data_5GN0
#
_model_server_result.job_id            D1K39K1Nkg7EuiSF0ehQEQ 
_model_server_result.datetime_utc      '2024-10-18 16:22:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5gn0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":502}' 
#
_entry.id    5GN0 
#
_exptl.entry_id    5GN0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5GN0 
_cell.length_a            79.66 
_cell.length_b            120.9 
_cell.length_c            196.58 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5GN0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
? dimeric 2 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,N 1 1 
B,G,I,J,O 2 1 
C,F,K,L,P,R 3 1 
D,H,M,Q 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 L N N 
? 4 M N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            D 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             158 
_struct_conn.ptnr1_auth_asym_id             D 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              360 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            M 
_struct_conn.ptnr2_label_atom_id            C1 
_struct_conn.ptnr2_label_comp_id            PLM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             D 
_struct_conn.ptnr2_auth_comp_id             PLM 
_struct_conn.ptnr2_auth_seq_id              501 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.28 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 280 n n 
C1 O2 PLM doub 281 n n 
C1 C2 PLM sing 282 n n 
O1 H PLM sing 283 n n 
C2 C3 PLM sing 284 n n 
C2 H21 PLM sing 285 n n 
C2 H22 PLM sing 286 n n 
C3 C4 PLM sing 287 n n 
C3 H31 PLM sing 288 n n 
C3 H32 PLM sing 289 n n 
C4 C5 PLM sing 290 n n 
C4 H41 PLM sing 291 n n 
C4 H42 PLM sing 292 n n 
C5 C6 PLM sing 293 n n 
C5 H51 PLM sing 294 n n 
C5 H52 PLM sing 295 n n 
C6 C7 PLM sing 296 n n 
C6 H61 PLM sing 297 n n 
C6 H62 PLM sing 298 n n 
C7 C8 PLM sing 299 n n 
C7 H71 PLM sing 300 n n 
C7 H72 PLM sing 301 n n 
C8 C9 PLM sing 302 n n 
C8 H81 PLM sing 303 n n 
C8 H82 PLM sing 304 n n 
C9 CA PLM sing 305 n n 
C9 H91 PLM sing 306 n n 
C9 H92 PLM sing 307 n n 
CA CB PLM sing 308 n n 
CA HA1 PLM sing 309 n n 
CA HA2 PLM sing 310 n n 
CB CC PLM sing 311 n n 
CB HB1 PLM sing 312 n n 
CB HB2 PLM sing 313 n n 
CC CD PLM sing 314 n n 
CC HC1 PLM sing 315 n n 
CC HC2 PLM sing 316 n n 
CD CE PLM sing 317 n n 
CD HD1 PLM sing 318 n n 
CD HD2 PLM sing 319 n n 
CE CF PLM sing 320 n n 
CE HE1 PLM sing 321 n n 
CE HE2 PLM sing 322 n n 
CF CG PLM sing 323 n n 
CF HF1 PLM sing 324 n n 
CF HF2 PLM sing 325 n n 
CG HG1 PLM sing 326 n n 
CG HG2 PLM sing 327 n n 
CG HG3 PLM sing 328 n n 
#
_atom_sites.entry_id                     5GN0 
_atom_sites.fract_transf_matrix[1][1]    0.012553 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008271 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005087 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 CIT B 1 501 2 CIT CIT . 
J 4 PLM B 1 502 1 PLM PLM . 
K 3 CIT C 1 501 1 CIT CIT . 
L 4 PLM C 1 502 3 PLM PLM . 
M 4 PLM D 1 501 4 PLM PLM . 
N 5 HOH A 1 501 101 HOH HOH . 
N 5 HOH A 2 502 116 HOH HOH . 
N 5 HOH A 3 503 132 HOH HOH . 
N 5 HOH A 4 504 11 HOH HOH . 
N 5 HOH A 5 505 12 HOH HOH . 
O 5 HOH B 1 601 14 HOH HOH . 
O 5 HOH B 2 602 51 HOH HOH . 
O 5 HOH B 3 603 165 HOH HOH . 
O 5 HOH B 4 604 57 HOH HOH . 
O 5 HOH B 5 605 88 HOH HOH . 
O 5 HOH B 6 606 145 HOH HOH . 
O 5 HOH B 7 607 5 HOH HOH . 
P 5 HOH C 1 601 46 HOH HOH . 
P 5 HOH C 2 602 124 HOH HOH . 
P 5 HOH C 3 603 35 HOH HOH . 
P 5 HOH C 4 604 15 HOH HOH . 
Q 5 HOH D 1 601 1 HOH HOH . 
Q 5 HOH D 2 602 40 HOH HOH . 
R 5 HOH F 1 101 134 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . J 4 23.819 35.96 96.976 1 89.98 ? C1 PLM 502 B 1 
HETATM 2 O O1 PLM . . . J 4 24.07 36.497 98.066 1 81.78 ? O1 PLM 502 B 1 
HETATM 3 O O2 PLM . . . J 4 24.015 36.548 95.91 1 94.93 ? O2 PLM 502 B 1 
HETATM 4 C C2 PLM . . . J 4 22.863 34.808 96.924 1 87.8 ? C2 PLM 502 B 1 
HETATM 5 C C3 PLM . . . J 4 21.455 35.363 96.779 1 85.78 ? C3 PLM 502 B 1 
HETATM 6 C C4 PLM . . . J 4 20.721 35.307 98.107 1 81.38 ? C4 PLM 502 B 1 
HETATM 7 C C5 PLM . . . J 4 19.231 35.48 97.935 1 71.72 ? C5 PLM 502 B 1 
HETATM 8 C C6 PLM . . . J 4 18.943 36.95 98.045 1 65.51 ? C6 PLM 502 B 1 
HETATM 9 C C7 PLM . . . J 4 17.455 37.143 98.135 1 61.15 ? C7 PLM 502 B 1 
HETATM 10 C C8 PLM . . . J 4 17.146 38.18 99.175 1 58.19 ? C8 PLM 502 B 1 
HETATM 11 C C9 PLM . . . J 4 16.652 39.416 98.5 1 56.89 ? C9 PLM 502 B 1 
HETATM 12 C CA PLM . . . J 4 17.609 40.518 98.823 1 56.09 ? CA PLM 502 B 1 
HETATM 13 C CB PLM . . . J 4 16.957 41.808 98.403 1 61.28 ? CB PLM 502 B 1 
HETATM 14 C CC PLM . . . J 4 16.91 41.891 96.885 1 63.81 ? CC PLM 502 B 1 
HETATM 15 C CD PLM . . . J 4 16.687 43.308 96.398 1 62.18 ? CD PLM 502 B 1 
HETATM 16 C CE PLM . . . J 4 16.126 44.198 97.477 1 60.18 ? CE PLM 502 B 1 
HETATM 17 C CF PLM . . . J 4 15.234 45.209 96.822 1 58.05 ? CF PLM 502 B 1 
HETATM 18 C CG PLM . . . J 4 14.301 44.479 95.925 1 58.79 ? CG PLM 502 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           18 
#