data_5G2N # _model_server_result.job_id dr38p-JKW6w2efhWwdsOpg _model_server_result.datetime_utc '2024-10-18 16:31:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5g2n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2001}' # _entry.id 5G2N # _exptl.entry_id 5G2N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 480.52 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-azanyl-~{N}-[7-methoxy-8-(3-morpholin-4-ylpropoxy)-2,3-dihydroimidazo[1,2-c]quinazolin-5-yl]pyrimidine-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.11 _cell.angle_gamma 90 _cell.entry_id 5G2N _cell.length_a 144.762 _cell.length_b 68.336 _cell.length_c 106.472 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5G2N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H28 N8 O4' _chem_comp.formula_weight 480.52 _chem_comp.id 6E2 _chem_comp.mon_nstd_flag . _chem_comp.name 2-azanyl-~{N}-[7-methoxy-8-(3-morpholin-4-ylpropoxy)-2,3-dihydroimidazo[1,2-c]quinazolin-5-yl]pyrimidine-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N32 C33 6E2 sing 1 n n N32 C7 6E2 doub 2 n n C33 C34 6E2 sing 3 n n C34 N8 6E2 sing 4 n n C7 N8 6E2 sing 5 n n C7 C1 6E2 sing 6 n n C3 C1 6E2 doub 7 n y C3 C5 6E2 sing 8 n y N8 C10 6E2 sing 9 n n C1 C2 6E2 sing 10 n y C5 C6 6E2 doub 11 n y C10 N11 6E2 sing 12 n n C10 N9 6E2 doub 13 n n N11 C12 6E2 sing 14 n n C2 N9 6E2 sing 15 n n C2 C4 6E2 doub 16 n y C6 C4 6E2 sing 17 n y C6 O22 6E2 sing 18 n n C15 N17 6E2 doub 19 n y C15 C14 6E2 sing 20 n y N17 C19 6E2 sing 21 n y C4 O20 6E2 sing 22 n n O22 C23 6E2 sing 23 n n C21 O20 6E2 sing 24 n n C23 C24 6E2 sing 25 n n C12 C14 6E2 sing 26 n n C12 O13 6E2 doub 27 n n C14 C16 6E2 doub 28 n y C19 N35 6E2 sing 29 n n C19 N18 6E2 doub 30 n y C24 C25 6E2 sing 31 n n C16 N18 6E2 sing 32 n y C28 N26 6E2 sing 33 n n C28 C30 6E2 sing 34 n n C25 N26 6E2 sing 35 n n N26 C27 6E2 sing 36 n n C30 O31 6E2 sing 37 n n C27 C29 6E2 sing 38 n n O31 C29 6E2 sing 39 n n C28 H1 6E2 sing 40 n n C30 H2 6E2 sing 41 n n C29 H3 6E2 sing 42 n n C29 H4 6E2 sing 43 n n C27 H5 6E2 sing 44 n n C27 H6 6E2 sing 45 n n C25 H7 6E2 sing 46 n n C25 H8 6E2 sing 47 n n C24 H9 6E2 sing 48 n n C24 H10 6E2 sing 49 n n C23 H11 6E2 sing 50 n n C23 H12 6E2 sing 51 n n C21 H13 6E2 sing 52 n n C21 H14 6E2 sing 53 n n C21 H15 6E2 sing 54 n n C5 H16 6E2 sing 55 n n C3 H17 6E2 sing 56 n n C33 H19 6E2 sing 57 n n C33 H20 6E2 sing 58 n n C34 H21 6E2 sing 59 n n C34 H22 6E2 sing 60 n n N11 H23 6E2 sing 61 n n C16 H24 6E2 sing 62 n n N35 H25 6E2 sing 63 n n N35 H26 6E2 sing 64 n n C15 H27 6E2 sing 65 n n C28 H18 6E2 sing 66 n n C30 H28 6E2 sing 67 n n # _atom_sites.entry_id 5G2N _atom_sites.fract_transf_matrix[1][1] 0.006908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000618 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6E2 A 1 2001 2001 6E2 6E2 . C 3 SO4 A 1 2092 2092 SO4 SO4 . D 4 HOH A 1 3001 3001 HOH HOH . D 4 HOH A 2 3002 3002 HOH HOH . D 4 HOH A 3 3003 3003 HOH HOH . D 4 HOH A 4 3004 3004 HOH HOH . D 4 HOH A 5 3005 3005 HOH HOH . D 4 HOH A 6 3006 3006 HOH HOH . D 4 HOH A 7 3007 3007 HOH HOH . D 4 HOH A 8 3008 3008 HOH HOH . D 4 HOH A 9 3009 3009 HOH HOH . D 4 HOH A 10 3010 3010 HOH HOH . D 4 HOH A 11 3011 3011 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C28 6E2 . . . B 2 54.671 16.265 34.189 1 86.84 ? C28 6E2 2001 A 1 HETATM 2 C C30 6E2 . . . B 2 55.816 15.652 35.07 1 88.19 ? C30 6E2 2001 A 1 HETATM 3 O O31 6E2 . . . B 2 55.781 15.913 36.531 1 90.28 ? O31 6E2 2001 A 1 HETATM 4 C C29 6E2 . . . B 2 54.444 15.837 37.077 1 88.48 ? C29 6E2 2001 A 1 HETATM 5 C C27 6E2 . . . B 2 53.672 16.993 36.425 1 87.94 ? C27 6E2 2001 A 1 HETATM 6 N N26 6E2 . . . B 2 53.483 16.854 34.934 1 85.91 ? N26 6E2 2001 A 1 HETATM 7 C C25 6E2 . . . B 2 52.157 16.269 34.515 1 81.07 ? C25 6E2 2001 A 1 HETATM 8 C C24 6E2 . . . B 2 51.537 17.009 33.286 1 77.61 ? C24 6E2 2001 A 1 HETATM 9 C C23 6E2 . . . B 2 51.368 16.099 32.042 1 73.45 ? C23 6E2 2001 A 1 HETATM 10 O O22 6E2 . . . B 2 50.006 15.851 31.995 1 69.48 ? O22 6E2 2001 A 1 HETATM 11 C C6 6E2 . . . B 2 49.334 14.828 31.387 1 65.93 ? C6 6E2 2001 A 1 HETATM 12 C C4 6E2 . . . B 2 47.98 14.591 31.711 1 64 ? C4 6E2 2001 A 1 HETATM 13 C C2 6E2 . . . B 2 47.239 13.589 31.113 1 61.77 ? C2 6E2 2001 A 1 HETATM 14 N N9 6E2 . . . B 2 45.94 13.398 31.388 1 60.3 ? N9 6E2 2001 A 1 HETATM 15 O O20 6E2 . . . B 2 47.348 15.357 32.613 1 64.66 ? O20 6E2 2001 A 1 HETATM 16 C C21 6E2 . . . B 2 46.678 16.465 32.003 1 64.9 ? C21 6E2 2001 A 1 HETATM 17 C C5 6E2 . . . B 2 49.926 14.013 30.46 1 64.68 ? C5 6E2 2001 A 1 HETATM 18 C C3 6E2 . . . B 2 49.184 13.002 29.854 1 62.35 ? C3 6E2 2001 A 1 HETATM 19 C C1 6E2 . . . B 2 47.856 12.789 30.164 1 61.52 ? C1 6E2 2001 A 1 HETATM 20 C C7 6E2 . . . B 2 47.109 11.786 29.548 1 59.2 ? C7 6E2 2001 A 1 HETATM 21 N N32 6E2 . . . B 2 47.431 10.926 28.636 1 58.07 ? N32 6E2 2001 A 1 HETATM 22 C C33 6E2 . . . B 2 46.482 9.832 28.66 1 56.2 ? C33 6E2 2001 A 1 HETATM 23 C C34 6E2 . . . B 2 45.241 10.506 29.122 1 55.53 ? C34 6E2 2001 A 1 HETATM 24 N N8 6E2 . . . B 2 45.773 11.609 29.857 1 57.04 ? N8 6E2 2001 A 1 HETATM 25 C C10 6E2 . . . B 2 45.19 12.417 30.79 1 58.66 ? C10 6E2 2001 A 1 HETATM 26 N N11 6E2 . . . B 2 43.89 12.141 31.068 1 57.81 ? N11 6E2 2001 A 1 HETATM 27 C C12 6E2 . . . B 2 43.233 12.692 32.084 1 58.46 ? C12 6E2 2001 A 1 HETATM 28 O O13 6E2 . . . B 2 43.749 13.472 32.884 1 60.5 ? O13 6E2 2001 A 1 HETATM 29 C C14 6E2 . . . B 2 41.824 12.169 32.335 1 57.31 ? C14 6E2 2001 A 1 HETATM 30 C C16 6E2 . . . B 2 41.12 12.557 33.483 1 57.87 ? C16 6E2 2001 A 1 HETATM 31 N N18 6E2 . . . B 2 39.91 12.077 33.708 1 57.04 ? N18 6E2 2001 A 1 HETATM 32 C C19 6E2 . . . B 2 39.378 11.215 32.82 1 56.27 ? C19 6E2 2001 A 1 HETATM 33 N N35 6E2 . . . B 2 38.172 10.722 33.032 1 55.5 ? N35 6E2 2001 A 1 HETATM 34 N N17 6E2 . . . B 2 40.044 10.815 31.709 1 55.37 ? N17 6E2 2001 A 1 HETATM 35 C C15 6E2 . . . B 2 41.248 11.257 31.478 1 55.64 ? C15 6E2 2001 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #