data_5FTK
#
_model_server_result.job_id            35qDFm3N5O8t87AidAi_Lg 
_model_server_result.datetime_utc      '2024-11-08 02:59:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ftk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":900}' 
#
_entry.id    5FTK 
#
_exptl.entry_id    5FTK 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5FTK 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5FTK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                ADP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B ADP doub 1 n n 
PB O2B ADP sing 2 n n 
PB O3B ADP sing 3 n n 
PB O3A ADP sing 4 n n 
O2B HOB2 ADP sing 5 n n 
O3B HOB3 ADP sing 6 n n 
PA O1A ADP doub 7 n n 
PA O2A ADP sing 8 n n 
PA O3A ADP sing 9 n n 
PA O5' ADP sing 10 n n 
O2A HOA2 ADP sing 11 n n 
O5' C5' ADP sing 12 n n 
C5' C4' ADP sing 13 n n 
C5' "H5'1" ADP sing 14 n n 
C5' "H5'2" ADP sing 15 n n 
C4' O4' ADP sing 16 n n 
C4' C3' ADP sing 17 n n 
C4' H4' ADP sing 18 n n 
O4' C1' ADP sing 19 n n 
C3' O3' ADP sing 20 n n 
C3' C2' ADP sing 21 n n 
C3' H3' ADP sing 22 n n 
O3' HO3' ADP sing 23 n n 
C2' O2' ADP sing 24 n n 
C2' C1' ADP sing 25 n n 
C2' H2' ADP sing 26 n n 
O2' HO2' ADP sing 27 n n 
C1' N9 ADP sing 28 n n 
C1' H1' ADP sing 29 n n 
N9 C8 ADP sing 30 n y 
N9 C4 ADP sing 31 n y 
C8 N7 ADP doub 32 n y 
C8 H8 ADP sing 33 n n 
N7 C5 ADP sing 34 n y 
C5 C6 ADP sing 35 n y 
C5 C4 ADP doub 36 n y 
C6 N6 ADP sing 37 n n 
C6 N1 ADP doub 38 n y 
N6 HN61 ADP sing 39 n n 
N6 HN62 ADP sing 40 n n 
N1 C2 ADP sing 41 n y 
C2 N3 ADP doub 42 n y 
C2 H2 ADP sing 43 n n 
N3 C4 ADP sing 44 n y 
#
_atom_sites.entry_id                     5FTK 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 ADP A 1 807 807 ADP ADP . 
H 2 ADP A 1 900 900 ADP ADP . 
I 2 ADP B 1 807 807 ADP ADP . 
J 2 ADP B 1 900 900 ADP ADP . 
K 2 ADP C 1 807 807 ADP ADP . 
L 2 ADP C 1 900 900 ADP ADP . 
M 2 ADP D 1 807 807 ADP ADP . 
N 2 ADP D 1 900 900 ADP ADP . 
O 2 ADP E 1 807 807 ADP ADP . 
P 2 ADP E 1 900 900 ADP ADP . 
Q 2 ADP F 1 807 807 ADP ADP . 
R 2 ADP F 1 900 900 ADP ADP . 
S 3 HOH A 1 1001 1001 HOH HOH . 
S 3 HOH A 2 1002 1002 HOH HOH . 
S 3 HOH A 3 1003 1003 HOH HOH . 
S 3 HOH A 4 1004 1004 HOH HOH . 
S 3 HOH A 5 1005 1005 HOH HOH . 
S 3 HOH A 6 1006 1006 HOH HOH . 
S 3 HOH A 7 1007 1007 HOH HOH . 
S 3 HOH A 8 1008 1008 HOH HOH . 
S 3 HOH A 9 1009 1009 HOH HOH . 
S 3 HOH A 10 1010 1010 HOH HOH . 
S 3 HOH A 11 1011 1011 HOH HOH . 
S 3 HOH A 12 1012 1012 HOH HOH . 
S 3 HOH A 13 1013 1013 HOH HOH . 
S 3 HOH A 14 1014 1014 HOH HOH . 
S 3 HOH A 15 1015 1015 HOH HOH . 
S 3 HOH A 16 1016 1016 HOH HOH . 
T 3 HOH B 1 1001 1001 HOH HOH . 
T 3 HOH B 2 1002 1002 HOH HOH . 
T 3 HOH B 3 1003 1003 HOH HOH . 
T 3 HOH B 4 1004 1004 HOH HOH . 
T 3 HOH B 5 1005 1005 HOH HOH . 
T 3 HOH B 6 1006 1006 HOH HOH . 
T 3 HOH B 7 1007 1007 HOH HOH . 
T 3 HOH B 8 1008 1008 HOH HOH . 
T 3 HOH B 9 1009 1009 HOH HOH . 
T 3 HOH B 10 1010 1010 HOH HOH . 
T 3 HOH B 11 1011 1011 HOH HOH . 
T 3 HOH B 12 1012 1012 HOH HOH . 
T 3 HOH B 13 1013 1013 HOH HOH . 
T 3 HOH B 14 1014 1014 HOH HOH . 
T 3 HOH B 15 1015 1015 HOH HOH . 
T 3 HOH B 16 1016 1016 HOH HOH . 
U 3 HOH C 1 1001 1001 HOH HOH . 
U 3 HOH C 2 1002 1002 HOH HOH . 
U 3 HOH C 3 1003 1003 HOH HOH . 
U 3 HOH C 4 1004 1004 HOH HOH . 
U 3 HOH C 5 1005 1005 HOH HOH . 
U 3 HOH C 6 1006 1006 HOH HOH . 
U 3 HOH C 7 1007 1007 HOH HOH . 
U 3 HOH C 8 1008 1008 HOH HOH . 
U 3 HOH C 9 1009 1009 HOH HOH . 
U 3 HOH C 10 1010 1010 HOH HOH . 
U 3 HOH C 11 1011 1011 HOH HOH . 
U 3 HOH C 12 1012 1012 HOH HOH . 
U 3 HOH C 13 1013 1013 HOH HOH . 
U 3 HOH C 14 1014 1014 HOH HOH . 
U 3 HOH C 15 1015 1015 HOH HOH . 
U 3 HOH C 16 1016 1016 HOH HOH . 
V 3 HOH D 1 1001 1001 HOH HOH . 
V 3 HOH D 2 1002 1002 HOH HOH . 
V 3 HOH D 3 1003 1003 HOH HOH . 
V 3 HOH D 4 1004 1004 HOH HOH . 
V 3 HOH D 5 1005 1005 HOH HOH . 
V 3 HOH D 6 1006 1006 HOH HOH . 
V 3 HOH D 7 1007 1007 HOH HOH . 
V 3 HOH D 8 1008 1008 HOH HOH . 
V 3 HOH D 9 1009 1009 HOH HOH . 
V 3 HOH D 10 1010 1010 HOH HOH . 
V 3 HOH D 11 1011 1011 HOH HOH . 
V 3 HOH D 12 1012 1012 HOH HOH . 
V 3 HOH D 13 1013 1013 HOH HOH . 
V 3 HOH D 14 1014 1014 HOH HOH . 
V 3 HOH D 15 1015 1015 HOH HOH . 
V 3 HOH D 16 1016 1016 HOH HOH . 
W 3 HOH E 1 1001 1001 HOH HOH . 
W 3 HOH E 2 1002 1002 HOH HOH . 
W 3 HOH E 3 1003 1003 HOH HOH . 
W 3 HOH E 4 1004 1004 HOH HOH . 
W 3 HOH E 5 1005 1005 HOH HOH . 
W 3 HOH E 6 1006 1006 HOH HOH . 
W 3 HOH E 7 1007 1007 HOH HOH . 
W 3 HOH E 8 1008 1008 HOH HOH . 
W 3 HOH E 9 1009 1009 HOH HOH . 
W 3 HOH E 10 1010 1010 HOH HOH . 
W 3 HOH E 11 1011 1011 HOH HOH . 
W 3 HOH E 12 1012 1012 HOH HOH . 
W 3 HOH E 13 1013 1013 HOH HOH . 
W 3 HOH E 14 1014 1014 HOH HOH . 
W 3 HOH E 15 1015 1015 HOH HOH . 
W 3 HOH E 16 1016 1016 HOH HOH . 
X 3 HOH F 1 1001 1001 HOH HOH . 
X 3 HOH F 2 1002 1002 HOH HOH . 
X 3 HOH F 3 1003 1003 HOH HOH . 
X 3 HOH F 4 1004 1004 HOH HOH . 
X 3 HOH F 5 1005 1005 HOH HOH . 
X 3 HOH F 6 1006 1006 HOH HOH . 
X 3 HOH F 7 1007 1007 HOH HOH . 
X 3 HOH F 8 1008 1008 HOH HOH . 
X 3 HOH F 9 1009 1009 HOH HOH . 
X 3 HOH F 10 1010 1010 HOH HOH . 
X 3 HOH F 11 1011 1011 HOH HOH . 
X 3 HOH F 12 1012 1012 HOH HOH . 
X 3 HOH F 13 1013 1013 HOH HOH . 
X 3 HOH F 14 1014 1014 HOH HOH . 
X 3 HOH F 15 1015 1015 HOH HOH . 
X 3 HOH F 16 1016 1016 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB ADP . . . R 2 69.084 82.362 130.131 1 88.34 ? PB ADP 900 F 1 
HETATM 2 O O1B ADP . . . R 2 69.217 83.173 128.886 1 138.23 ? O1B ADP 900 F 1 
HETATM 3 O O2B ADP . . . R 2 68.361 83.087 131.209 1 76.34 ? O2B ADP 900 F 1 
HETATM 4 O O3B ADP . . . R 2 70.33 81.645 130.555 1 66.61 ? O3B ADP 900 F 1 
HETATM 5 P PA ADP . . . R 2 68.168 80.205 128.569 1 69.39 ? PA ADP 900 F 1 
HETATM 6 O O1A ADP . . . R 2 67.019 80.503 127.674 1 57.13 ? O1A ADP 900 F 1 
HETATM 7 O O2A ADP . . . R 2 69.579 80.284 128.077 1 66.96 ? O2A ADP 900 F 1 
HETATM 8 O O3A ADP . . . R 2 68.052 81.181 129.819 1 66.21 ? O3A ADP 900 F 1 
HETATM 9 O O5' ADP . . . R 2 67.893 78.78 129.255 1 60.1 ? O5' ADP 900 F 1 
HETATM 10 C C5' ADP . . . R 2 68.703 77.637 129.015 1 50.19 ? C5' ADP 900 F 1 
HETATM 11 C C4' ADP . . . R 2 67.844 76.399 128.78 1 48.28 ? C4' ADP 900 F 1 
HETATM 12 O O4' ADP . . . R 2 67.153 75.984 129.959 1 57.01 ? O4' ADP 900 F 1 
HETATM 13 C C3' ADP . . . R 2 66.809 76.621 127.712 1 56.01 ? C3' ADP 900 F 1 
HETATM 14 O O3' ADP . . . R 2 67.129 75.769 126.625 1 43.21 ? O3' ADP 900 F 1 
HETATM 15 C C2' ADP . . . R 2 65.505 76.161 128.309 1 38.04 ? C2' ADP 900 F 1 
HETATM 16 O O2' ADP . . . R 2 64.962 75.076 127.562 1 66.36 ? O2' ADP 900 F 1 
HETATM 17 C C1' ADP . . . R 2 65.793 75.694 129.712 1 45.41 ? C1' ADP 900 F 1 
HETATM 18 N N9 ADP . . . R 2 65.013 76.59 130.559 1 41.71 ? N9 ADP 900 F 1 
HETATM 19 C C8 ADP . . . R 2 65.527 77.56 131.314 1 46.84 ? C8 ADP 900 F 1 
HETATM 20 N N7 ADP . . . R 2 64.55 78.226 131.949 1 39.61 ? N7 ADP 900 F 1 
HETATM 21 C C5 ADP . . . R 2 63.386 77.683 131.595 1 41.82 ? C5 ADP 900 F 1 
HETATM 22 C C6 ADP . . . R 2 61.973 77.92 131.919 1 53.39 ? C6 ADP 900 F 1 
HETATM 23 N N6 ADP . . . R 2 61.615 78.903 132.774 1 56.24 ? N6 ADP 900 F 1 
HETATM 24 N N1 ADP . . . R 2 61.063 77.134 131.338 1 61.62 ? N1 ADP 900 F 1 
HETATM 25 C C2 ADP . . . R 2 61.417 76.157 130.495 1 54.07 ? C2 ADP 900 F 1 
HETATM 26 N N3 ADP . . . R 2 62.684 75.885 130.158 1 53.06 ? N3 ADP 900 F 1 
HETATM 27 C C4 ADP . . . R 2 63.696 76.603 130.671 1 40.85 ? C4 ADP 900 F 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           42 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           27 
#