data_5GIG # _model_server_result.job_id G_5hEXNObSbubdKCPiXjig _model_server_result.datetime_utc '2024-11-01 22:30:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5gig # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5GIG # _exptl.entry_id 5GIG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.215 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[2-[3,4-bis(oxidanyl)phenyl]ethyl]ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5GIG _cell.length_a 44.19 _cell.length_b 56.338 _cell.length_c 83.875 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GIG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H13 N O3' _chem_comp.formula_weight 195.215 _chem_comp.id 7DP _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[2-[3,4-bis(oxidanyl)phenyl]ethyl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-acetyldopamine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C10 7DP doub 1 n n C12 C10 7DP sing 2 n n C10 N02 7DP sing 3 n n C09 C07 7DP doub 4 n y C09 C11 7DP sing 5 n y C07 C05 7DP sing 6 n y N02 C04 7DP sing 7 n n C04 C03 7DP sing 8 n n O13 C11 7DP sing 9 n n C11 C08 7DP doub 10 n y C05 C03 7DP sing 11 n n C05 C06 7DP doub 12 n y C08 C06 7DP sing 13 n y C08 O14 7DP sing 14 n n N02 H1 7DP sing 15 n n C03 H2 7DP sing 16 n n C03 H3 7DP sing 17 n n C04 H4 7DP sing 18 n n C04 H5 7DP sing 19 n n C06 H6 7DP sing 20 n n C07 H7 7DP sing 21 n n C09 H8 7DP sing 22 n n C12 H9 7DP sing 23 n n C12 H10 7DP sing 24 n n C12 H11 7DP sing 25 n n O13 H12 7DP sing 26 n n O14 H13 7DP sing 27 n n # _atom_sites.entry_id 5GIG _atom_sites.fract_transf_matrix[1][1] 0.02263 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01775 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011923 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 301 1 COA COA . C 3 7DP A 1 302 1 7DP NDO . D 4 D1D A 1 303 201 D1D D1D . E 5 HOH A 1 401 174 HOH HOH . E 5 HOH A 2 402 201 HOH HOH . E 5 HOH A 3 403 71 HOH HOH . E 5 HOH A 4 404 52 HOH HOH . E 5 HOH A 5 405 80 HOH HOH . E 5 HOH A 6 406 148 HOH HOH . E 5 HOH A 7 407 120 HOH HOH . E 5 HOH A 8 408 154 HOH HOH . E 5 HOH A 9 409 151 HOH HOH . E 5 HOH A 10 410 153 HOH HOH . E 5 HOH A 11 411 130 HOH HOH . E 5 HOH A 12 412 117 HOH HOH . E 5 HOH A 13 413 177 HOH HOH . E 5 HOH A 14 414 18 HOH HOH . E 5 HOH A 15 415 79 HOH HOH . E 5 HOH A 16 416 55 HOH HOH . E 5 HOH A 17 417 29 HOH HOH . E 5 HOH A 18 418 102 HOH HOH . E 5 HOH A 19 419 225 HOH HOH . E 5 HOH A 20 420 77 HOH HOH . E 5 HOH A 21 421 72 HOH HOH . E 5 HOH A 22 422 184 HOH HOH . E 5 HOH A 23 423 45 HOH HOH . E 5 HOH A 24 424 57 HOH HOH . E 5 HOH A 25 425 136 HOH HOH . E 5 HOH A 26 426 2 HOH HOH . E 5 HOH A 27 427 90 HOH HOH . E 5 HOH A 28 428 1 HOH HOH . E 5 HOH A 29 429 83 HOH HOH . E 5 HOH A 30 430 10 HOH HOH . E 5 HOH A 31 431 203 HOH HOH . E 5 HOH A 32 432 65 HOH HOH . E 5 HOH A 33 433 194 HOH HOH . E 5 HOH A 34 434 12 HOH HOH . E 5 HOH A 35 435 212 HOH HOH . E 5 HOH A 36 436 49 HOH HOH . E 5 HOH A 37 437 209 HOH HOH . E 5 HOH A 38 438 141 HOH HOH . E 5 HOH A 39 439 138 HOH HOH . E 5 HOH A 40 440 23 HOH HOH . E 5 HOH A 41 441 4 HOH HOH . E 5 HOH A 42 442 59 HOH HOH . E 5 HOH A 43 443 46 HOH HOH . E 5 HOH A 44 444 15 HOH HOH . E 5 HOH A 45 445 3 HOH HOH . E 5 HOH A 46 446 44 HOH HOH . E 5 HOH A 47 447 143 HOH HOH . E 5 HOH A 48 448 171 HOH HOH . E 5 HOH A 49 449 62 HOH HOH . E 5 HOH A 50 450 6 HOH HOH . E 5 HOH A 51 451 182 HOH HOH . E 5 HOH A 52 452 36 HOH HOH . E 5 HOH A 53 453 56 HOH HOH . E 5 HOH A 54 454 14 HOH HOH . E 5 HOH A 55 455 135 HOH HOH . E 5 HOH A 56 456 43 HOH HOH . E 5 HOH A 57 457 26 HOH HOH . E 5 HOH A 58 458 25 HOH HOH . E 5 HOH A 59 459 140 HOH HOH . E 5 HOH A 60 460 84 HOH HOH . E 5 HOH A 61 461 161 HOH HOH . E 5 HOH A 62 462 28 HOH HOH . E 5 HOH A 63 463 155 HOH HOH . E 5 HOH A 64 464 16 HOH HOH . E 5 HOH A 65 465 69 HOH HOH . E 5 HOH A 66 466 73 HOH HOH . E 5 HOH A 67 467 32 HOH HOH . E 5 HOH A 68 468 173 HOH HOH . E 5 HOH A 69 469 24 HOH HOH . E 5 HOH A 70 470 104 HOH HOH . E 5 HOH A 71 471 17 HOH HOH . E 5 HOH A 72 472 158 HOH HOH . E 5 HOH A 73 473 200 HOH HOH . E 5 HOH A 74 474 106 HOH HOH . E 5 HOH A 75 475 74 HOH HOH . E 5 HOH A 76 476 5 HOH HOH . E 5 HOH A 77 477 95 HOH HOH . E 5 HOH A 78 478 189 HOH HOH . E 5 HOH A 79 479 86 HOH HOH . E 5 HOH A 80 480 126 HOH HOH . E 5 HOH A 81 481 101 HOH HOH . E 5 HOH A 82 482 85 HOH HOH . E 5 HOH A 83 483 35 HOH HOH . E 5 HOH A 84 484 30 HOH HOH . E 5 HOH A 85 485 81 HOH HOH . E 5 HOH A 86 486 51 HOH HOH . E 5 HOH A 87 487 127 HOH HOH . E 5 HOH A 88 488 60 HOH HOH . E 5 HOH A 89 489 114 HOH HOH . E 5 HOH A 90 490 39 HOH HOH . E 5 HOH A 91 491 37 HOH HOH . E 5 HOH A 92 492 236 HOH HOH . E 5 HOH A 93 493 128 HOH HOH . E 5 HOH A 94 494 145 HOH HOH . E 5 HOH A 95 495 13 HOH HOH . E 5 HOH A 96 496 109 HOH HOH . E 5 HOH A 97 497 48 HOH HOH . E 5 HOH A 98 498 58 HOH HOH . E 5 HOH A 99 499 75 HOH HOH . E 5 HOH A 100 500 139 HOH HOH . E 5 HOH A 101 501 133 HOH HOH . E 5 HOH A 102 502 34 HOH HOH . E 5 HOH A 103 503 19 HOH HOH . E 5 HOH A 104 504 9 HOH HOH . E 5 HOH A 105 505 38 HOH HOH . E 5 HOH A 106 506 162 HOH HOH . E 5 HOH A 107 507 7 HOH HOH . E 5 HOH A 108 508 228 HOH HOH . E 5 HOH A 109 509 70 HOH HOH . E 5 HOH A 110 510 92 HOH HOH . E 5 HOH A 111 511 222 HOH HOH . E 5 HOH A 112 512 197 HOH HOH . E 5 HOH A 113 513 53 HOH HOH . E 5 HOH A 114 514 98 HOH HOH . E 5 HOH A 115 515 107 HOH HOH . E 5 HOH A 116 516 11 HOH HOH . E 5 HOH A 117 517 187 HOH HOH . E 5 HOH A 118 518 146 HOH HOH . E 5 HOH A 119 519 123 HOH HOH . E 5 HOH A 120 520 42 HOH HOH . E 5 HOH A 121 521 40 HOH HOH . E 5 HOH A 122 522 149 HOH HOH . E 5 HOH A 123 523 198 HOH HOH . E 5 HOH A 124 524 82 HOH HOH . E 5 HOH A 125 525 179 HOH HOH . E 5 HOH A 126 526 163 HOH HOH . E 5 HOH A 127 527 8 HOH HOH . E 5 HOH A 128 528 100 HOH HOH . E 5 HOH A 129 529 172 HOH HOH . E 5 HOH A 130 530 47 HOH HOH . E 5 HOH A 131 531 191 HOH HOH . E 5 HOH A 132 532 116 HOH HOH . E 5 HOH A 133 533 76 HOH HOH . E 5 HOH A 134 534 119 HOH HOH . E 5 HOH A 135 535 216 HOH HOH . E 5 HOH A 136 536 111 HOH HOH . E 5 HOH A 137 537 168 HOH HOH . E 5 HOH A 138 538 103 HOH HOH . E 5 HOH A 139 539 50 HOH HOH . E 5 HOH A 140 540 22 HOH HOH . E 5 HOH A 141 541 61 HOH HOH . E 5 HOH A 142 542 206 HOH HOH . E 5 HOH A 143 543 27 HOH HOH . E 5 HOH A 144 544 20 HOH HOH . E 5 HOH A 145 545 159 HOH HOH . E 5 HOH A 146 546 234 HOH HOH . E 5 HOH A 147 547 121 HOH HOH . E 5 HOH A 148 548 31 HOH HOH . E 5 HOH A 149 549 21 HOH HOH . E 5 HOH A 150 550 202 HOH HOH . E 5 HOH A 151 551 134 HOH HOH . E 5 HOH A 152 552 125 HOH HOH . E 5 HOH A 153 553 33 HOH HOH . E 5 HOH A 154 554 178 HOH HOH . E 5 HOH A 155 555 186 HOH HOH . E 5 HOH A 156 556 231 HOH HOH . E 5 HOH A 157 557 232 HOH HOH . E 5 HOH A 158 558 170 HOH HOH . E 5 HOH A 159 559 108 HOH HOH . E 5 HOH A 160 560 87 HOH HOH . E 5 HOH A 161 561 147 HOH HOH . E 5 HOH A 162 562 105 HOH HOH . E 5 HOH A 163 563 118 HOH HOH . E 5 HOH A 164 564 91 HOH HOH . E 5 HOH A 165 565 207 HOH HOH . E 5 HOH A 166 566 164 HOH HOH . E 5 HOH A 167 567 137 HOH HOH . E 5 HOH A 168 568 122 HOH HOH . E 5 HOH A 169 569 196 HOH HOH . E 5 HOH A 170 570 110 HOH HOH . E 5 HOH A 171 571 131 HOH HOH . E 5 HOH A 172 572 150 HOH HOH . E 5 HOH A 173 573 41 HOH HOH . E 5 HOH A 174 574 142 HOH HOH . E 5 HOH A 175 575 188 HOH HOH . E 5 HOH A 176 576 113 HOH HOH . E 5 HOH A 177 577 144 HOH HOH . E 5 HOH A 178 578 226 HOH HOH . E 5 HOH A 179 579 238 HOH HOH . E 5 HOH A 180 580 66 HOH HOH . E 5 HOH A 181 581 169 HOH HOH . E 5 HOH A 182 582 67 HOH HOH . E 5 HOH A 183 583 176 HOH HOH . E 5 HOH A 184 584 129 HOH HOH . E 5 HOH A 185 585 233 HOH HOH . E 5 HOH A 186 586 208 HOH HOH . E 5 HOH A 187 587 63 HOH HOH . E 5 HOH A 188 588 64 HOH HOH . E 5 HOH A 189 589 54 HOH HOH . E 5 HOH A 190 590 199 HOH HOH . E 5 HOH A 191 591 99 HOH HOH . E 5 HOH A 192 592 160 HOH HOH . E 5 HOH A 193 593 152 HOH HOH . E 5 HOH A 194 594 167 HOH HOH . E 5 HOH A 195 595 224 HOH HOH . E 5 HOH A 196 596 96 HOH HOH . E 5 HOH A 197 597 181 HOH HOH . E 5 HOH A 198 598 68 HOH HOH . E 5 HOH A 199 599 115 HOH HOH . E 5 HOH A 200 600 195 HOH HOH . E 5 HOH A 201 601 211 HOH HOH . E 5 HOH A 202 602 94 HOH HOH . E 5 HOH A 203 603 89 HOH HOH . E 5 HOH A 204 604 235 HOH HOH . E 5 HOH A 205 605 215 HOH HOH . E 5 HOH A 206 606 237 HOH HOH . E 5 HOH A 207 607 192 HOH HOH . E 5 HOH A 208 608 175 HOH HOH . E 5 HOH A 209 609 78 HOH HOH . E 5 HOH A 210 610 156 HOH HOH . E 5 HOH A 211 611 132 HOH HOH . E 5 HOH A 212 612 190 HOH HOH . E 5 HOH A 213 613 180 HOH HOH . E 5 HOH A 214 614 185 HOH HOH . E 5 HOH A 215 615 112 HOH HOH . E 5 HOH A 216 616 220 HOH HOH . E 5 HOH A 217 617 88 HOH HOH . E 5 HOH A 218 618 124 HOH HOH . E 5 HOH A 219 619 230 HOH HOH . E 5 HOH A 220 620 218 HOH HOH . E 5 HOH A 221 621 183 HOH HOH . E 5 HOH A 222 622 193 HOH HOH . E 5 HOH A 223 623 93 HOH HOH . E 5 HOH A 224 624 157 HOH HOH . E 5 HOH A 225 625 223 HOH HOH . E 5 HOH A 226 626 213 HOH HOH . E 5 HOH A 227 627 204 HOH HOH . E 5 HOH A 228 628 205 HOH HOH . E 5 HOH A 229 629 214 HOH HOH . E 5 HOH A 230 630 221 HOH HOH . E 5 HOH A 231 631 217 HOH HOH . E 5 HOH A 232 632 165 HOH HOH . E 5 HOH A 233 633 219 HOH HOH . E 5 HOH A 234 634 210 HOH HOH . E 5 HOH A 235 635 97 HOH HOH . E 5 HOH A 236 636 229 HOH HOH . E 5 HOH A 237 637 227 HOH HOH . E 5 HOH A 238 638 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 7DP . . . C 3 93.796 74.309 15.153 1 13.28 ? C10 7DP 302 A 1 HETATM 2 C C11 7DP . . . C 3 99.199 78.713 16.833 1 13.41 ? C11 7DP 302 A 1 HETATM 3 O O01 7DP . . . C 3 93.556 75.409 14.681 1 13.56 ? O01 7DP 302 A 1 HETATM 4 N N02 7DP . . . C 3 94.842 74.183 16.112 1 13.29 ? N02 7DP 302 A 1 HETATM 5 C C03 7DP . . . C 3 96.949 75.063 17.091 1 13.39 ? C03 7DP 302 A 1 HETATM 6 C C04 7DP . . . C 3 95.613 75.353 16.489 1 13.98 ? C04 7DP 302 A 1 HETATM 7 C C05 7DP . . . C 3 97.765 76.347 17.04 1 13.46 ? C05 7DP 302 A 1 HETATM 8 C C06 7DP . . . C 3 97.592 77.318 18.008 1 13.18 ? C06 7DP 302 A 1 HETATM 9 C C07 7DP . . . C 3 98.637 76.562 15.958 1 14.08 ? C07 7DP 302 A 1 HETATM 10 C C08 7DP . . . C 3 98.32 78.521 17.904 1 13.71 ? C08 7DP 302 A 1 HETATM 11 C C09 7DP . . . C 3 99.37 77.748 15.87 1 13.69 ? C09 7DP 302 A 1 HETATM 12 C C12 7DP . . . C 3 93.041 73.058 14.786 1 14.15 ? C12 7DP 302 A 1 HETATM 13 O O13 7DP . . . C 3 99.914 79.902 16.73 1 14.36 ? O13 7DP 302 A 1 HETATM 14 O O14 7DP . . . C 3 98.196 79.5 18.833 1 14.47 ? O14 7DP 302 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #