data_5GI6 # _model_server_result.job_id vIR9i2zUcJjvBlxSltQATg _model_server_result.datetime_utc '2024-10-18 16:21:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5gi6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5GI6 # _exptl.entry_id 5GI6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5GI6 _cell.length_a 47.688 _cell.length_b 48.536 _cell.length_c 89.48 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GI6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 5GI6 _atom_sites.fract_transf_matrix[1][1] 0.02097 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020603 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEA A 1 301 1 PEA PEA . C 3 COA A 1 302 1 COA COA . D 4 HOH A 1 401 87 HOH HOH . D 4 HOH A 2 402 69 HOH HOH . D 4 HOH A 3 403 84 HOH HOH . D 4 HOH A 4 404 43 HOH HOH . D 4 HOH A 5 405 45 HOH HOH . D 4 HOH A 6 406 23 HOH HOH . D 4 HOH A 7 407 89 HOH HOH . D 4 HOH A 8 408 1 HOH HOH . D 4 HOH A 9 409 85 HOH HOH . D 4 HOH A 10 410 35 HOH HOH . D 4 HOH A 11 411 139 HOH HOH . D 4 HOH A 12 412 14 HOH HOH . D 4 HOH A 13 413 3 HOH HOH . D 4 HOH A 14 414 8 HOH HOH . D 4 HOH A 15 415 47 HOH HOH . D 4 HOH A 16 416 21 HOH HOH . D 4 HOH A 17 417 6 HOH HOH . D 4 HOH A 18 418 61 HOH HOH . D 4 HOH A 19 419 58 HOH HOH . D 4 HOH A 20 420 22 HOH HOH . D 4 HOH A 21 421 93 HOH HOH . D 4 HOH A 22 422 81 HOH HOH . D 4 HOH A 23 423 4 HOH HOH . D 4 HOH A 24 424 52 HOH HOH . D 4 HOH A 25 425 104 HOH HOH . D 4 HOH A 26 426 75 HOH HOH . D 4 HOH A 27 427 20 HOH HOH . D 4 HOH A 28 428 103 HOH HOH . D 4 HOH A 29 429 34 HOH HOH . D 4 HOH A 30 430 77 HOH HOH . D 4 HOH A 31 431 133 HOH HOH . D 4 HOH A 32 432 55 HOH HOH . D 4 HOH A 33 433 37 HOH HOH . D 4 HOH A 34 434 135 HOH HOH . D 4 HOH A 35 435 42 HOH HOH . D 4 HOH A 36 436 91 HOH HOH . D 4 HOH A 37 437 59 HOH HOH . D 4 HOH A 38 438 136 HOH HOH . D 4 HOH A 39 439 65 HOH HOH . D 4 HOH A 40 440 26 HOH HOH . D 4 HOH A 41 441 101 HOH HOH . D 4 HOH A 42 442 15 HOH HOH . D 4 HOH A 43 443 11 HOH HOH . D 4 HOH A 44 444 108 HOH HOH . D 4 HOH A 45 445 62 HOH HOH . D 4 HOH A 46 446 2 HOH HOH . D 4 HOH A 47 447 50 HOH HOH . D 4 HOH A 48 448 5 HOH HOH . D 4 HOH A 49 449 17 HOH HOH . D 4 HOH A 50 450 10 HOH HOH . D 4 HOH A 51 451 25 HOH HOH . D 4 HOH A 52 452 48 HOH HOH . D 4 HOH A 53 453 51 HOH HOH . D 4 HOH A 54 454 64 HOH HOH . D 4 HOH A 55 455 102 HOH HOH . D 4 HOH A 56 456 36 HOH HOH . D 4 HOH A 57 457 46 HOH HOH . D 4 HOH A 58 458 100 HOH HOH . D 4 HOH A 59 459 129 HOH HOH . D 4 HOH A 60 460 41 HOH HOH . D 4 HOH A 61 461 121 HOH HOH . D 4 HOH A 62 462 92 HOH HOH . D 4 HOH A 63 463 24 HOH HOH . D 4 HOH A 64 464 57 HOH HOH . D 4 HOH A 65 465 60 HOH HOH . D 4 HOH A 66 466 28 HOH HOH . D 4 HOH A 67 467 40 HOH HOH . D 4 HOH A 68 468 111 HOH HOH . D 4 HOH A 69 469 12 HOH HOH . D 4 HOH A 70 470 113 HOH HOH . D 4 HOH A 71 471 96 HOH HOH . D 4 HOH A 72 472 27 HOH HOH . D 4 HOH A 73 473 118 HOH HOH . D 4 HOH A 74 474 97 HOH HOH . D 4 HOH A 75 475 56 HOH HOH . D 4 HOH A 76 476 66 HOH HOH . D 4 HOH A 77 477 31 HOH HOH . D 4 HOH A 78 478 86 HOH HOH . D 4 HOH A 79 479 33 HOH HOH . D 4 HOH A 80 480 88 HOH HOH . D 4 HOH A 81 481 18 HOH HOH . D 4 HOH A 82 482 78 HOH HOH . D 4 HOH A 83 483 74 HOH HOH . D 4 HOH A 84 484 13 HOH HOH . D 4 HOH A 85 485 117 HOH HOH . D 4 HOH A 86 486 112 HOH HOH . D 4 HOH A 87 487 30 HOH HOH . D 4 HOH A 88 488 32 HOH HOH . D 4 HOH A 89 489 54 HOH HOH . D 4 HOH A 90 490 76 HOH HOH . D 4 HOH A 91 491 73 HOH HOH . D 4 HOH A 92 492 145 HOH HOH . D 4 HOH A 93 493 68 HOH HOH . D 4 HOH A 94 494 134 HOH HOH . D 4 HOH A 95 495 9 HOH HOH . D 4 HOH A 96 496 16 HOH HOH . D 4 HOH A 97 497 39 HOH HOH . D 4 HOH A 98 498 107 HOH HOH . D 4 HOH A 99 499 83 HOH HOH . D 4 HOH A 100 500 53 HOH HOH . D 4 HOH A 101 501 49 HOH HOH . D 4 HOH A 102 502 105 HOH HOH . D 4 HOH A 103 503 116 HOH HOH . D 4 HOH A 104 504 94 HOH HOH . D 4 HOH A 105 505 141 HOH HOH . D 4 HOH A 106 506 99 HOH HOH . D 4 HOH A 107 507 38 HOH HOH . D 4 HOH A 108 508 7 HOH HOH . D 4 HOH A 109 509 95 HOH HOH . D 4 HOH A 110 510 110 HOH HOH . D 4 HOH A 111 511 123 HOH HOH . D 4 HOH A 112 512 80 HOH HOH . D 4 HOH A 113 513 29 HOH HOH . D 4 HOH A 114 514 122 HOH HOH . D 4 HOH A 115 515 70 HOH HOH . D 4 HOH A 116 516 119 HOH HOH . D 4 HOH A 117 517 115 HOH HOH . D 4 HOH A 118 518 114 HOH HOH . D 4 HOH A 119 519 130 HOH HOH . D 4 HOH A 120 520 90 HOH HOH . D 4 HOH A 121 521 71 HOH HOH . D 4 HOH A 122 522 106 HOH HOH . D 4 HOH A 123 523 132 HOH HOH . D 4 HOH A 124 524 143 HOH HOH . D 4 HOH A 125 525 19 HOH HOH . D 4 HOH A 126 526 44 HOH HOH . D 4 HOH A 127 527 98 HOH HOH . D 4 HOH A 128 528 124 HOH HOH . D 4 HOH A 129 529 79 HOH HOH . D 4 HOH A 130 530 138 HOH HOH . D 4 HOH A 131 531 120 HOH HOH . D 4 HOH A 132 532 131 HOH HOH . D 4 HOH A 133 533 137 HOH HOH . D 4 HOH A 134 534 140 HOH HOH . D 4 HOH A 135 535 128 HOH HOH . D 4 HOH A 136 536 144 HOH HOH . D 4 HOH A 137 537 127 HOH HOH . D 4 HOH A 138 538 109 HOH HOH . D 4 HOH A 139 539 126 HOH HOH . D 4 HOH A 140 540 142 HOH HOH . D 4 HOH A 141 541 63 HOH HOH . D 4 HOH A 142 542 72 HOH HOH . D 4 HOH A 143 543 82 HOH HOH . D 4 HOH A 144 544 125 HOH HOH . D 4 HOH A 145 545 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . C 3 9.066 -4.221 -3.006 1 22.3 ? N1A COA 302 A 1 HETATM 2 C C2A COA . . . C 3 7.823 -3.739 -2.931 1 22.24 ? C2A COA 302 A 1 HETATM 3 N N3A COA . . . C 3 6.826 -4.499 -2.435 1 21.05 ? N3A COA 302 A 1 HETATM 4 C C4A COA . . . C 3 7.103 -5.695 -1.842 1 19.27 ? C4A COA 302 A 1 HETATM 5 C C5A COA . . . C 3 8.448 -6.109 -1.758 1 20.63 ? C5A COA 302 A 1 HETATM 6 C C6A COA . . . C 3 9.436 -5.287 -2.302 1 22.85 ? C6A COA 302 A 1 HETATM 7 N N6A COA . . . C 3 10.759 -5.78 -2.493 1 23.72 ? N6A COA 302 A 1 HETATM 8 N N7A COA . . . C 3 8.458 -7.3 -1.122 1 24.05 ? N7A COA 302 A 1 HETATM 9 C C8A COA . . . C 3 7.21 -7.635 -0.814 1 22.86 ? C8A COA 302 A 1 HETATM 10 N N9A COA . . . C 3 6.355 -6.677 -1.223 1 22.49 ? N9A COA 302 A 1 HETATM 11 C C1B COA . . . C 3 4.934 -6.697 -1.104 1 21.23 ? C1B COA 302 A 1 HETATM 12 C C2B COA . . . C 3 4.19 -5.445 -0.958 1 24.11 ? C2B COA 302 A 1 HETATM 13 O O2B COA . . . C 3 3.405 -5.581 0.237 1 27.22 ? O2B COA 302 A 1 HETATM 14 C C3B COA . . . C 3 3.313 -5.312 -2.12 1 22.09 ? C3B COA 302 A 1 HETATM 15 O O3B COA . . . C 3 2.055 -4.689 -1.795 1 28.9 ? O3B COA 302 A 1 HETATM 16 P P3B COA . . . C 3 1.739 -3.226 -2.282 1 34.24 ? P3B COA 302 A 1 HETATM 17 O O7A COA . . . C 3 1.81 -2.354 -1.071 1 35.48 ? O7A COA 302 A 1 HETATM 18 O O8A COA . . . C 3 2.764 -2.721 -3.276 1 37.82 -1 O8A COA 302 A 1 HETATM 19 O O9A COA . . . C 3 0.421 -3.123 -3.026 1 30.81 -1 O9A COA 302 A 1 HETATM 20 C C4B COA . . . C 3 3.148 -6.687 -2.569 1 19.14 ? C4B COA 302 A 1 HETATM 21 O O4B COA . . . C 3 4.476 -7.262 -2.368 1 19.63 ? O4B COA 302 A 1 HETATM 22 C C5B COA . . . C 3 2.799 -6.882 -3.991 1 19.39 ? C5B COA 302 A 1 HETATM 23 O O5B COA . . . C 3 3.572 -6.077 -4.833 1 19.9 ? O5B COA 302 A 1 HETATM 24 P P1A COA . . . C 3 3.234 -6.015 -6.388 1 20.66 ? P1A COA 302 A 1 HETATM 25 O O1A COA . . . C 3 3.924 -4.821 -6.96 1 19.85 ? O1A COA 302 A 1 HETATM 26 O O2A COA . . . C 3 1.736 -5.941 -6.504 1 20.45 -1 O2A COA 302 A 1 HETATM 27 O O3A COA . . . C 3 3.723 -7.364 -7.054 1 18.64 ? O3A COA 302 A 1 HETATM 28 P P2A COA . . . C 3 5.185 -7.689 -7.585 1 19.35 ? P2A COA 302 A 1 HETATM 29 O O4A COA . . . C 3 5.286 -7.286 -9.036 1 19.47 -1 O4A COA 302 A 1 HETATM 30 O O5A COA . . . C 3 6.185 -7.009 -6.702 1 19.08 ? O5A COA 302 A 1 HETATM 31 O O6A COA . . . C 3 5.295 -9.28 -7.478 1 18.31 ? O6A COA 302 A 1 HETATM 32 C CBP COA . . . C 3 5.48 -11.334 -6.205 1 19.53 ? CBP COA 302 A 1 HETATM 33 C CCP COA . . . C 3 4.769 -9.981 -6.365 1 18.74 ? CCP COA 302 A 1 HETATM 34 C CDP COA . . . C 3 5.448 -12.033 -7.545 1 18.5 ? CDP COA 302 A 1 HETATM 35 C CEP COA . . . C 3 4.745 -12.185 -5.187 1 18.86 ? CEP COA 302 A 1 HETATM 36 C CAP COA . . . C 3 6.887 -11.108 -5.734 1 19.26 ? CAP COA 302 A 1 HETATM 37 O OAP COA . . . C 3 6.877 -10.686 -4.423 1 22.94 ? OAP COA 302 A 1 HETATM 38 C C9P COA . . . C 3 7.753 -12.347 -5.767 1 18.68 ? C9P COA 302 A 1 HETATM 39 O O9P COA . . . C 3 8.32 -12.713 -6.786 1 21.68 ? O9P COA 302 A 1 HETATM 40 N N8P COA . . . C 3 7.936 -13.083 -4.55 1 19.24 ? N8P COA 302 A 1 HETATM 41 C C7P COA . . . C 3 8.777 -14.274 -4.446 1 20.3 ? C7P COA 302 A 1 HETATM 42 C C6P COA . . . C 3 8.219 -15.506 -5.152 1 21.54 ? C6P COA 302 A 1 HETATM 43 C C5P COA . . . C 3 6.796 -15.781 -4.684 1 21.73 ? C5P COA 302 A 1 HETATM 44 O O5P COA . . . C 3 6.529 -15.781 -3.492 1 21.78 ? O5P COA 302 A 1 HETATM 45 N N4P COA . . . C 3 5.771 -16.068 -5.674 1 20.22 ? N4P COA 302 A 1 HETATM 46 C C3P COA . . . C 3 4.365 -16.315 -5.294 1 20.96 ? C3P COA 302 A 1 HETATM 47 C C2P COA . . . C 3 4.116 -17.63 -4.636 1 25.22 ? C2P COA 302 A 1 HETATM 48 S S1P COA . . . C 3 2.378 -17.982 -4.765 1 25.07 ? S1P COA 302 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #