data_5G6E # _model_server_result.job_id uSYyjeYX2stGnrCsWifWSg _model_server_result.datetime_utc '2024-11-21 23:26:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5g6e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":904}' # _entry.id 5G6E # _exptl.entry_id 5G6E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.378 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-(((3-(PYRIDIN-3-YL)PROPYL)AMINO)METHYL)QUINOLIN-2- _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5G6E _cell.length_a 80.39 _cell.length_b 94.6 _cell.length_c 61.81 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5G6E _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H20 N4' _chem_comp.formula_weight 292.378 _chem_comp.id XH8 _chem_comp.mon_nstd_flag . _chem_comp.name 7-(((3-(PYRIDIN-3-YL)PROPYL)AMINO)METHYL)QUINOLIN-2- _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 C02 XH8 sing 504 n n C02 C03 XH8 sing 505 n y C02 N22 XH8 doub 506 n y C03 C04 XH8 doub 507 n y C04 C05 XH8 sing 508 n y C05 C06 XH8 sing 509 n y C05 C21 XH8 doub 510 n y C06 C07 XH8 doub 511 n y C07 C08 XH8 sing 512 n y C08 C09 XH8 sing 513 n n C08 C20 XH8 doub 514 n y C09 N10 XH8 sing 515 n n N10 C11 XH8 sing 516 n n C11 C12 XH8 sing 517 n n C12 C13 XH8 sing 518 n n C13 C14 XH8 sing 519 n n C14 C15 XH8 sing 520 n y C14 C19 XH8 doub 521 n y C15 C16 XH8 doub 522 n y C16 C17 XH8 sing 523 n y C17 N18 XH8 doub 524 n y N18 C19 XH8 sing 525 n y C20 C21 XH8 sing 526 n y C21 N22 XH8 sing 527 n y N01 H011 XH8 sing 528 n n N01 H012 XH8 sing 529 n n C03 H03 XH8 sing 530 n n C04 H04 XH8 sing 531 n n C06 H06 XH8 sing 532 n n C07 H07 XH8 sing 533 n n C09 H091 XH8 sing 534 n n C09 H092 XH8 sing 535 n n C20 H20 XH8 sing 536 n n N10 H10 XH8 sing 537 n n C11 H111 XH8 sing 538 n n C11 H112 XH8 sing 539 n n C12 H121 XH8 sing 540 n n C12 H122 XH8 sing 541 n n C13 H131 XH8 sing 542 n n C13 H132 XH8 sing 543 n n C15 H15 XH8 sing 544 n n C19 H19 XH8 sing 545 n n C16 H16 XH8 sing 546 n n C17 H17 XH8 sing 547 n n # _atom_sites.entry_id 5G6E _atom_sites.fract_transf_matrix[1][1] 0.012439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010571 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016179 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 901 901 HEM HEM . C 3 H4B A 1 902 902 H4B H4B . D 4 CL A 1 903 903 CL CL . E 5 XH8 A 1 904 904 XH8 XH8 . F 6 GOL A 1 905 905 GOL GOL . G 7 HOH A 1 2001 2001 HOH HOH . G 7 HOH A 2 2002 2002 HOH HOH . G 7 HOH A 3 2003 2003 HOH HOH . G 7 HOH A 4 2004 2004 HOH HOH . G 7 HOH A 5 2005 2005 HOH HOH . G 7 HOH A 6 2006 2006 HOH HOH . G 7 HOH A 7 2007 2007 HOH HOH . G 7 HOH A 8 2008 2008 HOH HOH . G 7 HOH A 9 2009 2009 HOH HOH . G 7 HOH A 10 2010 2010 HOH HOH . G 7 HOH A 11 2011 2011 HOH HOH . G 7 HOH A 12 2012 2012 HOH HOH . G 7 HOH A 13 2013 2013 HOH HOH . G 7 HOH A 14 2014 2014 HOH HOH . G 7 HOH A 15 2015 2015 HOH HOH . G 7 HOH A 16 2016 2016 HOH HOH . G 7 HOH A 17 2017 2017 HOH HOH . G 7 HOH A 18 2018 2018 HOH HOH . G 7 HOH A 19 2019 2019 HOH HOH . G 7 HOH A 20 2020 2020 HOH HOH . G 7 HOH A 21 2021 2021 HOH HOH . G 7 HOH A 22 2022 2022 HOH HOH . G 7 HOH A 23 2023 2023 HOH HOH . G 7 HOH A 24 2024 2024 HOH HOH . G 7 HOH A 25 2025 2025 HOH HOH . G 7 HOH A 26 2026 2026 HOH HOH . G 7 HOH A 27 2027 2027 HOH HOH . G 7 HOH A 28 2028 2028 HOH HOH . G 7 HOH A 29 2029 2029 HOH HOH . G 7 HOH A 30 2030 2030 HOH HOH . G 7 HOH A 31 2031 2031 HOH HOH . G 7 HOH A 32 2032 2032 HOH HOH . G 7 HOH A 33 2033 2033 HOH HOH . G 7 HOH A 34 2034 2034 HOH HOH . G 7 HOH A 35 2035 2035 HOH HOH . G 7 HOH A 36 2036 2036 HOH HOH . G 7 HOH A 37 2037 2037 HOH HOH . G 7 HOH A 38 2038 2038 HOH HOH . G 7 HOH A 39 2039 2039 HOH HOH . G 7 HOH A 40 2040 2040 HOH HOH . G 7 HOH A 41 2041 2041 HOH HOH . G 7 HOH A 42 2042 2042 HOH HOH . G 7 HOH A 43 2043 2043 HOH HOH . G 7 HOH A 44 2044 2044 HOH HOH . G 7 HOH A 45 2045 2045 HOH HOH . G 7 HOH A 46 2046 2046 HOH HOH . G 7 HOH A 47 2047 2047 HOH HOH . G 7 HOH A 48 2048 2048 HOH HOH . G 7 HOH A 49 2049 2049 HOH HOH . G 7 HOH A 50 2050 2050 HOH HOH . G 7 HOH A 51 2051 2051 HOH HOH . G 7 HOH A 52 2052 2052 HOH HOH . G 7 HOH A 53 2053 2053 HOH HOH . G 7 HOH A 54 2054 2054 HOH HOH . G 7 HOH A 55 2055 2055 HOH HOH . G 7 HOH A 56 2056 2056 HOH HOH . G 7 HOH A 57 2057 2057 HOH HOH . G 7 HOH A 58 2058 2058 HOH HOH . G 7 HOH A 59 2059 2059 HOH HOH . G 7 HOH A 60 2060 2060 HOH HOH . G 7 HOH A 61 2061 2061 HOH HOH . G 7 HOH A 62 2062 2062 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 XH8 . . . E 5 1.739 17.609 26.475 1 11.4 ? N01 XH8 904 A 1 HETATM 2 C C02 XH8 . . . E 5 2.42 17.626 25.2 1 16.62 ? C02 XH8 904 A 1 HETATM 3 C C03 XH8 . . . E 5 1.955 18.452 24.148 1 15.32 ? C03 XH8 904 A 1 HETATM 4 C C04 XH8 . . . E 5 2.632 18.442 22.935 1 17.49 ? C04 XH8 904 A 1 HETATM 5 C C05 XH8 . . . E 5 3.802 17.591 22.785 1 21.33 ? C05 XH8 904 A 1 HETATM 6 C C06 XH8 . . . E 5 4.516 17.575 21.528 1 23.01 ? C06 XH8 904 A 1 HETATM 7 C C07 XH8 . . . E 5 5.666 16.742 21.379 1 24.41 ? C07 XH8 904 A 1 HETATM 8 C C08 XH8 . . . E 5 6.11 15.932 22.45 1 25.81 ? C08 XH8 904 A 1 HETATM 9 C C09 XH8 . . . E 5 7.314 15.059 22.285 1 28.98 ? C09 XH8 904 A 1 HETATM 10 N N10 XH8 . . . E 5 7.536 14.81 20.883 1 35.8 ? N10 XH8 904 A 1 HETATM 11 C C11 XH8 . . . E 5 8.901 14.417 20.666 1 38.53 ? C11 XH8 904 A 1 HETATM 12 C C12 XH8 . . . E 5 9.157 13.029 21.251 1 35.99 ? C12 XH8 904 A 1 HETATM 13 C C13 XH8 . . . E 5 10.523 12.447 20.772 1 45.06 ? C13 XH8 904 A 1 HETATM 14 C C14 XH8 . . . E 5 11.593 12.48 21.955 1 74.17 ? C14 XH8 904 A 1 HETATM 15 C C15 XH8 . . . E 5 12.385 13.589 22.14 1 72.5 ? C15 XH8 904 A 1 HETATM 16 C C16 XH8 . . . E 5 13.311 13.601 23.187 1 72 ? C16 XH8 904 A 1 HETATM 17 C C17 XH8 . . . E 5 13.405 12.508 24.011 1 73.35 ? C17 XH8 904 A 1 HETATM 18 N N18 XH8 . . . E 5 12.618 11.439 23.812 1 75.14 ? N18 XH8 904 A 1 HETATM 19 C C19 XH8 . . . E 5 11.721 11.404 22.811 1 74.93 ? C19 XH8 904 A 1 HETATM 20 C C20 XH8 . . . E 5 5.42 15.945 23.671 1 23.87 ? C20 XH8 904 A 1 HETATM 21 C C21 XH8 . . . E 5 4.226 16.807 23.829 1 21.55 ? C21 XH8 904 A 1 HETATM 22 N N22 XH8 . . . E 5 3.527 16.834 25.028 1 21.9 ? N22 XH8 904 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #