data_5GMU # _model_server_result.job_id lJBe7NJKG2nFUYu0Su6_Ag _model_server_result.datetime_utc '2024-11-23 17:17:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5gmu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 5GMU # _exptl.entry_id 5GMU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.325 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R,3R,4S,5R)-3-[3-[3,4-bis(oxidanyl)phenyl]propanoyloxy]-1,4,5-tris(oxidanyl)cyclohexane-1-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.23 _cell.angle_gamma 90 _cell.entry_id 5GMU _cell.length_a 35.685 _cell.length_b 47.049 _cell.length_c 56.797 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GMU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C16 H20 O9' _chem_comp.formula_weight 356.325 _chem_comp.id 7LH _chem_comp.mon_nstd_flag . _chem_comp.name '(1R,3R,4S,5R)-3-[3-[3,4-bis(oxidanyl)phenyl]propanoyloxy]-1,4,5-tris(oxidanyl)cyclohexane-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAH CAG 7LH sing 1 n n OAJ CAI 7LH sing 2 n n CAI CAG 7LH sing 3 n n CAI CAK 7LH sing 4 n n CAG CAF 7LH sing 5 n n CAF CAD 7LH sing 6 n n CAK OAL 7LH sing 7 n n CAK CAY 7LH sing 8 n n OAL CAM 7LH sing 9 n n CAY CAD 7LH sing 10 n n CAD OAE 7LH sing 11 n n CAD CAB 7LH sing 12 n n CAM CAO 7LH sing 13 n n CAM OAN 7LH doub 14 n n OAC CAB 7LH doub 15 n n CAO CAP 7LH sing 16 n n CAB OAA 7LH sing 17 n n OAW CAV 7LH sing 18 n n CAX CAV 7LH doub 19 n y CAX CAQ 7LH sing 20 n y CAP CAQ 7LH sing 21 n n CAV CAT 7LH sing 22 n y CAQ CAR 7LH doub 23 n y CAT OAU 7LH sing 24 n n CAT CAS 7LH doub 25 n y CAR CAS 7LH sing 26 n y CAX H1 7LH sing 27 n n OAW H2 7LH sing 28 n n OAU H3 7LH sing 29 n n CAS H4 7LH sing 30 n n CAR H5 7LH sing 31 n n CAP H6 7LH sing 32 n n CAP H7 7LH sing 33 n n CAO H8 7LH sing 34 n n CAO H9 7LH sing 35 n n CAK H10 7LH sing 36 n n CAY H11 7LH sing 37 n n CAY H12 7LH sing 38 n n OAA H13 7LH sing 39 n n OAE H14 7LH sing 40 n n CAF H15 7LH sing 41 n n CAF H16 7LH sing 42 n n CAG H17 7LH sing 43 n n OAH H18 7LH sing 44 n n CAI H19 7LH sing 45 n n OAJ H20 7LH sing 46 n n # _atom_sites.entry_id 5GMU _atom_sites.fract_transf_matrix[1][1] 0.028023 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008692 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021254 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018434 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 7LH A 1 101 1 7LH DRG . D 3 SO4 A 1 102 501 SO4 SO4 . E 2 7LH B 1 101 2 7LH DRG . F 4 HOH A 1 201 13 HOH HOH . F 4 HOH A 2 202 128 HOH HOH . F 4 HOH A 3 203 141 HOH HOH . F 4 HOH A 4 204 26 HOH HOH . F 4 HOH A 5 205 114 HOH HOH . F 4 HOH A 6 206 41 HOH HOH . F 4 HOH A 7 207 103 HOH HOH . F 4 HOH A 8 208 20 HOH HOH . F 4 HOH A 9 209 154 HOH HOH . F 4 HOH A 10 210 64 HOH HOH . F 4 HOH A 11 211 14 HOH HOH . F 4 HOH A 12 212 125 HOH HOH . F 4 HOH A 13 213 37 HOH HOH . F 4 HOH A 14 214 42 HOH HOH . F 4 HOH A 15 215 35 HOH HOH . F 4 HOH A 16 216 44 HOH HOH . F 4 HOH A 17 217 134 HOH HOH . F 4 HOH A 18 218 38 HOH HOH . F 4 HOH A 19 219 36 HOH HOH . F 4 HOH A 20 220 98 HOH HOH . F 4 HOH A 21 221 57 HOH HOH . F 4 HOH A 22 222 110 HOH HOH . F 4 HOH A 23 223 28 HOH HOH . F 4 HOH A 24 224 11 HOH HOH . F 4 HOH A 25 225 101 HOH HOH . F 4 HOH A 26 226 94 HOH HOH . F 4 HOH A 27 227 61 HOH HOH . F 4 HOH A 28 228 149 HOH HOH . F 4 HOH A 29 229 102 HOH HOH . F 4 HOH A 30 230 2 HOH HOH . F 4 HOH A 31 231 92 HOH HOH . F 4 HOH A 32 232 51 HOH HOH . F 4 HOH A 33 233 108 HOH HOH . F 4 HOH A 34 234 148 HOH HOH . F 4 HOH A 35 235 67 HOH HOH . F 4 HOH A 36 236 5 HOH HOH . F 4 HOH A 37 237 32 HOH HOH . F 4 HOH A 38 238 17 HOH HOH . F 4 HOH A 39 239 40 HOH HOH . F 4 HOH A 40 240 58 HOH HOH . F 4 HOH A 41 241 7 HOH HOH . F 4 HOH A 42 242 152 HOH HOH . F 4 HOH A 43 243 70 HOH HOH . F 4 HOH A 44 244 142 HOH HOH . F 4 HOH A 45 245 76 HOH HOH . F 4 HOH A 46 246 126 HOH HOH . F 4 HOH A 47 247 130 HOH HOH . F 4 HOH A 48 248 85 HOH HOH . F 4 HOH A 49 249 109 HOH HOH . F 4 HOH A 50 250 117 HOH HOH . F 4 HOH A 51 251 133 HOH HOH . F 4 HOH A 52 252 118 HOH HOH . F 4 HOH A 53 253 88 HOH HOH . F 4 HOH A 54 254 79 HOH HOH . F 4 HOH A 55 255 132 HOH HOH . F 4 HOH A 56 256 116 HOH HOH . F 4 HOH A 57 257 55 HOH HOH . G 4 HOH B 1 201 120 HOH HOH . G 4 HOH B 2 202 47 HOH HOH . G 4 HOH B 3 203 124 HOH HOH . G 4 HOH B 4 204 6 HOH HOH . G 4 HOH B 5 205 52 HOH HOH . G 4 HOH B 6 206 153 HOH HOH . G 4 HOH B 7 207 144 HOH HOH . G 4 HOH B 8 208 86 HOH HOH . G 4 HOH B 9 209 73 HOH HOH . G 4 HOH B 10 210 107 HOH HOH . G 4 HOH B 11 211 27 HOH HOH . G 4 HOH B 12 212 18 HOH HOH . G 4 HOH B 13 213 24 HOH HOH . G 4 HOH B 14 214 34 HOH HOH . G 4 HOH B 15 215 46 HOH HOH . G 4 HOH B 16 216 140 HOH HOH . G 4 HOH B 17 217 9 HOH HOH . G 4 HOH B 18 218 77 HOH HOH . G 4 HOH B 19 219 65 HOH HOH . G 4 HOH B 20 220 135 HOH HOH . G 4 HOH B 21 221 145 HOH HOH . G 4 HOH B 22 222 50 HOH HOH . G 4 HOH B 23 223 29 HOH HOH . G 4 HOH B 24 224 21 HOH HOH . G 4 HOH B 25 225 19 HOH HOH . G 4 HOH B 26 226 123 HOH HOH . G 4 HOH B 27 227 15 HOH HOH . G 4 HOH B 28 228 69 HOH HOH . G 4 HOH B 29 229 3 HOH HOH . G 4 HOH B 30 230 137 HOH HOH . G 4 HOH B 31 231 10 HOH HOH . G 4 HOH B 32 232 31 HOH HOH . G 4 HOH B 33 233 22 HOH HOH . G 4 HOH B 34 234 111 HOH HOH . G 4 HOH B 35 235 4 HOH HOH . G 4 HOH B 36 236 82 HOH HOH . G 4 HOH B 37 237 30 HOH HOH . G 4 HOH B 38 238 49 HOH HOH . G 4 HOH B 39 239 127 HOH HOH . G 4 HOH B 40 240 72 HOH HOH . G 4 HOH B 41 241 115 HOH HOH . G 4 HOH B 42 242 33 HOH HOH . G 4 HOH B 43 243 84 HOH HOH . G 4 HOH B 44 244 12 HOH HOH . G 4 HOH B 45 245 151 HOH HOH . G 4 HOH B 46 246 150 HOH HOH . G 4 HOH B 47 247 143 HOH HOH . G 4 HOH B 48 248 139 HOH HOH . G 4 HOH B 49 249 129 HOH HOH . G 4 HOH B 50 250 146 HOH HOH . G 4 HOH B 51 251 99 HOH HOH . G 4 HOH B 52 252 131 HOH HOH . G 4 HOH B 53 253 112 HOH HOH . G 4 HOH B 54 254 97 HOH HOH . G 4 HOH B 55 255 96 HOH HOH . G 4 HOH B 56 256 89 HOH HOH . G 4 HOH B 57 257 48 HOH HOH . G 4 HOH B 58 258 8 HOH HOH . G 4 HOH B 59 259 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAX 7LH . . . E 2 7.315 9.08 27.764 1 29.69 ? CAX 7LH 101 B 1 HETATM 2 C CAV 7LH . . . E 2 7.135 10.317 27.12 1 30.67 ? CAV 7LH 101 B 1 HETATM 3 O OAW 7LH . . . E 2 6.146 11.216 27.558 1 35.31 ? OAW 7LH 101 B 1 HETATM 4 C CAT 7LH . . . E 2 7.95 10.678 26.037 1 36.58 ? CAT 7LH 101 B 1 HETATM 5 O OAU 7LH . . . E 2 7.786 11.913 25.394 1 39.66 ? OAU 7LH 101 B 1 HETATM 6 C CAS 7LH . . . E 2 8.933 9.817 25.563 1 34.31 ? CAS 7LH 101 B 1 HETATM 7 C CAR 7LH . . . E 2 9.107 8.582 26.188 1 40.2 ? CAR 7LH 101 B 1 HETATM 8 C CAQ 7LH . . . E 2 8.306 8.211 27.283 1 29.1 ? CAQ 7LH 101 B 1 HETATM 9 C CAP 7LH . . . E 2 8.631 6.842 27.847 1 29.61 ? CAP 7LH 101 B 1 HETATM 10 C CAO 7LH . . . E 2 7.82 6.448 29.056 1 25.09 ? CAO 7LH 101 B 1 HETATM 11 C CAM 7LH . . . E 2 8.315 5.121 29.564 1 25.56 ? CAM 7LH 101 B 1 HETATM 12 O OAN 7LH . . . E 2 9.134 4.421 29.021 1 27 ? OAN 7LH 101 B 1 HETATM 13 O OAL 7LH . . . E 2 7.739 4.759 30.771 1 26.87 ? OAL 7LH 101 B 1 HETATM 14 C CAK 7LH . . . E 2 7.976 3.483 31.302 1 25.47 ? CAK 7LH 101 B 1 HETATM 15 C CAY 7LH . . . E 2 7.28 2.463 30.369 1 23.45 ? CAY 7LH 101 B 1 HETATM 16 C CAD 7LH . . . E 2 5.772 2.542 30.419 1 22.73 ? CAD 7LH 101 B 1 HETATM 17 C CAB 7LH . . . E 2 5.295 1.377 29.553 1 19.44 ? CAB 7LH 101 B 1 HETATM 18 O OAC 7LH . . . E 2 4.252 1.657 28.718 1 24.18 ? OAC 7LH 101 B 1 HETATM 19 O OAA 7LH . . . E 2 5.541 0.099 29.97 1 23.03 ? OAA 7LH 101 B 1 HETATM 20 O OAE 7LH . . . E 2 5.299 3.694 29.787 1 29.05 ? OAE 7LH 101 B 1 HETATM 21 C CAF 7LH . . . E 2 5.215 2.501 31.871 1 26.6 ? CAF 7LH 101 B 1 HETATM 22 C CAG 7LH . . . E 2 5.834 3.672 32.67 1 33.21 ? CAG 7LH 101 B 1 HETATM 23 O OAH 7LH . . . E 2 5.368 3.648 33.997 1 31.34 ? OAH 7LH 101 B 1 HETATM 24 C CAI 7LH . . . E 2 7.359 3.522 32.706 1 28.79 ? CAI 7LH 101 B 1 HETATM 25 O OAJ 7LH . . . E 2 7.933 4.616 33.396 1 29.98 ? OAJ 7LH 101 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #