data_5GU0 # _model_server_result.job_id rHGPGQVyVLNTX29emBIJ_g _model_server_result.datetime_utc '2024-11-12 20:43:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5gu0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":206}' # _entry.id 5GU0 # _exptl.entry_id 5GU0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 196.967 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GOLD ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5GU0 _cell.length_a 180.892 _cell.length_b 180.892 _cell.length_c 180.892 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GU0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 13 'crystal symmetry operation' 13_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 14 'crystal symmetry operation' 14_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 15 'crystal symmetry operation' 15_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 16 'crystal symmetry operation' 16_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 17 'crystal symmetry operation' 17_555 x,z,-y 1 0 0 0 0 1 0 -1 0 0 0 0 18 'crystal symmetry operation' 18_555 -x,z,y -1 0 0 0 0 1 0 1 0 0 0 0 19 'crystal symmetry operation' 19_555 -x,-z,-y -1 0 0 0 0 -1 0 -1 0 0 0 0 20 'crystal symmetry operation' 20_555 x,-z,y 1 0 0 0 0 -1 0 1 0 0 0 0 21 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 22 'crystal symmetry operation' 22_555 z,-y,x 0 0 1 0 -1 0 1 0 0 0 0 0 23 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 24 'crystal symmetry operation' 24_555 -z,-y,-x 0 0 -1 0 -1 0 -1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 48 X CYS 48 1_555 B AU AU . X AU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc2 A SG CYS 48 X CYS 48 1_555 C AU AU . X AU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc3 A ND1 HIS 49 X HIS 49 1_555 C AU AU . X AU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc4 A SG CYS 52 X CYS 52 1_555 B AU AU . X AU 201 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc5 A SG CYS 52 X CYS 52 1_555 D AU AU . X AU 203 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.991 ? metalc ? metalc6 A SG CYS 52 X CYS 52 1_555 D AU AU . X AU 203 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc7 A OE2 GLU 56 X GLU 56 1_555 L CD CD . X CD 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc8 A OE2 GLU 60 X GLU 60 1_555 L CD CD . X CD 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc9 A OD1 ASP 80 X ASP 80 1_555 J CD CD . X CD 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc10 A OD2 ASP 80 X ASP 80 1_555 J CD CD . X CD 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? metalc ? metalc11 A OD1 ASP 80 X ASP 80 1_555 J CD CD . X CD 209 72_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc12 A OD2 ASP 80 X ASP 80 1_555 J CD CD . X CD 209 72_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc13 A OE1 GLN 82 X GLN 82 1_555 J CD CD . X CD 209 51_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc14 A SD MET 96 X MET 96 1_555 G AU AU . X AU 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.891 ? metalc ? metalc15 A ND1 HIS 114 X HIS 114 1_555 E AU AU . X AU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc16 A SG CYS 126 X CYS 126 1_555 E AU AU . X AU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc17 A SG CYS 126 X CYS 126 1_555 F AU AU . X AU 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc18 A OE1 GLU 130 X GLU 130 1_555 K CD CD . X CD 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc19 A OE1 GLU 130 X GLU 130 1_555 K CD CD . X CD 210 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc20 A ND1 HIS 147 X HIS 147 1_555 G AU AU . X AU 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc21 A ND1 HIS 147 X HIS 147 1_555 H AU AU . X AU 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc22 A NE2 HIS 147 X HIS 147 1_555 I AU AU . X AU 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc23 D AU AU . X AU 203 1_555 Q O HOH . X HOH 375 22_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc24 F AU AU . X AU 205 1_555 Q O HOH . X HOH 364 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? # _chem_comp.formula 'Au 1' _chem_comp.formula_weight 196.967 _chem_comp.id AU _chem_comp.mon_nstd_flag . _chem_comp.name 'GOLD ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5GU0 _atom_sites.fract_transf_matrix[1][1] 0.005528 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005528 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005528 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AU X 1 201 1 AU AU . C 2 AU X 1 202 2 AU AU . D 2 AU X 1 203 3 AU AU . E 2 AU X 1 204 4 AU AU . F 2 AU X 1 205 5 AU AU . G 2 AU X 1 206 6 AU AU . H 2 AU X 1 207 7 AU AU . I 2 AU X 1 208 8 AU AU . J 3 CD X 1 209 1 CD CD . K 3 CD X 1 210 2 CD CD . L 3 CD X 1 211 3 CD CD . M 4 SO4 X 1 212 1 SO4 SO4 . N 4 SO4 X 1 213 2 SO4 SO4 . O 5 EDO X 1 214 1 EDO EDO . P 5 EDO X 1 215 2 EDO EDO . Q 6 HOH X 1 301 78 HOH HOH . Q 6 HOH X 2 302 77 HOH HOH . Q 6 HOH X 3 303 66 HOH HOH . Q 6 HOH X 4 304 73 HOH HOH . Q 6 HOH X 5 305 42 HOH HOH . Q 6 HOH X 6 306 51 HOH HOH . Q 6 HOH X 7 307 13 HOH HOH . Q 6 HOH X 8 308 45 HOH HOH . Q 6 HOH X 9 309 10 HOH HOH . Q 6 HOH X 10 310 54 HOH HOH . Q 6 HOH X 11 311 11 HOH HOH . Q 6 HOH X 12 312 23 HOH HOH . Q 6 HOH X 13 313 38 HOH HOH . Q 6 HOH X 14 314 17 HOH HOH . Q 6 HOH X 15 315 59 HOH HOH . Q 6 HOH X 16 316 60 HOH HOH . Q 6 HOH X 17 317 36 HOH HOH . Q 6 HOH X 18 318 6 HOH HOH . Q 6 HOH X 19 319 37 HOH HOH . Q 6 HOH X 20 320 32 HOH HOH . Q 6 HOH X 21 321 41 HOH HOH . Q 6 HOH X 22 322 58 HOH HOH . Q 6 HOH X 23 323 9 HOH HOH . Q 6 HOH X 24 324 1 HOH HOH . Q 6 HOH X 25 325 5 HOH HOH . Q 6 HOH X 26 326 55 HOH HOH . Q 6 HOH X 27 327 68 HOH HOH . Q 6 HOH X 28 328 16 HOH HOH . Q 6 HOH X 29 329 40 HOH HOH . Q 6 HOH X 30 330 46 HOH HOH . Q 6 HOH X 31 331 4 HOH HOH . Q 6 HOH X 32 332 76 HOH HOH . Q 6 HOH X 33 333 27 HOH HOH . Q 6 HOH X 34 334 18 HOH HOH . Q 6 HOH X 35 335 12 HOH HOH . Q 6 HOH X 36 336 74 HOH HOH . Q 6 HOH X 37 337 7 HOH HOH . Q 6 HOH X 38 338 15 HOH HOH . Q 6 HOH X 39 339 3 HOH HOH . Q 6 HOH X 40 340 22 HOH HOH . Q 6 HOH X 41 341 49 HOH HOH . Q 6 HOH X 42 342 72 HOH HOH . Q 6 HOH X 43 343 8 HOH HOH . Q 6 HOH X 44 344 50 HOH HOH . Q 6 HOH X 45 345 19 HOH HOH . Q 6 HOH X 46 346 26 HOH HOH . Q 6 HOH X 47 347 62 HOH HOH . Q 6 HOH X 48 348 21 HOH HOH . Q 6 HOH X 49 349 25 HOH HOH . Q 6 HOH X 50 350 20 HOH HOH . Q 6 HOH X 51 351 2 HOH HOH . Q 6 HOH X 52 352 14 HOH HOH . Q 6 HOH X 53 353 63 HOH HOH . Q 6 HOH X 54 354 52 HOH HOH . Q 6 HOH X 55 355 28 HOH HOH . Q 6 HOH X 56 356 69 HOH HOH . Q 6 HOH X 57 357 34 HOH HOH . Q 6 HOH X 58 358 39 HOH HOH . Q 6 HOH X 59 359 53 HOH HOH . Q 6 HOH X 60 360 35 HOH HOH . Q 6 HOH X 61 361 47 HOH HOH . Q 6 HOH X 62 362 31 HOH HOH . Q 6 HOH X 63 363 57 HOH HOH . Q 6 HOH X 64 364 67 HOH HOH . Q 6 HOH X 65 365 61 HOH HOH . Q 6 HOH X 66 366 71 HOH HOH . Q 6 HOH X 67 367 70 HOH HOH . Q 6 HOH X 68 368 64 HOH HOH . Q 6 HOH X 69 369 29 HOH HOH . Q 6 HOH X 70 370 44 HOH HOH . Q 6 HOH X 71 371 43 HOH HOH . Q 6 HOH X 72 372 48 HOH HOH . Q 6 HOH X 73 373 24 HOH HOH . Q 6 HOH X 74 374 33 HOH HOH . Q 6 HOH X 75 375 65 HOH HOH . Q 6 HOH X 76 376 56 HOH HOH . Q 6 HOH X 77 377 30 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol AU _atom_site.label_atom_id AU _atom_site.label_comp_id AU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 16.818 _atom_site.Cartn_y 6.702 _atom_site.Cartn_z 44.523 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 25.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id AU _atom_site.auth_comp_id AU _atom_site.auth_seq_id 206 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #