data_5FZ0 # _model_server_result.job_id VVbFop9rAxCOhcWaKxq1Xg _model_server_result.datetime_utc '2025-01-10 08:30:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5fz0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1759}' # _entry.id 5FZ0 # _exptl.entry_id 5FZ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5FZ0 _cell.length_a 143.88 _cell.length_b 143.88 _cell.length_c 153.47 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FZ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 208 A HIS 499 1_555 F MN MN . A MN 1758 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc2 A OE2 GLU 210 A GLU 501 1_555 F MN MN . A MN 1758 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc3 A NE2 HIS 296 A HIS 587 1_555 F MN MN . A MN 1758 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc4 A SG CYS 401 A CYS 692 1_555 B ZN ZN . A ZN 1754 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc5 A SG CYS 404 A CYS 695 1_555 B ZN ZN . A ZN 1754 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc6 A SG CYS 415 A CYS 706 1_555 C ZN ZN . A ZN 1755 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc7 A SG CYS 417 A CYS 708 1_555 C ZN ZN . A ZN 1755 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc8 A SG CYS 424 A CYS 715 1_555 B ZN ZN . A ZN 1754 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc9 A ND1 HIS 427 A HIS 718 1_555 B ZN ZN . A ZN 1754 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc10 A SG CYS 432 A CYS 723 1_555 C ZN ZN . A ZN 1755 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc11 A SG CYS 434 A CYS 725 1_555 C ZN ZN . A ZN 1755 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? metalc ? metalc12 F MN MN . A MN 1758 1_555 O N DJ6 . A DJ6 1767 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc13 F MN MN . A MN 1758 1_555 Q O HOH . A HOH 2032 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc14 F MN MN . A MN 1758 1_555 Q O HOH . A HOH 2037 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 124 n n N1 C6 EPE sing 125 n n N1 C9 EPE sing 126 n n C2 C3 EPE sing 127 n n C2 H21 EPE sing 128 n n C2 H22 EPE sing 129 n n C3 N4 EPE sing 130 n n C3 H31 EPE sing 131 n n C3 H32 EPE sing 132 n n N4 C5 EPE sing 133 n n N4 C7 EPE sing 134 n n C5 C6 EPE sing 135 n n C5 H51 EPE sing 136 n n C5 H52 EPE sing 137 n n C6 H61 EPE sing 138 n n C6 H62 EPE sing 139 n n C7 C8 EPE sing 140 n n C7 H71 EPE sing 141 n n C7 H72 EPE sing 142 n n C8 O8 EPE sing 143 n n C8 H81 EPE sing 144 n n C8 H82 EPE sing 145 n n O8 HO8 EPE sing 146 n n C9 C10 EPE sing 147 n n C9 H91 EPE sing 148 n n C9 H92 EPE sing 149 n n C10 S EPE sing 150 n n C10 H101 EPE sing 151 n n C10 H102 EPE sing 152 n n S O1S EPE doub 153 n n S O2S EPE doub 154 n n S O3S EPE sing 155 n n O3S HOS3 EPE sing 156 n n # _atom_sites.entry_id 5FZ0 _atom_sites.fract_transf_matrix[1][1] 0.00695 _atom_sites.fract_transf_matrix[1][2] 0.004013 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008025 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006516 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1754 1754 ZN ZN . C 2 ZN A 1 1755 1755 ZN ZN . D 3 DMS A 1 1756 1756 DMS DMS . E 3 DMS A 1 1757 1757 DMS DMS . F 4 MN A 1 1758 1758 MN MN . G 5 EPE A 1 1759 1759 EPE EPE . H 6 EDO A 1 1760 1760 EDO EDO . I 6 EDO A 1 1761 1761 EDO EDO . J 6 EDO A 1 1762 1762 EDO EDO . K 6 EDO A 1 1763 1763 EDO EDO . L 6 EDO A 1 1764 1764 EDO EDO . M 6 EDO A 1 1765 1765 EDO EDO . N 7 CL A 1 1766 1766 CL CL . O 8 DJ6 A 1 1767 1767 DJ6 DJ6 . P 9 PO4 A 1 1768 1768 PO4 PO4 . Q 10 HOH A 1 2001 2001 HOH HOH . Q 10 HOH A 2 2002 2002 HOH HOH . Q 10 HOH A 3 2003 2003 HOH HOH . Q 10 HOH A 4 2004 2004 HOH HOH . Q 10 HOH A 5 2005 2005 HOH HOH . Q 10 HOH A 6 2006 2006 HOH HOH . Q 10 HOH A 7 2007 2007 HOH HOH . Q 10 HOH A 8 2008 2008 HOH HOH . Q 10 HOH A 9 2009 2009 HOH HOH . Q 10 HOH A 10 2010 2010 HOH HOH . Q 10 HOH A 11 2011 2011 HOH HOH . Q 10 HOH A 12 2012 2012 HOH HOH . Q 10 HOH A 13 2013 2013 HOH HOH . Q 10 HOH A 14 2014 2014 HOH HOH . Q 10 HOH A 15 2015 2015 HOH HOH . Q 10 HOH A 16 2016 2016 HOH HOH . Q 10 HOH A 17 2017 2017 HOH HOH . Q 10 HOH A 18 2018 2018 HOH HOH . Q 10 HOH A 19 2019 2019 HOH HOH . Q 10 HOH A 20 2020 2020 HOH HOH . Q 10 HOH A 21 2021 2021 HOH HOH . Q 10 HOH A 22 2022 2022 HOH HOH . Q 10 HOH A 23 2023 2023 HOH HOH . Q 10 HOH A 24 2024 2024 HOH HOH . Q 10 HOH A 25 2025 2025 HOH HOH . Q 10 HOH A 26 2026 2026 HOH HOH . Q 10 HOH A 27 2027 2027 HOH HOH . Q 10 HOH A 28 2028 2028 HOH HOH . Q 10 HOH A 29 2029 2029 HOH HOH . Q 10 HOH A 30 2030 2030 HOH HOH . Q 10 HOH A 31 2031 2031 HOH HOH . Q 10 HOH A 32 2032 2032 HOH HOH . Q 10 HOH A 33 2033 2033 HOH HOH . Q 10 HOH A 34 2034 2034 HOH HOH . Q 10 HOH A 35 2035 2035 HOH HOH . Q 10 HOH A 36 2036 2036 HOH HOH . Q 10 HOH A 37 2037 2037 HOH HOH . Q 10 HOH A 38 2038 2038 HOH HOH . Q 10 HOH A 39 2039 2039 HOH HOH . Q 10 HOH A 40 2040 2040 HOH HOH . Q 10 HOH A 41 2041 2041 HOH HOH . Q 10 HOH A 42 2042 2042 HOH HOH . Q 10 HOH A 43 2043 2043 HOH HOH . Q 10 HOH A 44 2044 2044 HOH HOH . Q 10 HOH A 45 2045 2045 HOH HOH . Q 10 HOH A 46 2046 2046 HOH HOH . Q 10 HOH A 47 2047 2047 HOH HOH . Q 10 HOH A 48 2048 2048 HOH HOH . Q 10 HOH A 49 2049 2049 HOH HOH . Q 10 HOH A 50 2050 2050 HOH HOH . Q 10 HOH A 51 2051 2051 HOH HOH . Q 10 HOH A 52 2052 2052 HOH HOH . Q 10 HOH A 53 2053 2053 HOH HOH . Q 10 HOH A 54 2054 2054 HOH HOH . Q 10 HOH A 55 2055 2055 HOH HOH . Q 10 HOH A 56 2056 2056 HOH HOH . Q 10 HOH A 57 2057 2057 HOH HOH . Q 10 HOH A 58 2058 2058 HOH HOH . Q 10 HOH A 59 2059 2059 HOH HOH . Q 10 HOH A 60 2060 2060 HOH HOH . Q 10 HOH A 61 2061 2061 HOH HOH . Q 10 HOH A 62 2062 2062 HOH HOH . Q 10 HOH A 63 2063 2063 HOH HOH . Q 10 HOH A 64 2064 2064 HOH HOH . Q 10 HOH A 65 2065 2065 HOH HOH . Q 10 HOH A 66 2066 2066 HOH HOH . Q 10 HOH A 67 2067 2067 HOH HOH . Q 10 HOH A 68 2068 2068 HOH HOH . Q 10 HOH A 69 2069 2069 HOH HOH . Q 10 HOH A 70 2070 2070 HOH HOH . Q 10 HOH A 71 2071 2071 HOH HOH . Q 10 HOH A 72 2072 2072 HOH HOH . Q 10 HOH A 73 2073 2073 HOH HOH . Q 10 HOH A 74 2074 2074 HOH HOH . Q 10 HOH A 75 2075 2075 HOH HOH . Q 10 HOH A 76 2076 2076 HOH HOH . Q 10 HOH A 77 2077 2077 HOH HOH . Q 10 HOH A 78 2078 2078 HOH HOH . Q 10 HOH A 79 2079 2079 HOH HOH . Q 10 HOH A 80 2080 2080 HOH HOH . Q 10 HOH A 81 2081 2081 HOH HOH . Q 10 HOH A 82 2082 2082 HOH HOH . Q 10 HOH A 83 2083 2083 HOH HOH . Q 10 HOH A 84 2084 2084 HOH HOH . Q 10 HOH A 85 2085 2085 HOH HOH . Q 10 HOH A 86 2086 2086 HOH HOH . Q 10 HOH A 87 2087 2087 HOH HOH . Q 10 HOH A 88 2088 2088 HOH HOH . Q 10 HOH A 89 2089 2089 HOH HOH . Q 10 HOH A 90 2090 2090 HOH HOH . Q 10 HOH A 91 2091 2091 HOH HOH . Q 10 HOH A 92 2092 2092 HOH HOH . Q 10 HOH A 93 2093 2093 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . G 5 78.83 65.148 -0.614 0.84 103.25 ? N1 EPE 1759 A 1 HETATM 2 C C2 EPE . . . G 5 79.115 63.687 -0.683 0.84 98.52 ? C2 EPE 1759 A 1 HETATM 3 C C3 EPE . . . G 5 80.374 63.381 -1.512 0.84 88.91 ? C3 EPE 1759 A 1 HETATM 4 N N4 EPE . . . G 5 81.468 64.313 -1.26 0.84 98.09 ? N4 EPE 1759 A 1 HETATM 5 C C5 EPE . . . G 5 81.161 65.714 -1.038 0.84 90.79 ? C5 EPE 1759 A 1 HETATM 6 C C6 EPE . . . G 5 79.995 65.864 -0.068 0.84 95.45 ? C6 EPE 1759 A 1 HETATM 7 C C7 EPE . . . G 5 82.832 63.978 -1.644 0.84 94.28 ? C7 EPE 1759 A 1 HETATM 8 C C8 EPE . . . G 5 83.877 64.514 -0.656 0.84 84.15 ? C8 EPE 1759 A 1 HETATM 9 O O8 EPE . . . G 5 84.224 65.846 -0.944 0.84 79.42 ? O8 EPE 1759 A 1 HETATM 10 C C9 EPE . . . G 5 77.662 65.444 0.243 0.84 94.23 ? C9 EPE 1759 A 1 HETATM 11 C C10 EPE . . . G 5 77.244 66.93 0.183 0.84 90.01 ? C10 EPE 1759 A 1 HETATM 12 S S EPE . . . G 5 75.84 67.314 1.302 0.84 86.21 ? S EPE 1759 A 1 HETATM 13 O O1S EPE . . . G 5 75.485 68.728 1.471 0.84 57.89 ? O1S EPE 1759 A 1 HETATM 14 O O2S EPE . . . G 5 76.178 66.752 2.612 0.84 76.58 ? O2S EPE 1759 A 1 HETATM 15 O O3S EPE . . . G 5 74.681 66.641 0.73 0.84 85.6 ? O3S EPE 1759 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #