data_5G2C # _model_server_result.job_id l-7JNzswsjBHO_X70Sf5XQ _model_server_result.datetime_utc '2024-11-17 22:02:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5g2c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1274}' # _entry.id 5G2C # _exptl.entry_id 5G2C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 131.47 _cell.angle_gamma 90 _cell.entry_id 5G2C _cell.length_a 103.441 _cell.length_b 50.033 _cell.length_c 77.786 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5G2C _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 238 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 235 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id I _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 1273 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.227 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 290 n n C1 C2 PEG sing 291 n n C1 H11 PEG sing 292 n n C1 H12 PEG sing 293 n n O1 HO1 PEG sing 294 n n C2 O2 PEG sing 295 n n C2 H21 PEG sing 296 n n C2 H22 PEG sing 297 n n O2 C3 PEG sing 298 n n C3 C4 PEG sing 299 n n C3 H31 PEG sing 300 n n C3 H32 PEG sing 301 n n C4 O4 PEG sing 302 n n C4 H41 PEG sing 303 n n C4 H42 PEG sing 304 n n O4 HO4 PEG sing 305 n n # _atom_sites.entry_id 5G2C _atom_sites.fract_transf_matrix[1][1] 0.009667 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008544 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019987 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017157 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLA A 1 1266 1266 OLA OLA . C 2 OLA A 1 1267 1267 OLA OLA . D 2 OLA A 1 1268 1268 OLA OLA . E 2 OLA A 1 1269 1269 OLA OLA . F 2 OLA A 1 1270 1270 OLA OLA . G 2 OLA A 1 1271 1271 OLA OLA . H 3 CL A 1 1272 1272 CL CL . I 4 RET A 1 1273 1273 RET RET . J 5 PEG A 1 1274 1274 PEG PEG . K 2 OLA A 1 1275 1275 OLA OLA . L 2 OLA A 1 1276 1276 OLA OLA . M 6 HOH A 1 2001 2001 HOH HOH . M 6 HOH A 2 2002 2002 HOH HOH . M 6 HOH A 3 2003 2003 HOH HOH . M 6 HOH A 4 2004 2004 HOH HOH . M 6 HOH A 5 2005 2005 HOH HOH . M 6 HOH A 6 2006 2006 HOH HOH . M 6 HOH A 7 2007 2007 HOH HOH . M 6 HOH A 8 2008 2008 HOH HOH . M 6 HOH A 9 2009 2009 HOH HOH . M 6 HOH A 10 2010 2010 HOH HOH . M 6 HOH A 11 2011 2011 HOH HOH . M 6 HOH A 12 2012 2012 HOH HOH . M 6 HOH A 13 2013 2013 HOH HOH . M 6 HOH A 14 2014 2014 HOH HOH . M 6 HOH A 15 2015 2015 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . J 5 -22.658 10.421 23.063 1 91.92 ? C1 PEG 1274 A 1 HETATM 2 O O1 PEG . . . J 5 -22.49 11.307 24.181 1 104.64 ? O1 PEG 1274 A 1 HETATM 3 C C2 PEG . . . J 5 -23.068 9.018 23.496 1 86.63 ? C2 PEG 1274 A 1 HETATM 4 O O2 PEG . . . J 5 -23.064 8.916 24.922 1 84.13 ? O2 PEG 1274 A 1 HETATM 5 C C3 PEG . . . J 5 -23.222 7.574 25.375 1 85.74 ? C3 PEG 1274 A 1 HETATM 6 C C4 PEG . . . J 5 -21.853 6.923 25.494 1 83.3 ? C4 PEG 1274 A 1 HETATM 7 O O4 PEG . . . J 5 -22.042 5.512 25.631 1 80.25 ? O4 PEG 1274 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #