data_5GLB # _model_server_result.job_id EHyQmdj-XXxGRtWvbxMExg _model_server_result.datetime_utc '2024-11-24 20:49:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5glb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5GLB # _exptl.entry_id 5GLB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 330.125 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5GLB _cell.length_a 70.059 _cell.length_b 92.881 _cell.length_c 34.993 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GLB _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H15 B N4 O6 S' _chem_comp.formula_weight 330.125 _chem_comp.id CB4 _chem_comp.mon_nstd_flag . _chem_comp.name PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag B OB1 CB4 sing 70 n n B OB2 CB4 sing 71 n n B C7 CB4 sing 72 n n OB1 HB1O CB4 sing 73 n n OB2 HB2O CB4 sing 74 n n C7 N10 CB4 sing 75 n n C7 HC71 CB4 sing 76 n n C7 HC72 CB4 sing 77 n n N10 C11 CB4 sing 78 n n N10 H10N CB4 sing 79 n n C11 O12 CB4 doub 80 n n C11 C13 CB4 sing 81 n n C13 N16 CB4 doub 82 z n C13 C14 CB4 sing 83 n n N16 O17 CB4 sing 84 n n O17 C18 CB4 sing 85 n n C18 C19 CB4 sing 86 n n C18 C20 CB4 sing 87 n n C18 C21 CB4 sing 88 n n C14 C15 CB4 doub 89 n y C14 N19 CB4 sing 90 n y C15 S16 CB4 sing 91 n y C15 H15C CB4 sing 92 n n S16 C17 CB4 sing 93 n y C17 N18 CB4 sing 94 n n C17 N19 CB4 doub 95 n y N18 H181 CB4 sing 96 n n N18 H182 CB4 sing 97 n n C19 H191 CB4 sing 98 n n C19 H192 CB4 sing 99 n n C19 H193 CB4 sing 100 n n C20 H201 CB4 sing 101 n n C20 H202 CB4 sing 102 n n C20 H203 CB4 sing 103 n n C21 O2A CB4 doub 104 n n C21 O2B CB4 sing 105 n n O2B H2BO CB4 sing 106 n n # _atom_sites.entry_id 5GLB _atom_sites.fract_transf_matrix[1][1] 0.014274 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010766 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028577 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CB4 A 1 401 1 CB4 CB4 . C 3 HOH A 1 501 150 HOH HOH . C 3 HOH A 2 502 32 HOH HOH . C 3 HOH A 3 503 151 HOH HOH . C 3 HOH A 4 504 138 HOH HOH . C 3 HOH A 5 505 158 HOH HOH . C 3 HOH A 6 506 11 HOH HOH . C 3 HOH A 7 507 214 HOH HOH . C 3 HOH A 8 508 157 HOH HOH . C 3 HOH A 9 509 165 HOH HOH . C 3 HOH A 10 510 103 HOH HOH . C 3 HOH A 11 511 129 HOH HOH . C 3 HOH A 12 512 72 HOH HOH . C 3 HOH A 13 513 108 HOH HOH . C 3 HOH A 14 514 174 HOH HOH . C 3 HOH A 15 515 205 HOH HOH . C 3 HOH A 16 516 181 HOH HOH . C 3 HOH A 17 517 117 HOH HOH . C 3 HOH A 18 518 251 HOH HOH . C 3 HOH A 19 519 239 HOH HOH . C 3 HOH A 20 520 36 HOH HOH . C 3 HOH A 21 521 9 HOH HOH . C 3 HOH A 22 522 197 HOH HOH . C 3 HOH A 23 523 144 HOH HOH . C 3 HOH A 24 524 128 HOH HOH . C 3 HOH A 25 525 132 HOH HOH . C 3 HOH A 26 526 163 HOH HOH . C 3 HOH A 27 527 94 HOH HOH . C 3 HOH A 28 528 70 HOH HOH . C 3 HOH A 29 529 44 HOH HOH . C 3 HOH A 30 530 33 HOH HOH . C 3 HOH A 31 531 80 HOH HOH . C 3 HOH A 32 532 25 HOH HOH . C 3 HOH A 33 533 23 HOH HOH . C 3 HOH A 34 534 186 HOH HOH . C 3 HOH A 35 535 221 HOH HOH . C 3 HOH A 36 536 78 HOH HOH . C 3 HOH A 37 537 89 HOH HOH . C 3 HOH A 38 538 81 HOH HOH . C 3 HOH A 39 539 95 HOH HOH . C 3 HOH A 40 540 62 HOH HOH . C 3 HOH A 41 541 54 HOH HOH . C 3 HOH A 42 542 201 HOH HOH . C 3 HOH A 43 543 142 HOH HOH . C 3 HOH A 44 544 76 HOH HOH . C 3 HOH A 45 545 145 HOH HOH . C 3 HOH A 46 546 189 HOH HOH . C 3 HOH A 47 547 7 HOH HOH . C 3 HOH A 48 548 114 HOH HOH . C 3 HOH A 49 549 30 HOH HOH . C 3 HOH A 50 550 118 HOH HOH . C 3 HOH A 51 551 252 HOH HOH . C 3 HOH A 52 552 85 HOH HOH . C 3 HOH A 53 553 125 HOH HOH . C 3 HOH A 54 554 134 HOH HOH . C 3 HOH A 55 555 111 HOH HOH . C 3 HOH A 56 556 215 HOH HOH . C 3 HOH A 57 557 1 HOH HOH . C 3 HOH A 58 558 130 HOH HOH . C 3 HOH A 59 559 15 HOH HOH . C 3 HOH A 60 560 187 HOH HOH . C 3 HOH A 61 561 97 HOH HOH . C 3 HOH A 62 562 16 HOH HOH . C 3 HOH A 63 563 173 HOH HOH . C 3 HOH A 64 564 3 HOH HOH . C 3 HOH A 65 565 93 HOH HOH . C 3 HOH A 66 566 35 HOH HOH . C 3 HOH A 67 567 47 HOH HOH . C 3 HOH A 68 568 255 HOH HOH . C 3 HOH A 69 569 63 HOH HOH . C 3 HOH A 70 570 29 HOH HOH . C 3 HOH A 71 571 127 HOH HOH . C 3 HOH A 72 572 6 HOH HOH . C 3 HOH A 73 573 122 HOH HOH . C 3 HOH A 74 574 83 HOH HOH . C 3 HOH A 75 575 204 HOH HOH . C 3 HOH A 76 576 176 HOH HOH . C 3 HOH A 77 577 178 HOH HOH . C 3 HOH A 78 578 206 HOH HOH . C 3 HOH A 79 579 104 HOH HOH . C 3 HOH A 80 580 115 HOH HOH . C 3 HOH A 81 581 24 HOH HOH . C 3 HOH A 82 582 56 HOH HOH . C 3 HOH A 83 583 223 HOH HOH . C 3 HOH A 84 584 49 HOH HOH . C 3 HOH A 85 585 209 HOH HOH . C 3 HOH A 86 586 55 HOH HOH . C 3 HOH A 87 587 120 HOH HOH . C 3 HOH A 88 588 51 HOH HOH . C 3 HOH A 89 589 59 HOH HOH . C 3 HOH A 90 590 2 HOH HOH . C 3 HOH A 91 591 107 HOH HOH . C 3 HOH A 92 592 169 HOH HOH . C 3 HOH A 93 593 10 HOH HOH . C 3 HOH A 94 594 135 HOH HOH . C 3 HOH A 95 595 152 HOH HOH . C 3 HOH A 96 596 46 HOH HOH . C 3 HOH A 97 597 159 HOH HOH . C 3 HOH A 98 598 237 HOH HOH . C 3 HOH A 99 599 65 HOH HOH . C 3 HOH A 100 600 77 HOH HOH . C 3 HOH A 101 601 27 HOH HOH . C 3 HOH A 102 602 42 HOH HOH . C 3 HOH A 103 603 166 HOH HOH . C 3 HOH A 104 604 21 HOH HOH . C 3 HOH A 105 605 182 HOH HOH . C 3 HOH A 106 606 19 HOH HOH . C 3 HOH A 107 607 20 HOH HOH . C 3 HOH A 108 608 99 HOH HOH . C 3 HOH A 109 609 139 HOH HOH . C 3 HOH A 110 610 196 HOH HOH . C 3 HOH A 111 611 123 HOH HOH . C 3 HOH A 112 612 8 HOH HOH . C 3 HOH A 113 613 12 HOH HOH . C 3 HOH A 114 614 37 HOH HOH . C 3 HOH A 115 615 79 HOH HOH . C 3 HOH A 116 616 170 HOH HOH . C 3 HOH A 117 617 38 HOH HOH . C 3 HOH A 118 618 188 HOH HOH . C 3 HOH A 119 619 17 HOH HOH . C 3 HOH A 120 620 225 HOH HOH . C 3 HOH A 121 621 18 HOH HOH . C 3 HOH A 122 622 82 HOH HOH . C 3 HOH A 123 623 58 HOH HOH . C 3 HOH A 124 624 110 HOH HOH . C 3 HOH A 125 625 183 HOH HOH . C 3 HOH A 126 626 146 HOH HOH . C 3 HOH A 127 627 74 HOH HOH . C 3 HOH A 128 628 101 HOH HOH . C 3 HOH A 129 629 137 HOH HOH . C 3 HOH A 130 630 66 HOH HOH . C 3 HOH A 131 631 140 HOH HOH . C 3 HOH A 132 632 230 HOH HOH . C 3 HOH A 133 633 109 HOH HOH . C 3 HOH A 134 634 243 HOH HOH . C 3 HOH A 135 635 167 HOH HOH . C 3 HOH A 136 636 88 HOH HOH . C 3 HOH A 137 637 75 HOH HOH . C 3 HOH A 138 638 168 HOH HOH . C 3 HOH A 139 639 91 HOH HOH . C 3 HOH A 140 640 34 HOH HOH . C 3 HOH A 141 641 22 HOH HOH . C 3 HOH A 142 642 172 HOH HOH . C 3 HOH A 143 643 5 HOH HOH . C 3 HOH A 144 644 199 HOH HOH . C 3 HOH A 145 645 203 HOH HOH . C 3 HOH A 146 646 48 HOH HOH . C 3 HOH A 147 647 87 HOH HOH . C 3 HOH A 148 648 248 HOH HOH . C 3 HOH A 149 649 141 HOH HOH . C 3 HOH A 150 650 86 HOH HOH . C 3 HOH A 151 651 126 HOH HOH . C 3 HOH A 152 652 180 HOH HOH . C 3 HOH A 153 653 147 HOH HOH . C 3 HOH A 154 654 124 HOH HOH . C 3 HOH A 155 655 52 HOH HOH . C 3 HOH A 156 656 13 HOH HOH . C 3 HOH A 157 657 160 HOH HOH . C 3 HOH A 158 658 253 HOH HOH . C 3 HOH A 159 659 26 HOH HOH . C 3 HOH A 160 660 195 HOH HOH . C 3 HOH A 161 661 53 HOH HOH . C 3 HOH A 162 662 39 HOH HOH . C 3 HOH A 163 663 177 HOH HOH . C 3 HOH A 164 664 161 HOH HOH . C 3 HOH A 165 665 31 HOH HOH . C 3 HOH A 166 666 226 HOH HOH . C 3 HOH A 167 667 45 HOH HOH . C 3 HOH A 168 668 175 HOH HOH . C 3 HOH A 169 669 43 HOH HOH . C 3 HOH A 170 670 50 HOH HOH . C 3 HOH A 171 671 64 HOH HOH . C 3 HOH A 172 672 184 HOH HOH . C 3 HOH A 173 673 61 HOH HOH . C 3 HOH A 174 674 148 HOH HOH . C 3 HOH A 175 675 245 HOH HOH . C 3 HOH A 176 676 162 HOH HOH . C 3 HOH A 177 677 40 HOH HOH . C 3 HOH A 178 678 154 HOH HOH . C 3 HOH A 179 679 164 HOH HOH . C 3 HOH A 180 680 231 HOH HOH . C 3 HOH A 181 681 121 HOH HOH . C 3 HOH A 182 682 202 HOH HOH . C 3 HOH A 183 683 218 HOH HOH . C 3 HOH A 184 684 41 HOH HOH . C 3 HOH A 185 685 73 HOH HOH . C 3 HOH A 186 686 131 HOH HOH . C 3 HOH A 187 687 106 HOH HOH . C 3 HOH A 188 688 102 HOH HOH . C 3 HOH A 189 689 238 HOH HOH . C 3 HOH A 190 690 57 HOH HOH . C 3 HOH A 191 691 217 HOH HOH . C 3 HOH A 192 692 229 HOH HOH . C 3 HOH A 193 693 4 HOH HOH . C 3 HOH A 194 694 222 HOH HOH . C 3 HOH A 195 695 220 HOH HOH . C 3 HOH A 196 696 67 HOH HOH . C 3 HOH A 197 697 216 HOH HOH . C 3 HOH A 198 698 224 HOH HOH . C 3 HOH A 199 699 100 HOH HOH . C 3 HOH A 200 700 210 HOH HOH . C 3 HOH A 201 701 213 HOH HOH . C 3 HOH A 202 702 244 HOH HOH . C 3 HOH A 203 703 254 HOH HOH . C 3 HOH A 204 704 28 HOH HOH . C 3 HOH A 205 705 211 HOH HOH . C 3 HOH A 206 706 113 HOH HOH . C 3 HOH A 207 707 153 HOH HOH . C 3 HOH A 208 708 90 HOH HOH . C 3 HOH A 209 709 240 HOH HOH . C 3 HOH A 210 710 171 HOH HOH . C 3 HOH A 211 711 98 HOH HOH . C 3 HOH A 212 712 179 HOH HOH . C 3 HOH A 213 713 68 HOH HOH . C 3 HOH A 214 714 232 HOH HOH . C 3 HOH A 215 715 155 HOH HOH . C 3 HOH A 216 716 136 HOH HOH . C 3 HOH A 217 717 71 HOH HOH . C 3 HOH A 218 718 116 HOH HOH . C 3 HOH A 219 719 242 HOH HOH . C 3 HOH A 220 720 191 HOH HOH . C 3 HOH A 221 721 207 HOH HOH . C 3 HOH A 222 722 234 HOH HOH . C 3 HOH A 223 723 60 HOH HOH . C 3 HOH A 224 724 247 HOH HOH . C 3 HOH A 225 725 246 HOH HOH . C 3 HOH A 226 726 192 HOH HOH . C 3 HOH A 227 727 198 HOH HOH . C 3 HOH A 228 728 250 HOH HOH . C 3 HOH A 229 729 84 HOH HOH . C 3 HOH A 230 730 233 HOH HOH . C 3 HOH A 231 731 219 HOH HOH . C 3 HOH A 232 732 193 HOH HOH . C 3 HOH A 233 733 185 HOH HOH . C 3 HOH A 234 734 69 HOH HOH . C 3 HOH A 235 735 92 HOH HOH . C 3 HOH A 236 736 241 HOH HOH . C 3 HOH A 237 737 133 HOH HOH . C 3 HOH A 238 738 149 HOH HOH . C 3 HOH A 239 739 194 HOH HOH . C 3 HOH A 240 740 208 HOH HOH . C 3 HOH A 241 741 105 HOH HOH . C 3 HOH A 242 742 227 HOH HOH . C 3 HOH A 243 743 249 HOH HOH . C 3 HOH A 244 744 14 HOH HOH . C 3 HOH A 245 745 143 HOH HOH . C 3 HOH A 246 746 119 HOH HOH . C 3 HOH A 247 747 112 HOH HOH . C 3 HOH A 248 748 96 HOH HOH . C 3 HOH A 249 749 156 HOH HOH . C 3 HOH A 250 750 212 HOH HOH . C 3 HOH A 251 751 190 HOH HOH . C 3 HOH A 252 752 200 HOH HOH . C 3 HOH A 253 753 235 HOH HOH . C 3 HOH A 254 754 228 HOH HOH . C 3 HOH A 255 755 236 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B CB4 . . . B 2 13.541 11.557 7.488 1 17.19 ? B CB4 401 A 1 HETATM 2 O OB1 CB4 . . . B 2 14.881 11.089 7.626 1 10.16 ? OB1 CB4 401 A 1 HETATM 3 O OB2 CB4 . . . B 2 12.482 10.555 7.459 1 23.69 ? OB2 CB4 401 A 1 HETATM 4 C C7 CB4 . . . B 2 13.325 12.742 6.36 1 14.04 ? C7 CB4 401 A 1 HETATM 5 N N10 CB4 . . . B 2 12.461 11.989 5.571 1 17.24 ? N10 CB4 401 A 1 HETATM 6 C C11 CB4 . . . B 2 12.04 12.443 4.335 1 17.23 ? C11 CB4 401 A 1 HETATM 7 O O12 CB4 . . . B 2 12.41 13.529 3.915 1 17.7 ? O12 CB4 401 A 1 HETATM 8 C C13 CB4 . . . B 2 11.156 11.456 3.696 1 21 ? C13 CB4 401 A 1 HETATM 9 N N16 CB4 . . . B 2 10.707 10.448 4.39 1 26.48 ? N16 CB4 401 A 1 HETATM 10 O O17 CB4 . . . B 2 10.934 9.242 3.954 1 36.77 ? O17 CB4 401 A 1 HETATM 11 C C18 CB4 . . . B 2 10.097 8.178 4.245 1 35.91 ? C18 CB4 401 A 1 HETATM 12 C C14 CB4 . . . B 2 10.717 11.633 2.317 1 18.33 ? C14 CB4 401 A 1 HETATM 13 C C15 CB4 . . . B 2 11.18 12.676 1.507 1 20.48 ? C15 CB4 401 A 1 HETATM 14 S S16 CB4 . . . B 2 10.326 12.419 0.074 1 18.33 ? S16 CB4 401 A 1 HETATM 15 C C17 CB4 . . . B 2 9.46 11.035 0.508 1 18.13 ? C17 CB4 401 A 1 HETATM 16 N N18 CB4 . . . B 2 8.531 10.285 -0.273 1 22.44 ? N18 CB4 401 A 1 HETATM 17 N N19 CB4 . . . B 2 9.802 10.77 1.774 1 22.86 ? N19 CB4 401 A 1 HETATM 18 C C19 CB4 . . . B 2 9.145 7.956 3.116 1 32.13 ? C19 CB4 401 A 1 HETATM 19 C C20 CB4 . . . B 2 10.924 6.946 4.406 1 32.07 ? C20 CB4 401 A 1 HETATM 20 C C21 CB4 . . . B 2 9.31 8.405 5.499 1 31.16 ? C21 CB4 401 A 1 HETATM 21 O O2A CB4 . . . B 2 8.317 9.18 5.487 1 35.22 ? O2A CB4 401 A 1 HETATM 22 O O2B CB4 . . . B 2 9.628 7.817 6.572 1 36.65 ? O2B CB4 401 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #