data_5G2D
#
_model_server_result.job_id            YK-PqfhPbNn5GHLP5KOq7Q 
_model_server_result.datetime_utc      '2024-11-14 06:40:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5g2d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1268}' 
#
_entry.id    5G2D 
#
_exptl.entry_id    5G2D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.461 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OLEIC ACID' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          131.89 
_cell.angle_gamma         90 
_cell.entry_id            5G2D 
_cell.length_a            103.252 
_cell.length_b            49.447 
_cell.length_c            78.402 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5G2D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NZ 
_struct_conn.ptnr1_label_comp_id            LYS 
_struct_conn.ptnr1_label_seq_id             238 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             LYS 
_struct_conn.ptnr1_auth_seq_id              235 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            J 
_struct_conn.ptnr2_label_atom_id            C15 
_struct_conn.ptnr2_label_comp_id            RET 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             RET 
_struct_conn.ptnr2_auth_seq_id              1274 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.055 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C18 H34 O2' 
_chem_comp.formula_weight    282.461 
_chem_comp.id                OLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OLEIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 OLA doub 237 n n 
C1 O2 OLA sing 238 n n 
C1 C2 OLA sing 239 n n 
O2 HO2 OLA sing 240 n n 
C2 C3 OLA sing 241 n n 
C2 H21 OLA sing 242 n n 
C2 H22 OLA sing 243 n n 
C3 C4 OLA sing 244 n n 
C3 H31 OLA sing 245 n n 
C3 H32 OLA sing 246 n n 
C4 C5 OLA sing 247 n n 
C4 H41 OLA sing 248 n n 
C4 H42 OLA sing 249 n n 
C5 C6 OLA sing 250 n n 
C5 H51 OLA sing 251 n n 
C5 H52 OLA sing 252 n n 
C6 C7 OLA sing 253 n n 
C6 H61 OLA sing 254 n n 
C6 H62 OLA sing 255 n n 
C7 C8 OLA sing 256 n n 
C7 H71 OLA sing 257 n n 
C7 H72 OLA sing 258 n n 
C8 C9 OLA sing 259 n n 
C8 H81 OLA sing 260 n n 
C8 H82 OLA sing 261 n n 
C9 C10 OLA doub 262 z n 
C9 H9 OLA sing 263 n n 
C10 C11 OLA sing 264 n n 
C10 H10 OLA sing 265 n n 
C11 C12 OLA sing 266 n n 
C11 H111 OLA sing 267 n n 
C11 H112 OLA sing 268 n n 
C12 C13 OLA sing 269 n n 
C12 H121 OLA sing 270 n n 
C12 H122 OLA sing 271 n n 
C13 C14 OLA sing 272 n n 
C13 H131 OLA sing 273 n n 
C13 H132 OLA sing 274 n n 
C14 C15 OLA sing 275 n n 
C14 H141 OLA sing 276 n n 
C14 H142 OLA sing 277 n n 
C15 C16 OLA sing 278 n n 
C15 H151 OLA sing 279 n n 
C15 H152 OLA sing 280 n n 
C16 C17 OLA sing 281 n n 
C16 H161 OLA sing 282 n n 
C16 H162 OLA sing 283 n n 
C17 C18 OLA sing 284 n n 
C17 H171 OLA sing 285 n n 
C17 H172 OLA sing 286 n n 
C18 H181 OLA sing 287 n n 
C18 H182 OLA sing 288 n n 
C18 H183 OLA sing 289 n n 
#
_atom_sites.entry_id                     5G2D 
_atom_sites.fract_transf_matrix[1][1]    0.009685 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008687 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020224 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017134 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OLA A 1 1266 1266 OLA OLA . 
C 2 OLA A 1 1267 1267 OLA OLA . 
D 2 OLA A 1 1268 1268 OLA OLA . 
E 2 OLA A 1 1269 1269 OLA OLA . 
F 2 OLA A 1 1270 1270 OLA OLA . 
G 2 OLA A 1 1271 1271 OLA OLA . 
H 2 OLA A 1 1272 1272 OLA OLA . 
I 2 OLA A 1 1273 1273 OLA OLA . 
J 3 RET A 1 1274 1274 RET RET . 
K 4 PEG A 1 1275 1275 PEG PEG . 
L 5 CL A 1 1276 1276 CL CL . 
M 5 CL A 1 1277 1277 CL CL . 
N 6 HOH A 1 2001 2001 HOH HOH . 
N 6 HOH A 2 2002 2002 HOH HOH . 
N 6 HOH A 3 2003 2003 HOH HOH . 
N 6 HOH A 4 2004 2004 HOH HOH . 
N 6 HOH A 5 2005 2005 HOH HOH . 
N 6 HOH A 6 2006 2006 HOH HOH . 
N 6 HOH A 7 2007 2007 HOH HOH . 
N 6 HOH A 8 2008 2008 HOH HOH . 
N 6 HOH A 9 2009 2009 HOH HOH . 
N 6 HOH A 10 2010 2010 HOH HOH . 
N 6 HOH A 11 2011 2011 HOH HOH . 
N 6 HOH A 12 2012 2012 HOH HOH . 
N 6 HOH A 13 2013 2013 HOH HOH . 
N 6 HOH A 14 2014 2014 HOH HOH . 
N 6 HOH A 15 2015 2015 HOH HOH . 
N 6 HOH A 16 2016 2016 HOH HOH . 
N 6 HOH A 17 2017 2017 HOH HOH . 
N 6 HOH A 18 2018 2018 HOH HOH . 
N 6 HOH A 19 2019 2019 HOH HOH . 
N 6 HOH A 20 2020 2020 HOH HOH . 
N 6 HOH A 21 2021 2021 HOH HOH . 
N 6 HOH A 22 2022 2022 HOH HOH . 
N 6 HOH A 23 2023 2023 HOH HOH . 
N 6 HOH A 24 2024 2024 HOH HOH . 
N 6 HOH A 25 2025 2025 HOH HOH . 
N 6 HOH A 26 2026 2026 HOH HOH . 
N 6 HOH A 27 2027 2027 HOH HOH . 
N 6 HOH A 28 2028 2028 HOH HOH . 
N 6 HOH A 29 2029 2029 HOH HOH . 
N 6 HOH A 30 2030 2030 HOH HOH . 
N 6 HOH A 31 2031 2031 HOH HOH . 
N 6 HOH A 32 2032 2032 HOH HOH . 
N 6 HOH A 33 2033 2033 HOH HOH . 
N 6 HOH A 34 2034 2034 HOH HOH . 
N 6 HOH A 35 2035 2035 HOH HOH . 
N 6 HOH A 36 2036 2036 HOH HOH . 
N 6 HOH A 37 2037 2037 HOH HOH . 
N 6 HOH A 38 2038 2038 HOH HOH . 
N 6 HOH A 39 2039 2039 HOH HOH . 
N 6 HOH A 40 2040 2040 HOH HOH . 
N 6 HOH A 41 2041 2041 HOH HOH . 
N 6 HOH A 42 2042 2042 HOH HOH . 
N 6 HOH A 43 2043 2043 HOH HOH . 
N 6 HOH A 44 2044 2044 HOH HOH . 
N 6 HOH A 45 2045 2045 HOH HOH . 
N 6 HOH A 46 2046 2046 HOH HOH . 
N 6 HOH A 47 2047 2047 HOH HOH . 
N 6 HOH A 48 2048 2048 HOH HOH . 
N 6 HOH A 49 2049 2049 HOH HOH . 
N 6 HOH A 50 2050 2050 HOH HOH . 
N 6 HOH A 51 2051 2051 HOH HOH . 
N 6 HOH A 52 2052 2052 HOH HOH . 
N 6 HOH A 53 2053 2053 HOH HOH . 
N 6 HOH A 54 2054 2054 HOH HOH . 
N 6 HOH A 55 2055 2055 HOH HOH . 
N 6 HOH A 56 2056 2056 HOH HOH . 
N 6 HOH A 57 2057 2057 HOH HOH . 
N 6 HOH A 58 2058 2058 HOH HOH . 
N 6 HOH A 59 2059 2059 HOH HOH . 
N 6 HOH A 60 2060 2060 HOH HOH . 
N 6 HOH A 61 2061 2061 HOH HOH . 
N 6 HOH A 62 2062 2062 HOH HOH . 
N 6 HOH A 63 2063 2063 HOH HOH . 
N 6 HOH A 64 2064 2064 HOH HOH . 
N 6 HOH A 65 2065 2065 HOH HOH . 
N 6 HOH A 66 2066 2066 HOH HOH . 
N 6 HOH A 67 2067 2067 HOH HOH . 
N 6 HOH A 68 2068 2068 HOH HOH . 
N 6 HOH A 69 2069 2069 HOH HOH . 
N 6 HOH A 70 2070 2070 HOH HOH . 
N 6 HOH A 71 2071 2071 HOH HOH . 
N 6 HOH A 72 2072 2072 HOH HOH . 
N 6 HOH A 73 2073 2073 HOH HOH . 
N 6 HOH A 74 2074 2074 HOH HOH . 
N 6 HOH A 75 2075 2075 HOH HOH . 
N 6 HOH A 76 2076 2076 HOH HOH . 
N 6 HOH A 77 2077 2077 HOH HOH . 
N 6 HOH A 78 2078 2078 HOH HOH . 
N 6 HOH A 79 2079 2079 HOH HOH . 
N 6 HOH A 80 2080 2080 HOH HOH . 
N 6 HOH A 81 2081 2081 HOH HOH . 
N 6 HOH A 82 2082 2082 HOH HOH . 
N 6 HOH A 83 2083 2083 HOH HOH . 
N 6 HOH A 84 2084 2084 HOH HOH . 
N 6 HOH A 85 2085 2085 HOH HOH . 
N 6 HOH A 86 2086 2086 HOH HOH . 
N 6 HOH A 87 2087 2087 HOH HOH . 
N 6 HOH A 88 2088 2088 HOH HOH . 
N 6 HOH A 89 2089 2089 HOH HOH . 
N 6 HOH A 90 2090 2090 HOH HOH . 
N 6 HOH A 91 2091 2091 HOH HOH . 
N 6 HOH A 92 2092 2092 HOH HOH . 
N 6 HOH A 93 2093 2093 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OLA . . . D 2 -3.747 -15.741 1.961 1 36.54 ? C1 OLA 1268 A 1 
HETATM 2 C C2 OLA . . . D 2 -4.268 -15.454 3.371 1 40.42 ? C2 OLA 1268 A 1 
HETATM 3 C C3 OLA . . . D 2 -3.238 -14.804 4.301 1 42.55 ? C3 OLA 1268 A 1 
HETATM 4 C C4 OLA . . . D 2 -3.31 -15.285 5.758 1 45.73 ? C4 OLA 1268 A 1 
HETATM 5 C C5 OLA . . . D 2 -4.166 -14.408 6.662 1 46.22 ? C5 OLA 1268 A 1 
HETATM 6 C C6 OLA . . . D 2 -3.78 -14.535 8.137 1 50.21 ? C6 OLA 1268 A 1 
HETATM 7 C C7 OLA . . . D 2 -4.584 -13.561 9.023 1 54.03 ? C7 OLA 1268 A 1 
HETATM 8 C C8 OLA . . . D 2 -3.821 -13.095 10.271 1 54.01 ? C8 OLA 1268 A 1 
HETATM 9 C C9 OLA . . . D 2 -3.673 -14.23 11.257 1 51.73 ? C9 OLA 1268 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           347 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#