data_5GSK
#
_model_server_result.job_id            pV00D-vVQnczUDcLyQKO7A 
_model_server_result.datetime_utc      '2024-10-18 12:21:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5gsk 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":101}' 
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_entry.id    5GSK 
#
_exptl.entry_id    5GSK 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              200.59 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MERCURY (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5GSK 
_cell.length_a            40.318 
_cell.length_b            40.318 
_cell.length_c            24.98 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5GSK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A N3 DT 3 A DT 3 7_555 B HG HG . A HG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc2 A N3 DT 3 A DT 3 1_555 B HG HG . A HG 101 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc3 A N3 DT 6 A DT 6 1_555 B HG HG . A HG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc4 A N3 DT 6 A DT 6 7_555 B HG HG . A HG 101 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 10.309 ? 
hydrog WATSON-CRICK hydrog1 A N1 DG 1 A DG 1 1_555 A N3 DC 8 A DC 8 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N2 DG 1 A DG 1 1_555 A O2 DC 8 A DC 8 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O6 DG 1 A DG 1 1_555 A N4 DC 8 A DC 8 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 A N3 DC 7 A DC 7 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 A O2 DC 7 A DC 7 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 A N4 DC 7 A DC 7 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N3 DC 4 A DC 4 1_555 A N1 DG 5 A DG 5 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N4 DC 4 A DC 4 1_555 A O6 DG 5 A DG 5 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A O2 DC 4 A DC 4 1_555 A N2 DG 5 A DG 5 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N1 DG 5 A DG 5 1_555 A N3 DC 4 A DC 4 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N2 DG 5 A DG 5 1_555 A O2 DC 4 A DC 4 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A O6 DG 5 A DG 5 1_555 A N4 DC 4 A DC 4 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N3 DC 7 A DC 7 1_555 A N1 DG 2 A DG 2 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A N4 DC 7 A DC 7 1_555 A O6 DG 2 A DG 2 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A O2 DC 7 A DC 7 1_555 A N2 DG 2 A DG 2 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A N3 DC 8 A DC 8 1_555 A N1 DG 1 A DG 1 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 A N4 DC 8 A DC 8 1_555 A O6 DG 1 A DG 1 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 A O2 DC 8 A DC 8 1_555 A N2 DG 1 A DG 1 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Hg 2' 
_chem_comp.formula_weight    200.59 
_chem_comp.id                HG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MERCURY (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5GSK 
_atom_sites.fract_transf_matrix[1][1]    0.024803 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024803 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.040032 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HG A 1 101 1 HG HG . 
C 3 SR A 1 102 1 SR SR . 
D 4 HOH A 1 201 8 HOH HOH . 
D 4 HOH A 2 202 6 HOH HOH . 
D 4 HOH A 3 203 28 HOH HOH . 
D 4 HOH A 4 204 31 HOH HOH . 
D 4 HOH A 5 205 41 HOH HOH . 
D 4 HOH A 6 206 24 HOH HOH . 
D 4 HOH A 7 207 13 HOH HOH . 
D 4 HOH A 8 208 17 HOH HOH . 
D 4 HOH A 9 209 18 HOH HOH . 
D 4 HOH A 10 210 20 HOH HOH . 
D 4 HOH A 11 211 10 HOH HOH . 
D 4 HOH A 12 212 5 HOH HOH . 
D 4 HOH A 13 213 7 HOH HOH . 
D 4 HOH A 14 214 22 HOH HOH . 
D 4 HOH A 15 215 14 HOH HOH . 
D 4 HOH A 16 216 30 HOH HOH . 
D 4 HOH A 17 217 9 HOH HOH . 
D 4 HOH A 18 218 11 HOH HOH . 
D 4 HOH A 19 219 32 HOH HOH . 
D 4 HOH A 20 220 12 HOH HOH . 
D 4 HOH A 21 221 15 HOH HOH . 
D 4 HOH A 22 222 2 HOH HOH . 
D 4 HOH A 23 223 19 HOH HOH . 
D 4 HOH A 24 224 39 HOH HOH . 
D 4 HOH A 25 225 1 HOH HOH . 
D 4 HOH A 26 226 3 HOH HOH . 
D 4 HOH A 27 227 4 HOH HOH . 
D 4 HOH A 28 228 26 HOH HOH . 
D 4 HOH A 29 229 44 HOH HOH . 
D 4 HOH A 30 230 16 HOH HOH . 
D 4 HOH A 31 231 38 HOH HOH . 
D 4 HOH A 32 232 27 HOH HOH . 
D 4 HOH A 33 233 29 HOH HOH . 
D 4 HOH A 34 234 23 HOH HOH . 
D 4 HOH A 35 235 25 HOH HOH . 
D 4 HOH A 36 236 21 HOH HOH . 
D 4 HOH A 37 237 35 HOH HOH . 
D 4 HOH A 38 238 33 HOH HOH . 
D 4 HOH A 39 239 36 HOH HOH . 
D 4 HOH A 40 240 42 HOH HOH . 
D 4 HOH A 41 241 37 HOH HOH . 
D 4 HOH A 42 242 40 HOH HOH . 
D 4 HOH A 43 243 43 HOH HOH . 
D 4 HOH A 44 244 34 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           HG 
_atom_site.label_atom_id         HG 
_atom_site.label_comp_id         HG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               12.924 
_atom_site.Cartn_y               5.399 
_atom_site.Cartn_z               0.656 
_atom_site.occupancy             0.6 
_atom_site.B_iso_or_equiv        17.71 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          HG 
_atom_site.auth_comp_id          HG 
_atom_site.auth_seq_id           101 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#