data_5GU4
#
_model_server_result.job_id            NcOEUC54RRN90GkJiWR0LA 
_model_server_result.datetime_utc      '2024-10-19 12:31:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5gu4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    5GU4 
#
_exptl.entry_id    5GU4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.89 
_cell.angle_gamma         90 
_cell.entry_id            5GU4 
_cell.length_a            67.45 
_cell.length_b            59.88 
_cell.length_c            67.495 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5GU4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,F,H 1 1 
B,D,E,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5GU4 
_atom_sites.fract_transf_matrix[1][1]    0.014826 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002585 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0167 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015039 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 GOL B 1 301 1 GOL GOL . 
F 4 HOH A 1 301 231 HOH HOH . 
F 4 HOH A 2 302 209 HOH HOH . 
F 4 HOH A 3 303 232 HOH HOH . 
F 4 HOH A 4 304 131 HOH HOH . 
F 4 HOH A 5 305 50 HOH HOH . 
F 4 HOH A 6 306 147 HOH HOH . 
F 4 HOH A 7 307 219 HOH HOH . 
F 4 HOH A 8 308 105 HOH HOH . 
F 4 HOH A 9 309 129 HOH HOH . 
F 4 HOH A 10 310 208 HOH HOH . 
F 4 HOH A 11 311 36 HOH HOH . 
F 4 HOH A 12 312 168 HOH HOH . 
F 4 HOH A 13 313 9 HOH HOH . 
F 4 HOH A 14 314 217 HOH HOH . 
F 4 HOH A 15 315 13 HOH HOH . 
F 4 HOH A 16 316 171 HOH HOH . 
F 4 HOH A 17 317 183 HOH HOH . 
F 4 HOH A 18 318 5 HOH HOH . 
F 4 HOH A 19 319 101 HOH HOH . 
F 4 HOH A 20 320 46 HOH HOH . 
F 4 HOH A 21 321 143 HOH HOH . 
F 4 HOH A 22 322 7 HOH HOH . 
F 4 HOH A 23 323 90 HOH HOH . 
F 4 HOH A 24 324 223 HOH HOH . 
F 4 HOH A 25 325 15 HOH HOH . 
F 4 HOH A 26 326 49 HOH HOH . 
F 4 HOH A 27 327 137 HOH HOH . 
F 4 HOH A 28 328 166 HOH HOH . 
F 4 HOH A 29 329 66 HOH HOH . 
F 4 HOH A 30 330 89 HOH HOH . 
F 4 HOH A 31 331 23 HOH HOH . 
F 4 HOH A 32 332 3 HOH HOH . 
F 4 HOH A 33 333 123 HOH HOH . 
F 4 HOH A 34 334 10 HOH HOH . 
F 4 HOH A 35 335 72 HOH HOH . 
F 4 HOH A 36 336 19 HOH HOH . 
F 4 HOH A 37 337 199 HOH HOH . 
F 4 HOH A 38 338 88 HOH HOH . 
F 4 HOH A 39 339 1 HOH HOH . 
F 4 HOH A 40 340 45 HOH HOH . 
F 4 HOH A 41 341 116 HOH HOH . 
F 4 HOH A 42 342 78 HOH HOH . 
F 4 HOH A 43 343 163 HOH HOH . 
F 4 HOH A 44 344 33 HOH HOH . 
F 4 HOH A 45 345 179 HOH HOH . 
F 4 HOH A 46 346 68 HOH HOH . 
F 4 HOH A 47 347 189 HOH HOH . 
F 4 HOH A 48 348 93 HOH HOH . 
F 4 HOH A 49 349 27 HOH HOH . 
F 4 HOH A 50 350 84 HOH HOH . 
F 4 HOH A 51 351 148 HOH HOH . 
F 4 HOH A 52 352 233 HOH HOH . 
F 4 HOH A 53 353 111 HOH HOH . 
F 4 HOH A 54 354 190 HOH HOH . 
F 4 HOH A 55 355 106 HOH HOH . 
F 4 HOH A 56 356 145 HOH HOH . 
F 4 HOH A 57 357 142 HOH HOH . 
F 4 HOH A 58 358 61 HOH HOH . 
F 4 HOH A 59 359 32 HOH HOH . 
F 4 HOH A 60 360 21 HOH HOH . 
F 4 HOH A 61 361 151 HOH HOH . 
F 4 HOH A 62 362 133 HOH HOH . 
F 4 HOH A 63 363 6 HOH HOH . 
F 4 HOH A 64 364 81 HOH HOH . 
F 4 HOH A 65 365 97 HOH HOH . 
F 4 HOH A 66 366 44 HOH HOH . 
F 4 HOH A 67 367 167 HOH HOH . 
F 4 HOH A 68 368 206 HOH HOH . 
F 4 HOH A 69 369 25 HOH HOH . 
F 4 HOH A 70 370 220 HOH HOH . 
F 4 HOH A 71 371 176 HOH HOH . 
F 4 HOH A 72 372 91 HOH HOH . 
F 4 HOH A 73 373 100 HOH HOH . 
F 4 HOH A 74 374 119 HOH HOH . 
F 4 HOH A 75 375 141 HOH HOH . 
F 4 HOH A 76 376 211 HOH HOH . 
F 4 HOH A 77 377 110 HOH HOH . 
F 4 HOH A 78 378 96 HOH HOH . 
F 4 HOH A 79 379 77 HOH HOH . 
F 4 HOH A 80 380 138 HOH HOH . 
F 4 HOH A 81 381 162 HOH HOH . 
F 4 HOH A 82 382 117 HOH HOH . 
F 4 HOH A 83 383 29 HOH HOH . 
F 4 HOH A 84 384 83 HOH HOH . 
F 4 HOH A 85 385 47 HOH HOH . 
F 4 HOH A 86 386 60 HOH HOH . 
F 4 HOH A 87 387 22 HOH HOH . 
F 4 HOH A 88 388 222 HOH HOH . 
F 4 HOH A 89 389 56 HOH HOH . 
F 4 HOH A 90 390 140 HOH HOH . 
F 4 HOH A 91 391 112 HOH HOH . 
F 4 HOH A 92 392 215 HOH HOH . 
F 4 HOH A 93 393 181 HOH HOH . 
F 4 HOH A 94 394 225 HOH HOH . 
F 4 HOH A 95 395 156 HOH HOH . 
F 4 HOH A 96 396 227 HOH HOH . 
F 4 HOH A 97 397 57 HOH HOH . 
F 4 HOH A 98 398 126 HOH HOH . 
F 4 HOH A 99 399 202 HOH HOH . 
G 4 HOH B 1 401 104 HOH HOH . 
G 4 HOH B 2 402 224 HOH HOH . 
G 4 HOH B 3 403 54 HOH HOH . 
G 4 HOH B 4 404 86 HOH HOH . 
G 4 HOH B 5 405 204 HOH HOH . 
G 4 HOH B 6 406 63 HOH HOH . 
G 4 HOH B 7 407 107 HOH HOH . 
G 4 HOH B 8 408 92 HOH HOH . 
G 4 HOH B 9 409 169 HOH HOH . 
G 4 HOH B 10 410 230 HOH HOH . 
G 4 HOH B 11 411 197 HOH HOH . 
G 4 HOH B 12 412 4 HOH HOH . 
G 4 HOH B 13 413 115 HOH HOH . 
G 4 HOH B 14 414 113 HOH HOH . 
G 4 HOH B 15 415 87 HOH HOH . 
G 4 HOH B 16 416 99 HOH HOH . 
G 4 HOH B 17 417 8 HOH HOH . 
G 4 HOH B 18 418 17 HOH HOH . 
G 4 HOH B 19 419 76 HOH HOH . 
G 4 HOH B 20 420 14 HOH HOH . 
G 4 HOH B 21 421 152 HOH HOH . 
G 4 HOH B 22 422 108 HOH HOH . 
G 4 HOH B 23 423 12 HOH HOH . 
G 4 HOH B 24 424 158 HOH HOH . 
G 4 HOH B 25 425 120 HOH HOH . 
G 4 HOH B 26 426 221 HOH HOH . 
G 4 HOH B 27 427 173 HOH HOH . 
G 4 HOH B 28 428 30 HOH HOH . 
G 4 HOH B 29 429 52 HOH HOH . 
G 4 HOH B 30 430 103 HOH HOH . 
G 4 HOH B 31 431 73 HOH HOH . 
G 4 HOH B 32 432 82 HOH HOH . 
G 4 HOH B 33 433 18 HOH HOH . 
G 4 HOH B 34 434 40 HOH HOH . 
G 4 HOH B 35 435 2 HOH HOH . 
G 4 HOH B 36 436 172 HOH HOH . 
G 4 HOH B 37 437 201 HOH HOH . 
G 4 HOH B 38 438 59 HOH HOH . 
G 4 HOH B 39 439 95 HOH HOH . 
G 4 HOH B 40 440 70 HOH HOH . 
G 4 HOH B 41 441 26 HOH HOH . 
G 4 HOH B 42 442 125 HOH HOH . 
G 4 HOH B 43 443 53 HOH HOH . 
G 4 HOH B 44 444 20 HOH HOH . 
G 4 HOH B 45 445 48 HOH HOH . 
G 4 HOH B 46 446 203 HOH HOH . 
G 4 HOH B 47 447 41 HOH HOH . 
G 4 HOH B 48 448 98 HOH HOH . 
G 4 HOH B 49 449 16 HOH HOH . 
G 4 HOH B 50 450 188 HOH HOH . 
G 4 HOH B 51 451 55 HOH HOH . 
G 4 HOH B 52 452 69 HOH HOH . 
G 4 HOH B 53 453 11 HOH HOH . 
G 4 HOH B 54 454 213 HOH HOH . 
G 4 HOH B 55 455 65 HOH HOH . 
G 4 HOH B 56 456 182 HOH HOH . 
G 4 HOH B 57 457 31 HOH HOH . 
G 4 HOH B 58 458 155 HOH HOH . 
G 4 HOH B 59 459 160 HOH HOH . 
G 4 HOH B 60 460 24 HOH HOH . 
G 4 HOH B 61 461 79 HOH HOH . 
G 4 HOH B 62 462 130 HOH HOH . 
G 4 HOH B 63 463 114 HOH HOH . 
G 4 HOH B 64 464 234 HOH HOH . 
G 4 HOH B 65 465 207 HOH HOH . 
G 4 HOH B 66 466 136 HOH HOH . 
G 4 HOH B 67 467 150 HOH HOH . 
G 4 HOH B 68 468 200 HOH HOH . 
G 4 HOH B 69 469 74 HOH HOH . 
G 4 HOH B 70 470 42 HOH HOH . 
G 4 HOH B 71 471 85 HOH HOH . 
G 4 HOH B 72 472 38 HOH HOH . 
G 4 HOH B 73 473 194 HOH HOH . 
G 4 HOH B 74 474 174 HOH HOH . 
G 4 HOH B 75 475 146 HOH HOH . 
G 4 HOH B 76 476 164 HOH HOH . 
G 4 HOH B 77 477 192 HOH HOH . 
G 4 HOH B 78 478 80 HOH HOH . 
G 4 HOH B 79 479 67 HOH HOH . 
G 4 HOH B 80 480 128 HOH HOH . 
G 4 HOH B 81 481 175 HOH HOH . 
G 4 HOH B 82 482 58 HOH HOH . 
G 4 HOH B 83 483 191 HOH HOH . 
G 4 HOH B 84 484 43 HOH HOH . 
G 4 HOH B 85 485 34 HOH HOH . 
G 4 HOH B 86 486 187 HOH HOH . 
G 4 HOH B 87 487 180 HOH HOH . 
G 4 HOH B 88 488 37 HOH HOH . 
G 4 HOH B 89 489 193 HOH HOH . 
G 4 HOH B 90 490 124 HOH HOH . 
G 4 HOH B 91 491 35 HOH HOH . 
G 4 HOH B 92 492 170 HOH HOH . 
G 4 HOH B 93 493 39 HOH HOH . 
G 4 HOH B 94 494 51 HOH HOH . 
G 4 HOH B 95 495 178 HOH HOH . 
G 4 HOH B 96 496 64 HOH HOH . 
G 4 HOH B 97 497 102 HOH HOH . 
G 4 HOH B 98 498 149 HOH HOH . 
G 4 HOH B 99 499 226 HOH HOH . 
G 4 HOH B 100 500 177 HOH HOH . 
G 4 HOH B 101 501 228 HOH HOH . 
G 4 HOH B 102 502 71 HOH HOH . 
G 4 HOH B 103 503 122 HOH HOH . 
G 4 HOH B 104 504 229 HOH HOH . 
G 4 HOH B 105 505 212 HOH HOH . 
G 4 HOH B 106 506 196 HOH HOH . 
H 4 HOH C 1 101 109 HOH HOH . 
H 4 HOH C 2 102 153 HOH HOH . 
H 4 HOH C 3 103 62 HOH HOH . 
H 4 HOH C 4 104 28 HOH HOH . 
I 4 HOH D 1 101 75 HOH HOH . 
I 4 HOH D 2 102 210 HOH HOH . 
I 4 HOH D 3 103 94 HOH HOH . 
I 4 HOH D 4 104 135 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 45.305 15.233 3.142 1 30.84 ? C1 GOL 301 B 1 
HETATM 2 O O1 GOL . . . E 3 45.551 16.541 3.575 1 31.65 ? O1 GOL 301 B 1 
HETATM 3 C C2 GOL . . . E 3 46.705 14.608 2.882 1 25.57 ? C2 GOL 301 B 1 
HETATM 4 O O2 GOL . . . E 3 46.705 13.29 3.475 1 28.01 ? O2 GOL 301 B 1 
HETATM 5 C C3 GOL . . . E 3 46.886 14.437 1.351 1 27.46 ? C3 GOL 301 B 1 
HETATM 6 O O3 GOL . . . E 3 47.902 13.626 0.736 1 29.79 ? O3 GOL 301 B 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           35 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#