data_5GIX
#
_model_server_result.job_id            64DFO5yHnFOuoFu0IMJ57w 
_model_server_result.datetime_utc      '2024-11-30 10:33:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5gix 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":607}' 
#
_entry.id    5GIX 
#
_exptl.entry_id    5GIX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         104.9 
_cell.angle_beta          89.9 
_cell.angle_gamma         100.86 
_cell.entry_id            5GIX 
_cell.length_a            38.472 
_cell.length_b            94.55 
_cell.length_c            96.105 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5GIX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,Q 1 1 
B,J,K,L,M,N,O,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 51 A CYS 53 1_555 A SG CYS 60 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 A SG CYS 73 A CYS 75 1_555 A SG CYS 89 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf3 A SG CYS 88 A CYS 90 1_555 A SG CYS 99 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 122 A CYS 124 1_555 A SG CYS 167 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf5 A SG CYS 166 A CYS 168 1_555 A SG CYS 175 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 A SG CYS 198 A CYS 200 1_555 A SG CYS 244 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
disulf ? disulf7 A SG CYS 243 A CYS 245 1_555 A SG CYS 251 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf8 A SG CYS 263 A CYS 265 1_555 A SG CYS 277 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf9 A SG CYS 276 A CYS 278 1_555 A SG CYS 287 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 A SG CYS 314 A CYS 316 1_555 A SG CYS 359 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf11 A SG CYS 358 A CYS 360 1_555 A SG CYS 367 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf12 A SG CYS 390 A CYS 392 1_555 A SG CYS 436 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf13 A SG CYS 435 A CYS 437 1_555 A SG CYS 446 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf14 A SG CYS 459 A CYS 461 1_555 A SG CYS 475 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf15 A SG CYS 474 A CYS 476 1_555 A SG CYS 485 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf16 A SG CYS 512 A CYS 514 1_555 A SG CYS 557 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf17 A SG CYS 556 A CYS 558 1_555 A SG CYS 565 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf18 B SG CYS 51 B CYS 53 1_555 B SG CYS 60 B CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf19 B SG CYS 73 B CYS 75 1_555 B SG CYS 89 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? 
disulf ? disulf20 B SG CYS 88 B CYS 90 1_555 B SG CYS 99 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf21 B SG CYS 122 B CYS 124 1_555 B SG CYS 167 B CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf22 B SG CYS 166 B CYS 168 1_555 B SG CYS 175 B CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf23 B SG CYS 198 B CYS 200 1_555 B SG CYS 244 B CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf24 B SG CYS 243 B CYS 245 1_555 B SG CYS 251 B CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf25 B SG CYS 263 B CYS 265 1_555 B SG CYS 277 B CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf26 B SG CYS 276 B CYS 278 1_555 B SG CYS 287 B CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf27 B SG CYS 314 B CYS 316 1_555 B SG CYS 359 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf28 B SG CYS 358 B CYS 360 1_555 B SG CYS 367 B CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf29 B SG CYS 390 B CYS 392 1_555 B SG CYS 436 B CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf30 B SG CYS 435 B CYS 437 1_555 B SG CYS 446 B CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf31 B SG CYS 459 B CYS 461 1_555 B SG CYS 475 B CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf32 B SG CYS 474 B CYS 476 1_555 B SG CYS 485 B CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf33 B SG CYS 512 B CYS 514 1_555 B SG CYS 557 B CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf34 B SG CYS 556 B CYS 558 1_555 B SG CYS 565 B CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
covale ? covale1 A NE ARG 115 A ARG 117 1_555 D O2 PLM . A PLM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.301 ? 
covale ? covale2 A NZ LYS 197 A LYS 199 1_555 C S09 6WF . A 6WF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? 
covale ? covale3 A CB CYS 358 A CYS 360 1_555 A SG CYS 367 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.638 ? 
covale ? covale4 A SG CYS 358 A CYS 360 1_555 A CB CYS 367 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? 
covale ? covale5 B NZ LYS 349 B LYS 351 1_555 P O2 PLM . B PLM 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.301 ? 
covale ? covale6 B CB CYS 358 B CYS 360 1_555 B SG CYS 367 B CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? 
metalc ? metalc1 A NZ LYS 197 A LYS 199 1_555 C FE1 6WF . A 6WF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.844 ? 
metalc ? metalc2 B NZ LYS 197 B LYS 199 1_555 J FE1 6WF . B 6WF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc3 B NE2 HIS 240 B HIS 242 1_555 J FE1 6WF . B 6WF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 305 n n 
C1 O2 PLM doub 306 n n 
C1 C2 PLM sing 307 n n 
O1 H PLM sing 308 n n 
C2 C3 PLM sing 309 n n 
C2 H21 PLM sing 310 n n 
C2 H22 PLM sing 311 n n 
C3 C4 PLM sing 312 n n 
C3 H31 PLM sing 313 n n 
C3 H32 PLM sing 314 n n 
C4 C5 PLM sing 315 n n 
C4 H41 PLM sing 316 n n 
C4 H42 PLM sing 317 n n 
C5 C6 PLM sing 318 n n 
C5 H51 PLM sing 319 n n 
C5 H52 PLM sing 320 n n 
C6 C7 PLM sing 321 n n 
C6 H61 PLM sing 322 n n 
C6 H62 PLM sing 323 n n 
C7 C8 PLM sing 324 n n 
C7 H71 PLM sing 325 n n 
C7 H72 PLM sing 326 n n 
C8 C9 PLM sing 327 n n 
C8 H81 PLM sing 328 n n 
C8 H82 PLM sing 329 n n 
C9 CA PLM sing 330 n n 
C9 H91 PLM sing 331 n n 
C9 H92 PLM sing 332 n n 
CA CB PLM sing 333 n n 
CA HA1 PLM sing 334 n n 
CA HA2 PLM sing 335 n n 
CB CC PLM sing 336 n n 
CB HB1 PLM sing 337 n n 
CB HB2 PLM sing 338 n n 
CC CD PLM sing 339 n n 
CC HC1 PLM sing 340 n n 
CC HC2 PLM sing 341 n n 
CD CE PLM sing 342 n n 
CD HD1 PLM sing 343 n n 
CD HD2 PLM sing 344 n n 
CE CF PLM sing 345 n n 
CE HE1 PLM sing 346 n n 
CE HE2 PLM sing 347 n n 
CF CG PLM sing 348 n n 
CF HF1 PLM sing 349 n n 
CF HF2 PLM sing 350 n n 
CG HG1 PLM sing 351 n n 
CG HG2 PLM sing 352 n n 
CG HG3 PLM sing 353 n n 
#
_atom_sites.entry_id                     5GIX 
_atom_sites.fract_transf_matrix[1][1]    0.025993 
_atom_sites.fract_transf_matrix[1][2]    0.004989 
_atom_sites.fract_transf_matrix[1][3]    0.001304 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010769 
_atom_sites.fract_transf_matrix[2][3]    0.002917 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01078 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 6WF A 1 601 1 6WF LIG . 
D 3 PLM A 1 602 1 PLM PLM . 
E 3 PLM A 1 603 2 PLM PLM . 
F 3 PLM A 1 604 3 PLM PLM . 
G 3 PLM A 1 605 4 PLM PLM . 
H 3 PLM A 1 606 5 PLM PLM . 
I 3 PLM A 1 607 6 PLM PLM . 
J 2 6WF B 1 601 2 6WF LIG . 
K 3 PLM B 1 602 7 PLM PLM . 
L 3 PLM B 1 603 8 PLM PLM . 
M 3 PLM B 1 604 9 PLM PLM . 
N 3 PLM B 1 605 10 PLM PLM . 
O 3 PLM B 1 606 11 PLM PLM . 
P 3 PLM B 1 607 12 PLM PLM . 
Q 4 HOH A 1 701 1 HOH HOH . 
Q 4 HOH A 2 702 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . P 3 29.013 -48.292 20.012 1 93.36 ? C1 PLM 607 B 1 
HETATM 2 O O1 PLM . . . P 3 29.689 -47.349 19.516 1 91.4 ? O1 PLM 607 B 1 
HETATM 3 O O2 PLM . . . P 3 29.061 -49.445 19.504 1 89.72 ? O2 PLM 607 B 1 
HETATM 4 C C2 PLM . . . P 3 28.137 -48.053 21.223 1 92.82 ? C2 PLM 607 B 1 
HETATM 5 C C3 PLM . . . P 3 27.338 -46.77 21.129 1 87.51 ? C3 PLM 607 B 1 
HETATM 6 C C4 PLM . . . P 3 26.003 -46.97 20.444 1 80.99 ? C4 PLM 607 B 1 
HETATM 7 C C5 PLM . . . P 3 26.095 -46.767 18.948 1 72.94 ? C5 PLM 607 B 1 
HETATM 8 C C6 PLM . . . P 3 24.791 -47.051 18.233 1 63.73 ? C6 PLM 607 B 1 
HETATM 9 C C7 PLM . . . P 3 25.012 -47.409 16.778 1 54.94 ? C7 PLM 607 B 1 
HETATM 10 C C8 PLM . . . P 3 24.063 -46.678 15.854 1 51.69 ? C8 PLM 607 B 1 
HETATM 11 C C9 PLM . . . P 3 24.494 -45.248 15.606 1 51.35 ? C9 PLM 607 B 1 
HETATM 12 C CA PLM . . . P 3 23.352 -44.388 15.11 1 49.53 ? CA PLM 607 B 1 
HETATM 13 C CB PLM . . . P 3 23.721 -42.924 14.996 1 43.26 ? CB PLM 607 B 1 
HETATM 14 C CC PLM . . . P 3 22.501 -42.039 15.139 1 40.5 ? CC PLM 607 B 1 
HETATM 15 C CD PLM . . . P 3 22.696 -40.655 14.564 1 38.03 ? CD PLM 607 B 1 
HETATM 16 C CE PLM . . . P 3 21.556 -39.731 14.933 1 40.08 ? CE PLM 607 B 1 
HETATM 17 C CF PLM . . . P 3 21.091 -38.886 13.764 1 41.41 ? CF PLM 607 B 1 
HETATM 18 C CG PLM . . . P 3 19.711 -38.301 13.985 1 33.48 ? CG PLM 607 B 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           456 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           18 
#