data_5GU3 # _model_server_result.job_id cOgqdggFH6Zv-WdgeBOaUw _model_server_result.datetime_utc '2024-11-18 02:57:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5gu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":208}' # _entry.id 5GU3 # _exptl.entry_id 5GU3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 196.967 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GOLD ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5GU3 _cell.length_a 181.502 _cell.length_b 181.502 _cell.length_c 181.502 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 13 'crystal symmetry operation' 13_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 14 'crystal symmetry operation' 14_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 15 'crystal symmetry operation' 15_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 16 'crystal symmetry operation' 16_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 17 'crystal symmetry operation' 17_555 x,z,-y 1 0 0 0 0 1 0 -1 0 0 0 0 18 'crystal symmetry operation' 18_555 -x,z,y -1 0 0 0 0 1 0 1 0 0 0 0 19 'crystal symmetry operation' 19_555 -x,-z,-y -1 0 0 0 0 -1 0 -1 0 0 0 0 20 'crystal symmetry operation' 20_555 x,-z,y 1 0 0 0 0 -1 0 1 0 0 0 0 21 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 22 'crystal symmetry operation' 22_555 z,-y,x 0 0 1 0 -1 0 1 0 0 0 0 0 23 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 24 'crystal symmetry operation' 24_555 -z,-y,-x 0 0 -1 0 -1 0 -1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 48 X CYS 48 1_555 D AU AU . X AU 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc2 A SG CYS 48 X CYS 48 1_555 E AU AU . X AU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc3 A SG CYS 52 X CYS 52 1_555 E AU AU . X AU 204 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc4 A OE2 GLU 56 X GLU 56 1_555 M CD CD . X CD 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc5 A OE1 GLU 60 X GLU 60 1_555 M CD CD . X CD 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc6 A OD1 ASP 80 X ASP 80 1_555 J CD CD . X CD 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc7 A OD2 ASP 80 X ASP 80 1_555 J CD CD . X CD 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc8 A OD1 ASP 80 X ASP 80 1_555 J CD CD . X CD 209 72_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc9 A OD2 ASP 80 X ASP 80 1_555 J CD CD . X CD 209 72_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc10 A OE1 GLN 82 X GLN 82 1_555 J CD CD . X CD 209 22_555 ? B ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc11 A NE2 HIS 114 X HIS 114 1_555 H AU AU . X AU 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? metalc ? metalc12 A OE2 GLU 130 X GLU 130 1_555 F AU AU . X AU 205 9_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? metalc ? metalc13 A OE1 GLU 130 X GLU 130 1_555 K CD CD . X CD 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc14 A OE1 GLU 130 X GLU 130 1_555 K CD CD . X CD 210 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? # _chem_comp.formula 'Au 1' _chem_comp.formula_weight 196.967 _chem_comp.id AU _chem_comp.mon_nstd_flag . _chem_comp.name 'GOLD ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5GU3 _atom_sites.fract_transf_matrix[1][1] 0.00551 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00551 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 X 1 201 1 SO4 SO4 . C 2 SO4 X 1 202 2 SO4 SO4 . D 3 AU X 1 203 1 AU AU . E 3 AU X 1 204 2 AU AU . F 3 AU X 1 205 3 AU AU . G 3 AU X 1 206 4 AU AU . H 3 AU X 1 207 5 AU AU . I 3 AU X 1 208 6 AU AU . J 4 CD X 1 209 1 CD CD . K 4 CD X 1 210 2 CD CD . L 4 CD X 1 211 3 CD CD . M 4 CD X 1 212 4 CD CD . N 4 CD X 1 213 5 CD CD . O 5 EDO X 1 214 1 EDO EDO . P 5 EDO X 1 215 2 EDO EDO . Q 5 EDO X 1 216 3 EDO EDO . R 6 HOH X 1 301 79 HOH HOH . R 6 HOH X 2 302 48 HOH HOH . R 6 HOH X 3 303 80 HOH HOH . R 6 HOH X 4 304 75 HOH HOH . R 6 HOH X 5 305 30 HOH HOH . R 6 HOH X 6 306 28 HOH HOH . R 6 HOH X 7 307 73 HOH HOH . R 6 HOH X 8 308 16 HOH HOH . R 6 HOH X 9 309 70 HOH HOH . R 6 HOH X 10 310 62 HOH HOH . R 6 HOH X 11 311 33 HOH HOH . R 6 HOH X 12 312 8 HOH HOH . R 6 HOH X 13 313 34 HOH HOH . R 6 HOH X 14 314 17 HOH HOH . R 6 HOH X 15 315 4 HOH HOH . R 6 HOH X 16 316 27 HOH HOH . R 6 HOH X 17 317 55 HOH HOH . R 6 HOH X 18 318 41 HOH HOH . R 6 HOH X 19 319 49 HOH HOH . R 6 HOH X 20 320 19 HOH HOH . R 6 HOH X 21 321 46 HOH HOH . R 6 HOH X 22 322 56 HOH HOH . R 6 HOH X 23 323 2 HOH HOH . R 6 HOH X 24 324 29 HOH HOH . R 6 HOH X 25 325 43 HOH HOH . R 6 HOH X 26 326 67 HOH HOH . R 6 HOH X 27 327 5 HOH HOH . R 6 HOH X 28 328 31 HOH HOH . R 6 HOH X 29 329 11 HOH HOH . R 6 HOH X 30 330 1 HOH HOH . R 6 HOH X 31 331 50 HOH HOH . R 6 HOH X 32 332 3 HOH HOH . R 6 HOH X 33 333 82 HOH HOH . R 6 HOH X 34 334 20 HOH HOH . R 6 HOH X 35 335 84 HOH HOH . R 6 HOH X 36 336 22 HOH HOH . R 6 HOH X 37 337 15 HOH HOH . R 6 HOH X 38 338 7 HOH HOH . R 6 HOH X 39 339 21 HOH HOH . R 6 HOH X 40 340 76 HOH HOH . R 6 HOH X 41 341 26 HOH HOH . R 6 HOH X 42 342 81 HOH HOH . R 6 HOH X 43 343 44 HOH HOH . R 6 HOH X 44 344 13 HOH HOH . R 6 HOH X 45 345 6 HOH HOH . R 6 HOH X 46 346 32 HOH HOH . R 6 HOH X 47 347 40 HOH HOH . R 6 HOH X 48 348 18 HOH HOH . R 6 HOH X 49 349 10 HOH HOH . R 6 HOH X 50 350 23 HOH HOH . R 6 HOH X 51 351 57 HOH HOH . R 6 HOH X 52 352 37 HOH HOH . R 6 HOH X 53 353 60 HOH HOH . R 6 HOH X 54 354 12 HOH HOH . R 6 HOH X 55 355 14 HOH HOH . R 6 HOH X 56 356 54 HOH HOH . R 6 HOH X 57 357 63 HOH HOH . R 6 HOH X 58 358 24 HOH HOH . R 6 HOH X 59 359 77 HOH HOH . R 6 HOH X 60 360 36 HOH HOH . R 6 HOH X 61 361 9 HOH HOH . R 6 HOH X 62 362 65 HOH HOH . R 6 HOH X 63 363 51 HOH HOH . R 6 HOH X 64 364 72 HOH HOH . R 6 HOH X 65 365 47 HOH HOH . R 6 HOH X 66 366 38 HOH HOH . R 6 HOH X 67 367 59 HOH HOH . R 6 HOH X 68 368 83 HOH HOH . R 6 HOH X 69 369 39 HOH HOH . R 6 HOH X 70 370 58 HOH HOH . R 6 HOH X 71 371 68 HOH HOH . R 6 HOH X 72 372 64 HOH HOH . R 6 HOH X 73 373 25 HOH HOH . R 6 HOH X 74 374 71 HOH HOH . R 6 HOH X 75 375 35 HOH HOH . R 6 HOH X 76 376 61 HOH HOH . R 6 HOH X 77 377 78 HOH HOH . R 6 HOH X 78 378 66 HOH HOH . R 6 HOH X 79 379 42 HOH HOH . R 6 HOH X 80 380 52 HOH HOH . R 6 HOH X 81 381 69 HOH HOH . R 6 HOH X 82 382 53 HOH HOH . R 6 HOH X 83 383 45 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol AU _atom_site.label_atom_id AU _atom_site.label_comp_id AU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x 34.754 _atom_site.Cartn_y 30.623 _atom_site.Cartn_z 31.985 _atom_site.occupancy 0.2 _atom_site.B_iso_or_equiv 91.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id AU _atom_site.auth_comp_id AU _atom_site.auth_seq_id 208 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #