data_5GV2 # _model_server_result.job_id 8TdJqeFS-wL6uVF4qz0mWA _model_server_result.datetime_utc '2025-03-04 14:31:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5gv2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 5GV2 # _exptl.entry_id 5GV2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.21 _cell.angle_gamma 90 _cell.entry_id 5GV2 _cell.length_a 47.547 _cell.length_b 76.834 _cell.length_c 95.223 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GV2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5GV2 _atom_sites.fract_transf_matrix[1][1] 0.021032 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002287 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG C 1 501 1 MG MG . D 3 ARG A 1 401 401 ARG ARG . E 4 HOH C 1 601 22 HOH HOH . E 4 HOH C 2 602 11 HOH HOH . E 4 HOH C 3 603 52 HOH HOH . E 4 HOH C 4 604 51 HOH HOH . E 4 HOH C 5 605 104 HOH HOH . E 4 HOH C 6 606 31 HOH HOH . E 4 HOH C 7 607 39 HOH HOH . E 4 HOH C 8 608 14 HOH HOH . E 4 HOH C 9 609 9 HOH HOH . E 4 HOH C 10 610 105 HOH HOH . E 4 HOH C 11 611 64 HOH HOH . E 4 HOH C 12 612 85 HOH HOH . E 4 HOH C 13 613 13 HOH HOH . E 4 HOH C 14 614 88 HOH HOH . E 4 HOH C 15 615 35 HOH HOH . E 4 HOH C 16 616 131 HOH HOH . E 4 HOH C 17 617 78 HOH HOH . E 4 HOH C 18 618 21 HOH HOH . E 4 HOH C 19 619 138 HOH HOH . E 4 HOH C 20 620 137 HOH HOH . E 4 HOH C 21 621 46 HOH HOH . E 4 HOH C 22 622 41 HOH HOH . E 4 HOH C 23 623 96 HOH HOH . E 4 HOH C 24 624 44 HOH HOH . E 4 HOH C 25 625 8 HOH HOH . E 4 HOH C 26 626 20 HOH HOH . E 4 HOH C 27 627 19 HOH HOH . E 4 HOH C 28 628 24 HOH HOH . E 4 HOH C 29 629 50 HOH HOH . E 4 HOH C 30 630 127 HOH HOH . E 4 HOH C 31 631 79 HOH HOH . E 4 HOH C 32 632 80 HOH HOH . E 4 HOH C 33 633 34 HOH HOH . E 4 HOH C 34 634 28 HOH HOH . E 4 HOH C 35 635 3 HOH HOH . E 4 HOH C 36 636 118 HOH HOH . E 4 HOH C 37 637 23 HOH HOH . E 4 HOH C 38 638 61 HOH HOH . E 4 HOH C 39 639 15 HOH HOH . E 4 HOH C 40 640 102 HOH HOH . E 4 HOH C 41 641 43 HOH HOH . E 4 HOH C 42 642 49 HOH HOH . E 4 HOH C 43 643 62 HOH HOH . E 4 HOH C 44 644 60 HOH HOH . E 4 HOH C 45 645 75 HOH HOH . E 4 HOH C 46 646 42 HOH HOH . E 4 HOH C 47 647 106 HOH HOH . E 4 HOH C 48 648 86 HOH HOH . E 4 HOH C 49 649 57 HOH HOH . E 4 HOH C 50 650 71 HOH HOH . E 4 HOH C 51 651 87 HOH HOH . E 4 HOH C 52 652 84 HOH HOH . E 4 HOH C 53 653 145 HOH HOH . E 4 HOH C 54 654 82 HOH HOH . E 4 HOH C 55 655 129 HOH HOH . E 4 HOH C 56 656 37 HOH HOH . E 4 HOH C 57 657 5 HOH HOH . E 4 HOH C 58 658 144 HOH HOH . E 4 HOH C 59 659 68 HOH HOH . E 4 HOH C 60 660 139 HOH HOH . E 4 HOH C 61 661 63 HOH HOH . E 4 HOH C 62 662 143 HOH HOH . E 4 HOH C 63 663 2 HOH HOH . E 4 HOH C 64 664 83 HOH HOH . E 4 HOH C 65 665 114 HOH HOH . E 4 HOH C 66 666 38 HOH HOH . E 4 HOH C 67 667 117 HOH HOH . E 4 HOH C 68 668 29 HOH HOH . E 4 HOH C 69 669 99 HOH HOH . E 4 HOH C 70 670 128 HOH HOH . E 4 HOH C 71 671 56 HOH HOH . E 4 HOH C 72 672 125 HOH HOH . E 4 HOH C 73 673 121 HOH HOH . E 4 HOH C 74 674 115 HOH HOH . E 4 HOH C 75 675 130 HOH HOH . E 4 HOH C 76 676 100 HOH HOH . E 4 HOH C 77 677 126 HOH HOH . F 4 HOH A 1 501 108 HOH HOH . F 4 HOH A 2 502 17 HOH HOH . F 4 HOH A 3 503 111 HOH HOH . F 4 HOH A 4 504 109 HOH HOH . F 4 HOH A 5 505 69 HOH HOH . F 4 HOH A 6 506 77 HOH HOH . F 4 HOH A 7 507 81 HOH HOH . F 4 HOH A 8 508 119 HOH HOH . F 4 HOH A 9 509 1 HOH HOH . F 4 HOH A 10 510 74 HOH HOH . F 4 HOH A 11 511 54 HOH HOH . F 4 HOH A 12 512 92 HOH HOH . F 4 HOH A 13 513 148 HOH HOH . F 4 HOH A 14 514 94 HOH HOH . F 4 HOH A 15 515 112 HOH HOH . F 4 HOH A 16 516 65 HOH HOH . F 4 HOH A 17 517 76 HOH HOH . F 4 HOH A 18 518 32 HOH HOH . F 4 HOH A 19 519 12 HOH HOH . F 4 HOH A 20 520 53 HOH HOH . F 4 HOH A 21 521 110 HOH HOH . F 4 HOH A 22 522 55 HOH HOH . F 4 HOH A 23 523 27 HOH HOH . F 4 HOH A 24 524 30 HOH HOH . F 4 HOH A 25 525 113 HOH HOH . F 4 HOH A 26 526 25 HOH HOH . F 4 HOH A 27 527 72 HOH HOH . F 4 HOH A 28 528 147 HOH HOH . F 4 HOH A 29 529 107 HOH HOH . F 4 HOH A 30 530 120 HOH HOH . F 4 HOH A 31 531 7 HOH HOH . F 4 HOH A 32 532 70 HOH HOH . F 4 HOH A 33 533 98 HOH HOH . F 4 HOH A 34 534 59 HOH HOH . F 4 HOH A 35 535 40 HOH HOH . F 4 HOH A 36 536 89 HOH HOH . F 4 HOH A 37 537 73 HOH HOH . F 4 HOH A 38 538 6 HOH HOH . F 4 HOH A 39 539 18 HOH HOH . F 4 HOH A 40 540 95 HOH HOH . F 4 HOH A 41 541 142 HOH HOH . F 4 HOH A 42 542 58 HOH HOH . F 4 HOH A 43 543 103 HOH HOH . F 4 HOH A 44 544 45 HOH HOH . F 4 HOH A 45 545 146 HOH HOH . F 4 HOH A 46 546 33 HOH HOH . F 4 HOH A 47 547 48 HOH HOH . F 4 HOH A 48 548 26 HOH HOH . F 4 HOH A 49 549 36 HOH HOH . F 4 HOH A 50 550 116 HOH HOH . F 4 HOH A 51 551 122 HOH HOH . F 4 HOH A 52 552 4 HOH HOH . F 4 HOH A 53 553 16 HOH HOH . F 4 HOH A 54 554 90 HOH HOH . F 4 HOH A 55 555 134 HOH HOH . F 4 HOH A 56 556 123 HOH HOH . F 4 HOH A 57 557 66 HOH HOH . F 4 HOH A 58 558 91 HOH HOH . F 4 HOH A 59 559 93 HOH HOH . F 4 HOH A 60 560 97 HOH HOH . F 4 HOH A 61 561 47 HOH HOH . F 4 HOH A 62 562 10 HOH HOH . F 4 HOH A 63 563 133 HOH HOH . F 4 HOH A 64 564 135 HOH HOH . F 4 HOH A 65 565 101 HOH HOH . F 4 HOH A 66 566 124 HOH HOH . F 4 HOH A 67 567 140 HOH HOH . F 4 HOH A 68 568 149 HOH HOH . F 4 HOH A 69 569 136 HOH HOH . F 4 HOH A 70 570 141 HOH HOH . F 4 HOH A 71 571 132 HOH HOH . F 4 HOH A 72 572 67 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.435 _atom_site.Cartn_y -6.261 _atom_site.Cartn_z -24.55 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 368 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #