data_5G6L # _model_server_result.job_id DofkW94Nu3MXOpMg5JJdRw _model_server_result.datetime_utc '2024-10-13 05:18:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5g6l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":904}' # _entry.id 5G6L # _exptl.entry_id 5G6L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 327.808 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-[[4-chloranyl-3-(methylaminomethyl)phenoxy]methyl]quinolin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5G6L _cell.length_a 80.71 _cell.length_b 94.39 _cell.length_c 61.26 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5G6L _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 66 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 66 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 901 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.7 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C18 H18 Cl N3 O' _chem_comp.formula_weight 327.808 _chem_comp.id XEB _chem_comp.mon_nstd_flag . _chem_comp.name 7-[[4-chloranyl-3-(methylaminomethyl)phenoxy]methyl]quinolin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 C02 XEB doub 504 n y N01 C10 XEB sing 505 n y C02 N02 XEB sing 506 n n C02 C03 XEB sing 507 n y C03 C04 XEB doub 508 n y C04 C05 XEB sing 509 n y C05 C06 XEB doub 510 n y C05 C10 XEB sing 511 n y C06 C07 XEB sing 512 n y C07 C08 XEB doub 513 n y C08 C09 XEB sing 514 n y C08 C11 XEB sing 515 n n C09 C10 XEB doub 516 n y C11 O12 XEB sing 517 n n O12 C21 XEB sing 518 n n C21 C22 XEB doub 519 n y C21 C26 XEB sing 520 n y C22 C23 XEB sing 521 n y C23 C24 XEB doub 522 n y C24 C25 XEB sing 523 n y C24 CL XEB sing 524 n n C25 C26 XEB doub 525 n y C25 C28 XEB sing 526 n n C28 N29 XEB sing 527 n n N29 C30 XEB sing 528 n n N02 HN02 XEB sing 529 n n N02 HN0A XEB sing 530 n n C03 H03 XEB sing 531 n n C04 H04 XEB sing 532 n n C06 H06 XEB sing 533 n n C07 H07 XEB sing 534 n n C09 H09 XEB sing 535 n n C11 H11 XEB sing 536 n n C11 H11A XEB sing 537 n n C22 H22 XEB sing 538 n n C23 H23 XEB sing 539 n n C26 H26 XEB sing 540 n n C28 H28 XEB sing 541 n n C28 H28A XEB sing 542 n n N29 HN29 XEB sing 543 n n C30 H30 XEB sing 544 n n C30 H30A XEB sing 545 n n C30 H30B XEB sing 546 n n # _atom_sites.entry_id 5G6L _atom_sites.fract_transf_matrix[1][1] 0.01239 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010594 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016324 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 901 901 HEM HEM . C 3 H4B A 1 902 902 H4B H4B . D 4 CL A 1 903 903 CL CL . E 5 XEB A 1 904 904 XEB XEB . F 6 GOL A 1 905 905 GOL GOL . G 7 HOH A 1 2001 2001 HOH HOH . G 7 HOH A 2 2002 2002 HOH HOH . G 7 HOH A 3 2003 2003 HOH HOH . G 7 HOH A 4 2004 2004 HOH HOH . G 7 HOH A 5 2005 2005 HOH HOH . G 7 HOH A 6 2006 2006 HOH HOH . G 7 HOH A 7 2007 2007 HOH HOH . G 7 HOH A 8 2008 2008 HOH HOH . G 7 HOH A 9 2009 2009 HOH HOH . G 7 HOH A 10 2010 2010 HOH HOH . G 7 HOH A 11 2011 2011 HOH HOH . G 7 HOH A 12 2012 2012 HOH HOH . G 7 HOH A 13 2013 2013 HOH HOH . G 7 HOH A 14 2014 2014 HOH HOH . G 7 HOH A 15 2015 2015 HOH HOH . G 7 HOH A 16 2016 2016 HOH HOH . G 7 HOH A 17 2017 2017 HOH HOH . G 7 HOH A 18 2018 2018 HOH HOH . G 7 HOH A 19 2019 2019 HOH HOH . G 7 HOH A 20 2020 2020 HOH HOH . G 7 HOH A 21 2021 2021 HOH HOH . G 7 HOH A 22 2022 2022 HOH HOH . G 7 HOH A 23 2023 2023 HOH HOH . G 7 HOH A 24 2024 2024 HOH HOH . G 7 HOH A 25 2025 2025 HOH HOH . G 7 HOH A 26 2026 2026 HOH HOH . G 7 HOH A 27 2027 2027 HOH HOH . G 7 HOH A 28 2028 2028 HOH HOH . G 7 HOH A 29 2029 2029 HOH HOH . G 7 HOH A 30 2030 2030 HOH HOH . G 7 HOH A 31 2031 2031 HOH HOH . G 7 HOH A 32 2032 2032 HOH HOH . G 7 HOH A 33 2033 2033 HOH HOH . G 7 HOH A 34 2034 2034 HOH HOH . G 7 HOH A 35 2035 2035 HOH HOH . G 7 HOH A 36 2036 2036 HOH HOH . G 7 HOH A 37 2037 2037 HOH HOH . G 7 HOH A 38 2038 2038 HOH HOH . G 7 HOH A 39 2039 2039 HOH HOH . G 7 HOH A 40 2040 2040 HOH HOH . G 7 HOH A 41 2041 2041 HOH HOH . G 7 HOH A 42 2042 2042 HOH HOH . G 7 HOH A 43 2043 2043 HOH HOH . G 7 HOH A 44 2044 2044 HOH HOH . G 7 HOH A 45 2045 2045 HOH HOH . G 7 HOH A 46 2046 2046 HOH HOH . G 7 HOH A 47 2047 2047 HOH HOH . G 7 HOH A 48 2048 2048 HOH HOH . G 7 HOH A 49 2049 2049 HOH HOH . G 7 HOH A 50 2050 2050 HOH HOH . G 7 HOH A 51 2051 2051 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 XEB . . . E 5 3.246 16.936 24.611 1 31.23 ? N01 XEB 904 A 1 HETATM 2 C C02 XEB . . . E 5 2.269 17.761 25.05 1 27.91 ? C02 XEB 904 A 1 HETATM 3 N N02 XEB . . . E 5 1.818 17.642 26.325 1 24.92 ? N02 XEB 904 A 1 HETATM 4 C C03 XEB . . . E 5 1.732 18.726 24.203 1 23.78 ? C03 XEB 904 A 1 HETATM 5 C C04 XEB . . . E 5 2.203 18.829 22.899 1 26.79 ? C04 XEB 904 A 1 HETATM 6 C C05 XEB . . . E 5 3.209 17.97 22.473 1 27.91 ? C05 XEB 904 A 1 HETATM 7 C C06 XEB . . . E 5 3.698 18.058 21.175 1 27.61 ? C06 XEB 904 A 1 HETATM 8 C C07 XEB . . . E 5 4.703 17.191 20.76 1 28.17 ? C07 XEB 904 A 1 HETATM 9 C C08 XEB . . . E 5 5.226 16.245 21.637 1 29.93 ? C08 XEB 904 A 1 HETATM 10 C C09 XEB . . . E 5 4.737 16.157 22.935 1 26.71 ? C09 XEB 904 A 1 HETATM 11 C C10 XEB . . . E 5 3.727 17.021 23.35 1 29.91 ? C10 XEB 904 A 1 HETATM 12 C C11 XEB . . . E 5 6.325 15.328 21.158 1 31.73 ? C11 XEB 904 A 1 HETATM 13 O O12 XEB . . . E 5 7.074 16.115 20.234 1 40.77 ? O12 XEB 904 A 1 HETATM 14 C C21 XEB . . . E 5 8.16 15.638 19.544 1 48.5 ? C21 XEB 904 A 1 HETATM 15 C C22 XEB . . . E 5 8.726 16.437 18.556 1 48.94 ? C22 XEB 904 A 1 HETATM 16 C C23 XEB . . . E 5 9.826 15.987 17.84 1 54.07 ? C23 XEB 904 A 1 HETATM 17 C C24 XEB . . . E 5 10.364 14.733 18.105 1 57.63 ? C24 XEB 904 A 1 HETATM 18 C C25 XEB . . . E 5 9.809 13.928 19.093 1 57.41 ? C25 XEB 904 A 1 HETATM 19 C C26 XEB . . . E 5 8.704 14.382 19.814 1 53.31 ? C26 XEB 904 A 1 HETATM 20 CL CL XEB . . . E 5 11.786 14.181 17.159 1 96.23 ? CL XEB 904 A 1 HETATM 21 C C28 XEB . . . E 5 10.403 12.564 19.379 1 58.21 ? C28 XEB 904 A 1 HETATM 22 N N29 XEB . . . E 5 10.009 12.09 20.718 1 58.04 ? N29 XEB 904 A 1 HETATM 23 C C30 XEB . . . E 5 10.694 10.821 21.023 1 57.43 ? C30 XEB 904 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #