data_5GTD
#
_model_server_result.job_id            oQhkwoBL84Lj0fIANAyF7A 
_model_server_result.datetime_utc      '2024-10-14 06:22:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5gtd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":501}' 
#
_entry.id    5GTD 
#
_exptl.entry_id    5GTD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              35.453 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHLORIDE ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5GTD 
_cell.length_a            121.814 
_cell.length_b            121.814 
_cell.length_c            98.563 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5GTD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 G P AMP . A AMP 505 1_555 H O5 OSB . A OSB 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.595 ? 
covale ? covale2 L P AMP . B AMP 504 1_555 M O4 OSB . B OSB 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.596 ? 
metalc ? metalc1 B O PRO 8 B PRO 6 1_555 J MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? 
metalc ? metalc2 B OE1 GLN 13 B GLN 11 1_555 J MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? 
#
_chem_comp.formula           'Cl -1' 
_chem_comp.formula_weight    35.453 
_chem_comp.id                CL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHLORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5GTD 
_atom_sites.fract_transf_matrix[1][1]    0.008209 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008209 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010146 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CL A 1 501 2 CL CL . 
D 2 CL A 1 502 5 CL CL . 
E 2 CL A 1 503 6 CL CL . 
F 3 PEG A 1 504 1 PEG PEG . 
G 4 AMP A 1 505 500 AMP DRG . 
H 5 OSB A 1 506 500 OSB DRG . 
I 2 CL B 1 501 3 CL CL . 
J 6 MG B 1 502 2 MG MG . 
K 7 IMD B 1 503 1 IMD IMD . 
L 4 AMP B 1 504 500 AMP DRG . 
M 5 OSB B 1 505 500 OSB DRG . 
N 8 HOH A 1 601 18 HOH HOH . 
N 8 HOH A 2 602 17 HOH HOH . 
N 8 HOH A 3 603 11 HOH HOH . 
N 8 HOH A 4 604 7 HOH HOH . 
N 8 HOH A 5 605 8 HOH HOH . 
N 8 HOH A 6 606 36 HOH HOH . 
N 8 HOH A 7 607 10 HOH HOH . 
N 8 HOH A 8 608 6 HOH HOH . 
N 8 HOH A 9 609 12 HOH HOH . 
N 8 HOH A 10 610 51 HOH HOH . 
N 8 HOH A 11 611 22 HOH HOH . 
N 8 HOH A 12 612 20 HOH HOH . 
N 8 HOH A 13 613 14 HOH HOH . 
N 8 HOH A 14 614 43 HOH HOH . 
N 8 HOH A 15 615 47 HOH HOH . 
N 8 HOH A 16 616 40 HOH HOH . 
N 8 HOH A 17 617 25 HOH HOH . 
N 8 HOH A 18 618 48 HOH HOH . 
N 8 HOH A 19 619 53 HOH HOH . 
N 8 HOH A 20 620 54 HOH HOH . 
N 8 HOH A 21 621 33 HOH HOH . 
N 8 HOH A 22 622 1 HOH HOH . 
N 8 HOH A 23 623 35 HOH HOH . 
N 8 HOH A 24 624 49 HOH HOH . 
N 8 HOH A 25 625 9 HOH HOH . 
N 8 HOH A 26 626 38 HOH HOH . 
N 8 HOH A 27 627 13 HOH HOH . 
O 8 HOH B 1 601 28 HOH HOH . 
O 8 HOH B 2 602 21 HOH HOH . 
O 8 HOH B 3 603 2 HOH HOH . 
O 8 HOH B 4 604 39 HOH HOH . 
O 8 HOH B 5 605 3 HOH HOH . 
O 8 HOH B 6 606 44 HOH HOH . 
O 8 HOH B 7 607 5 HOH HOH . 
O 8 HOH B 8 608 4 HOH HOH . 
O 8 HOH B 9 609 50 HOH HOH . 
O 8 HOH B 10 610 24 HOH HOH . 
O 8 HOH B 11 611 46 HOH HOH . 
O 8 HOH B 12 612 15 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CL 
_atom_site.label_atom_id         CL 
_atom_site.label_comp_id         CL 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               46.113 
_atom_site.Cartn_y               -133.176 
_atom_site.Cartn_z               13.476 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        96.14 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CL 
_atom_site.auth_comp_id          CL 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#