
_model_server_result.job_id            COOrX4NhRvhjh3xHUZJQAA 
_model_server_result.datetime_utc      '2024-12-26 18:40:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5fl7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":600}' 
#
_entry.id    5FL7 
#
_exptl.entry_id    5FL7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5FL7 
_cell.length_a            169.5 
_cell.length_b            182.2 
_cell.length_c            193 
_cell.Z_PDB               40 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FL7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    nonadecameric 
_pdbx_struct_assembly.oligomeric_count      19 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 T N N 
? 7 V N N 
? 7 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 202 A THR 202 1_555 U MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc2 T O1G ATP . A ATP 600 1_555 U MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
metalc ? metalc3 T O2B ATP . A ATP 600 1_555 U MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc4 U MG MG . A MG 601 1_555 DA O HOH . A HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc5 U MG MG . A MG 601 1_555 DA O HOH . A HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc6 U MG MG . A MG 601 1_555 DA O HOH . A HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc7 B OG1 THR 202 B THR 202 1_555 W MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
metalc ? metalc8 V O2G ATP . B ATP 600 1_555 W MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc9 V O2B ATP . B ATP 600 1_555 W MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc10 W MG MG . B MG 601 1_555 EA O HOH . B HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc11 W MG MG . B MG 601 1_555 EA O HOH . B HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc12 W MG MG . B MG 601 1_555 EA O HOH . B HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc13 C OG1 THR 202 C THR 202 1_555 Y MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
metalc ? metalc14 X O1G ATP . C ATP 600 1_555 Y MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc15 X O2B ATP . C ATP 600 1_555 Y MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
metalc ? metalc16 Y MG MG . C MG 601 1_555 FA O HOH . C HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc17 Y MG MG . C MG 601 1_555 FA O HOH . C HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc18 Y MG MG . C MG 601 1_555 FA O HOH . C HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc19 D OG1 THR 195 D THR 195 1_555 AA MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc20 Z O1B ADP . D ADP 600 1_555 AA MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
metalc ? metalc21 AA MG MG . D MG 601 1_555 GA O HOH . D HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc22 AA MG MG . D MG 601 1_555 GA O HOH . D HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? 
metalc ? metalc23 AA MG MG . D MG 601 1_555 GA O HOH . D HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
metalc ? metalc24 AA MG MG . D MG 601 1_555 GA O HOH . D HOH 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
metalc ? metalc25 F OG1 THR 195 F THR 195 1_555 CA MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc26 BA O2B ADP . F ADP 600 1_555 CA MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc27 CA MG MG . F MG 601 1_555 HA O HOH . F HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc28 CA MG MG . F MG 601 1_555 HA O HOH . F HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc29 CA MG MG . F MG 601 1_555 HA O HOH . F HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
metalc ? metalc30 CA MG MG . F MG 601 1_555 HA O HOH . F HOH 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 114 n n 
PG O2G ATP sing 115 n n 
PG O3G ATP sing 116 n n 
PG O3B ATP sing 117 n n 
O2G HOG2 ATP sing 118 n n 
O3G HOG3 ATP sing 119 n n 
PB O1B ATP doub 120 n n 
PB O2B ATP sing 121 n n 
PB O3B ATP sing 122 n n 
PB O3A ATP sing 123 n n 
O2B HOB2 ATP sing 124 n n 
PA O1A ATP doub 125 n n 
PA O2A ATP sing 126 n n 
PA O3A ATP sing 127 n n 
PA O5' ATP sing 128 n n 
O2A HOA2 ATP sing 129 n n 
O5' C5' ATP sing 130 n n 
C5' C4' ATP sing 131 n n 
C5' "H5'1" ATP sing 132 n n 
C5' "H5'2" ATP sing 133 n n 
C4' O4' ATP sing 134 n n 
C4' C3' ATP sing 135 n n 
C4' H4' ATP sing 136 n n 
O4' C1' ATP sing 137 n n 
C3' O3' ATP sing 138 n n 
C3' C2' ATP sing 139 n n 
C3' H3' ATP sing 140 n n 
O3' HO3' ATP sing 141 n n 
C2' O2' ATP sing 142 n n 
C2' C1' ATP sing 143 n n 
C2' H2' ATP sing 144 n n 
O2' HO2' ATP sing 145 n n 
C1' N9 ATP sing 146 n n 
C1' H1' ATP sing 147 n n 
N9 C8 ATP sing 148 n y 
N9 C4 ATP sing 149 n y 
C8 N7 ATP doub 150 n y 
C8 H8 ATP sing 151 n n 
N7 C5 ATP sing 152 n y 
C5 C6 ATP sing 153 n y 
C5 C4 ATP doub 154 n y 
C6 N6 ATP sing 155 n n 
C6 N1 ATP doub 156 n y 
N6 HN61 ATP sing 157 n n 
N6 HN62 ATP sing 158 n n 
N1 C2 ATP sing 159 n y 
C2 N3 ATP doub 160 n y 
C2 H2 ATP sing 161 n n 
N3 C4 ATP sing 162 n y 
#
_atom_sites.entry_id                     5FL7 
_atom_sites.fract_transf_matrix[1][1]    0.0059 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005488 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005181 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
T 7 ATP A 1 600 600 ATP ATP . 
U 8 MG A 1 601 601 MG MG . 
V 7 ATP B 1 600 600 ATP ATP . 
W 8 MG B 1 601 601 MG MG . 
X 7 ATP C 1 600 600 ATP ATP . 
Y 8 MG C 1 601 601 MG MG . 
Z 9 ADP D 1 600 600 ADP ADP . 
AA 8 MG D 1 601 601 MG MG . 
BA 9 ADP F 1 600 600 ADP ADP . 
CA 8 MG F 1 601 601 MG MG . 
DA 10 HOH A 1 2001 2001 HOH HOH . 
DA 10 HOH A 2 2002 2002 HOH HOH . 
DA 10 HOH A 3 2003 2003 HOH HOH . 
EA 10 HOH B 1 2001 2001 HOH HOH . 
EA 10 HOH B 2 2002 2002 HOH HOH . 
EA 10 HOH B 3 2003 2003 HOH HOH . 
FA 10 HOH C 1 2001 2001 HOH HOH . 
FA 10 HOH C 2 2002 2002 HOH HOH . 
FA 10 HOH C 3 2003 2003 HOH HOH . 
GA 10 HOH D 1 2001 2001 HOH HOH . 
GA 10 HOH D 2 2002 2002 HOH HOH . 
GA 10 HOH D 3 2003 2003 HOH HOH . 
GA 10 HOH D 4 2004 2004 HOH HOH . 
HA 10 HOH F 1 2001 2001 HOH HOH . 
HA 10 HOH F 2 2002 2002 HOH HOH . 
HA 10 HOH F 3 2003 2003 HOH HOH . 
HA 10 HOH F 4 2004 2004 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . X 7 -19.689 11.883 -62.576 1 174.09 ? PG ATP 600 C 1 
HETATM 2 O O1G ATP . . . X 7 -19.871 10.826 -63.639 1 164.42 ? O1G ATP 600 C 1 
HETATM 3 O O2G ATP . . . X 7 -20.475 13.15 -62.815 1 183.24 ? O2G ATP 600 C 1 
HETATM 4 O O3G ATP . . . X 7 -18.255 12.108 -62.161 1 160.09 ? O3G ATP 600 C 1 
HETATM 5 P PB ATP . . . X 7 -19.948 9.776 -60.758 1 149.83 ? PB ATP 600 C 1 
HETATM 6 O O1B ATP . . . X 7 -21.132 9.158 -60.053 1 154.9 ? O1B ATP 600 C 1 
HETATM 7 O O2B ATP . . . X 7 -19.291 9.048 -61.906 1 155.02 ? O2B ATP 600 C 1 
HETATM 8 O O3B ATP . . . X 7 -20.375 11.241 -61.269 1 156.27 ? O3B ATP 600 C 1 
HETATM 9 P PA ATP . . . X 7 -17.738 9.093 -59.288 1 156.07 ? PA ATP 600 C 1 
HETATM 10 O O1A ATP . . . X 7 -18.311 7.697 -59.319 1 151.63 ? O1A ATP 600 C 1 
HETATM 11 O O2A ATP . . . X 7 -16.486 9.393 -60.077 1 153.44 ? O2A ATP 600 C 1 
HETATM 12 O O3A ATP . . . X 7 -18.886 10.127 -59.744 1 155.5 ? O3A ATP 600 C 1 
HETATM 13 O O5' ATP . . . X 7 -17.467 9.496 -57.754 1 158.6 ? O5' ATP 600 C 1 
HETATM 14 C C5' ATP . . . X 7 -17.038 10.813 -57.412 1 166.18 ? C5' ATP 600 C 1 
HETATM 15 C C4' ATP . . . X 7 -15.959 10.692 -56.346 1 161.64 ? C4' ATP 600 C 1 
HETATM 16 O O4' ATP . . . X 7 -16.492 10.06 -55.182 1 160.61 ? O4' ATP 600 C 1 
HETATM 17 C C3' ATP . . . X 7 -14.813 9.828 -56.847 1 165.98 ? C3' ATP 600 C 1 
HETATM 18 O O3' ATP . . . X 7 -13.628 10.617 -56.987 1 177.08 ? O3' ATP 600 C 1 
HETATM 19 C C2' ATP . . . X 7 -14.604 8.753 -55.8 1 161.6 ? C2' ATP 600 C 1 
HETATM 20 O O2' ATP . . . X 7 -13.266 8.813 -55.298 1 162.66 ? O2' ATP 600 C 1 
HETATM 21 C C1' ATP . . . X 7 -15.599 9.058 -54.692 1 162.63 ? C1' ATP 600 C 1 
HETATM 22 N N9 ATP . . . X 7 -16.364 7.834 -54.348 1 169.74 ? N9 ATP 600 C 1 
HETATM 23 C C8 ATP . . . X 7 -17.287 7.243 -55.129 1 169.87 ? C8 ATP 600 C 1 
HETATM 24 N N7 ATP . . . X 7 -17.804 6.141 -54.528 1 159.6 ? N7 ATP 600 C 1 
HETATM 25 C C5 ATP . . . X 7 -17.202 6.015 -53.332 1 159.06 ? C5 ATP 600 C 1 
HETATM 26 C C6 ATP . . . X 7 -17.278 5.071 -52.192 1 157.01 ? C6 ATP 600 C 1 
HETATM 27 N N6 ATP . . . X 7 -18.125 4.014 -52.214 1 159.38 ? N6 ATP 600 C 1 
HETATM 28 N N1 ATP . . . X 7 -16.475 5.3 -51.131 1 155.92 ? N1 ATP 600 C 1 
HETATM 29 C C2 ATP . . . X 7 -15.628 6.347 -51.097 1 157.42 ? C2 ATP 600 C 1 
HETATM 30 N N3 ATP . . . X 7 -15.507 7.242 -52.093 1 155.34 ? N3 ATP 600 C 1 
HETATM 31 C C4 ATP . . . X 7 -16.252 7.132 -53.219 1 159.74 ? C4 ATP 600 C 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    56 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#