data_5GQM # _model_server_result.job_id fewGn_m9YwfeHX_3Mh27Uw _model_server_result.datetime_utc '2024-12-26 12:16:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5gqm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5GQM # _exptl.entry_id 5GQM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5GQM _cell.length_a 103.42 _cell.length_b 103.42 _cell.length_c 103.42 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GQM _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 1 1_555 A N ALA 2 A ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? metalc ? metalc1 C MG MG . A MG 302 1_555 G O3G CTP . A CTP 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc2 C MG MG . A MG 302 1_555 G O2A CTP . A CTP 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc3 C MG MG . A MG 302 1_555 G O2B CTP . A CTP 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc4 C MG MG . A MG 302 1_555 H O HOH . A HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc5 C MG MG . A MG 302 1_555 H O HOH . A HOH 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc6 C MG MG . A MG 302 1_555 H O HOH . A HOH 496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc7 D MG MG . A MG 303 1_555 F O2A ATP . A ATP 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc8 D MG MG . A MG 303 1_555 F O2B ATP . A ATP 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc9 D MG MG . A MG 303 1_555 F O2G ATP . A ATP 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc10 D MG MG . A MG 303 1_555 H O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc11 D MG MG . A MG 303 1_555 H O HOH . A HOH 409 18_544 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? metalc ? metalc12 D MG MG . A MG 303 1_555 H O HOH . A HOH 446 18_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5GQM _atom_sites.fract_transf_matrix[1][1] 0.009669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009669 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009669 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 301 301 CL CL . C 3 MG A 1 302 302 MG MG . D 3 MG A 1 303 303 MG MG . E 4 GTP A 1 304 304 GTP GTP . F 5 ATP A 1 305 305 ATP ATP . G 6 CTP A 1 306 306 CTP CTP . H 7 HOH A 1 401 402 HOH HOH . H 7 HOH A 2 402 401 HOH HOH . H 7 HOH A 3 403 403 HOH HOH . H 7 HOH A 4 404 404 HOH HOH . H 7 HOH A 5 405 406 HOH HOH . H 7 HOH A 6 406 409 HOH HOH . H 7 HOH A 7 407 407 HOH HOH . H 7 HOH A 8 408 408 HOH HOH . H 7 HOH A 9 409 405 HOH HOH . H 7 HOH A 10 410 411 HOH HOH . H 7 HOH A 11 411 410 HOH HOH . H 7 HOH A 12 412 416 HOH HOH . H 7 HOH A 13 413 413 HOH HOH . H 7 HOH A 14 414 415 HOH HOH . H 7 HOH A 15 415 412 HOH HOH . H 7 HOH A 16 416 414 HOH HOH . H 7 HOH A 17 417 417 HOH HOH . H 7 HOH A 18 418 418 HOH HOH . H 7 HOH A 19 419 427 HOH HOH . H 7 HOH A 20 420 419 HOH HOH . H 7 HOH A 21 421 420 HOH HOH . H 7 HOH A 22 422 422 HOH HOH . H 7 HOH A 23 423 425 HOH HOH . H 7 HOH A 24 424 455 HOH HOH . H 7 HOH A 25 425 428 HOH HOH . H 7 HOH A 26 426 421 HOH HOH . H 7 HOH A 27 427 431 HOH HOH . H 7 HOH A 28 428 429 HOH HOH . H 7 HOH A 29 429 432 HOH HOH . H 7 HOH A 30 430 434 HOH HOH . H 7 HOH A 31 431 423 HOH HOH . H 7 HOH A 32 432 437 HOH HOH . H 7 HOH A 33 433 426 HOH HOH . H 7 HOH A 34 434 430 HOH HOH . H 7 HOH A 35 435 439 HOH HOH . H 7 HOH A 36 436 436 HOH HOH . H 7 HOH A 37 437 440 HOH HOH . H 7 HOH A 38 438 438 HOH HOH . H 7 HOH A 39 439 435 HOH HOH . H 7 HOH A 40 440 433 HOH HOH . H 7 HOH A 41 441 448 HOH HOH . H 7 HOH A 42 442 442 HOH HOH . H 7 HOH A 43 443 444 HOH HOH . H 7 HOH A 44 444 441 HOH HOH . H 7 HOH A 45 445 445 HOH HOH . H 7 HOH A 46 446 424 HOH HOH . H 7 HOH A 47 447 446 HOH HOH . H 7 HOH A 48 448 450 HOH HOH . H 7 HOH A 49 449 464 HOH HOH . H 7 HOH A 50 450 447 HOH HOH . H 7 HOH A 51 451 443 HOH HOH . H 7 HOH A 52 452 451 HOH HOH . H 7 HOH A 53 453 453 HOH HOH . H 7 HOH A 54 454 452 HOH HOH . H 7 HOH A 55 455 449 HOH HOH . H 7 HOH A 56 456 456 HOH HOH . H 7 HOH A 57 457 465 HOH HOH . H 7 HOH A 58 458 458 HOH HOH . H 7 HOH A 59 459 454 HOH HOH . H 7 HOH A 60 460 457 HOH HOH . H 7 HOH A 61 461 459 HOH HOH . H 7 HOH A 62 462 460 HOH HOH . H 7 HOH A 63 463 462 HOH HOH . H 7 HOH A 64 464 463 HOH HOH . H 7 HOH A 65 465 466 HOH HOH . H 7 HOH A 66 466 468 HOH HOH . H 7 HOH A 67 467 470 HOH HOH . H 7 HOH A 68 468 469 HOH HOH . H 7 HOH A 69 469 472 HOH HOH . H 7 HOH A 70 470 461 HOH HOH . H 7 HOH A 71 471 475 HOH HOH . H 7 HOH A 72 472 467 HOH HOH . H 7 HOH A 73 473 471 HOH HOH . H 7 HOH A 74 474 474 HOH HOH . H 7 HOH A 75 475 476 HOH HOH . H 7 HOH A 76 476 473 HOH HOH . H 7 HOH A 77 477 487 HOH HOH . H 7 HOH A 78 478 482 HOH HOH . H 7 HOH A 79 479 481 HOH HOH . H 7 HOH A 80 480 477 HOH HOH . H 7 HOH A 81 481 480 HOH HOH . H 7 HOH A 82 482 479 HOH HOH . H 7 HOH A 83 483 478 HOH HOH . H 7 HOH A 84 484 483 HOH HOH . H 7 HOH A 85 485 490 HOH HOH . H 7 HOH A 86 486 486 HOH HOH . H 7 HOH A 87 487 485 HOH HOH . H 7 HOH A 88 488 484 HOH HOH . H 7 HOH A 89 489 488 HOH HOH . H 7 HOH A 90 490 489 HOH HOH . H 7 HOH A 91 491 491 HOH HOH . H 7 HOH A 92 492 510 HOH HOH . H 7 HOH A 93 493 492 HOH HOH . H 7 HOH A 94 494 493 HOH HOH . H 7 HOH A 95 495 494 HOH HOH . H 7 HOH A 96 496 501 HOH HOH . H 7 HOH A 97 497 497 HOH HOH . H 7 HOH A 98 498 499 HOH HOH . H 7 HOH A 99 499 500 HOH HOH . H 7 HOH A 100 500 498 HOH HOH . H 7 HOH A 101 501 496 HOH HOH . H 7 HOH A 102 502 502 HOH HOH . H 7 HOH A 103 503 504 HOH HOH . H 7 HOH A 104 504 503 HOH HOH . H 7 HOH A 105 505 495 HOH HOH . H 7 HOH A 106 506 506 HOH HOH . H 7 HOH A 107 507 509 HOH HOH . H 7 HOH A 108 508 512 HOH HOH . H 7 HOH A 109 509 507 HOH HOH . H 7 HOH A 110 510 508 HOH HOH . H 7 HOH A 111 511 505 HOH HOH . H 7 HOH A 112 512 514 HOH HOH . H 7 HOH A 113 513 513 HOH HOH . H 7 HOH A 114 514 511 HOH HOH . H 7 HOH A 115 515 515 HOH HOH . H 7 HOH A 116 516 517 HOH HOH . H 7 HOH A 117 517 516 HOH HOH . H 7 HOH A 118 518 521 HOH HOH . H 7 HOH A 119 519 522 HOH HOH . H 7 HOH A 120 520 518 HOH HOH . H 7 HOH A 121 521 519 HOH HOH . H 7 HOH A 122 522 520 HOH HOH . H 7 HOH A 123 523 523 HOH HOH . H 7 HOH A 124 524 526 HOH HOH . H 7 HOH A 125 525 524 HOH HOH . H 7 HOH A 126 526 525 HOH HOH . H 7 HOH A 127 527 538 HOH HOH . H 7 HOH A 128 528 529 HOH HOH . H 7 HOH A 129 529 530 HOH HOH . H 7 HOH A 130 530 531 HOH HOH . H 7 HOH A 131 531 527 HOH HOH . H 7 HOH A 132 532 528 HOH HOH . H 7 HOH A 133 533 532 HOH HOH . H 7 HOH A 134 534 534 HOH HOH . H 7 HOH A 135 535 535 HOH HOH . H 7 HOH A 136 536 533 HOH HOH . H 7 HOH A 137 537 536 HOH HOH . H 7 HOH A 138 538 537 HOH HOH . H 7 HOH A 139 539 539 HOH HOH . H 7 HOH A 140 540 542 HOH HOH . H 7 HOH A 141 541 540 HOH HOH . H 7 HOH A 142 542 541 HOH HOH . H 7 HOH A 143 543 543 HOH HOH . H 7 HOH A 144 544 544 HOH HOH . H 7 HOH A 145 545 546 HOH HOH . H 7 HOH A 146 546 545 HOH HOH . H 7 HOH A 147 547 547 HOH HOH . H 7 HOH A 148 548 548 HOH HOH . H 7 HOH A 149 549 549 HOH HOH . H 7 HOH A 150 550 550 HOH HOH . H 7 HOH A 151 551 551 HOH HOH . H 7 HOH A 152 552 552 HOH HOH . H 7 HOH A 153 553 553 HOH HOH . H 7 HOH A 154 554 554 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -17.445 _atom_site.Cartn_y -42.438 _atom_site.Cartn_z -38.526 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.09 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #