data_5GW6 # _model_server_result.job_id 6rXscGcUZhXh8vq0X7s2IQ _model_server_result.datetime_utc '2024-10-19 11:30:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5gw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 5GW6 # _exptl.entry_id 5GW6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5GW6 _cell.length_a 121.695 _cell.length_b 128.024 _cell.length_c 38.469 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GW6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 5GW6 _atom_sites.fract_transf_matrix[1][1] 0.008217 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007811 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025995 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 1 GOL GOL . C 2 GOL A 1 302 2 GOL GOL . D 2 GOL A 1 303 3 GOL GOL . E 3 HOH A 1 401 70 HOH HOH . E 3 HOH A 2 402 47 HOH HOH . E 3 HOH A 3 403 109 HOH HOH . E 3 HOH A 4 404 65 HOH HOH . E 3 HOH A 5 405 68 HOH HOH . E 3 HOH A 6 406 25 HOH HOH . E 3 HOH A 7 407 50 HOH HOH . E 3 HOH A 8 408 7 HOH HOH . E 3 HOH A 9 409 30 HOH HOH . E 3 HOH A 10 410 107 HOH HOH . E 3 HOH A 11 411 84 HOH HOH . E 3 HOH A 12 412 9 HOH HOH . E 3 HOH A 13 413 53 HOH HOH . E 3 HOH A 14 414 71 HOH HOH . E 3 HOH A 15 415 103 HOH HOH . E 3 HOH A 16 416 2 HOH HOH . E 3 HOH A 17 417 13 HOH HOH . E 3 HOH A 18 418 12 HOH HOH . E 3 HOH A 19 419 17 HOH HOH . E 3 HOH A 20 420 67 HOH HOH . E 3 HOH A 21 421 57 HOH HOH . E 3 HOH A 22 422 27 HOH HOH . E 3 HOH A 23 423 61 HOH HOH . E 3 HOH A 24 424 8 HOH HOH . E 3 HOH A 25 425 4 HOH HOH . E 3 HOH A 26 426 24 HOH HOH . E 3 HOH A 27 427 37 HOH HOH . E 3 HOH A 28 428 11 HOH HOH . E 3 HOH A 29 429 88 HOH HOH . E 3 HOH A 30 430 97 HOH HOH . E 3 HOH A 31 431 69 HOH HOH . E 3 HOH A 32 432 19 HOH HOH . E 3 HOH A 33 433 63 HOH HOH . E 3 HOH A 34 434 119 HOH HOH . E 3 HOH A 35 435 21 HOH HOH . E 3 HOH A 36 436 64 HOH HOH . E 3 HOH A 37 437 49 HOH HOH . E 3 HOH A 38 438 94 HOH HOH . E 3 HOH A 39 439 52 HOH HOH . E 3 HOH A 40 440 76 HOH HOH . E 3 HOH A 41 441 83 HOH HOH . E 3 HOH A 42 442 5 HOH HOH . E 3 HOH A 43 443 60 HOH HOH . E 3 HOH A 44 444 20 HOH HOH . E 3 HOH A 45 445 15 HOH HOH . E 3 HOH A 46 446 41 HOH HOH . E 3 HOH A 47 447 115 HOH HOH . E 3 HOH A 48 448 31 HOH HOH . E 3 HOH A 49 449 46 HOH HOH . E 3 HOH A 50 450 80 HOH HOH . E 3 HOH A 51 451 28 HOH HOH . E 3 HOH A 52 452 51 HOH HOH . E 3 HOH A 53 453 82 HOH HOH . E 3 HOH A 54 454 40 HOH HOH . E 3 HOH A 55 455 3 HOH HOH . E 3 HOH A 56 456 14 HOH HOH . E 3 HOH A 57 457 35 HOH HOH . E 3 HOH A 58 458 74 HOH HOH . E 3 HOH A 59 459 36 HOH HOH . E 3 HOH A 60 460 29 HOH HOH . E 3 HOH A 61 461 87 HOH HOH . E 3 HOH A 62 462 48 HOH HOH . E 3 HOH A 63 463 102 HOH HOH . E 3 HOH A 64 464 44 HOH HOH . E 3 HOH A 65 465 66 HOH HOH . E 3 HOH A 66 466 42 HOH HOH . E 3 HOH A 67 467 62 HOH HOH . E 3 HOH A 68 468 18 HOH HOH . E 3 HOH A 69 469 58 HOH HOH . E 3 HOH A 70 470 106 HOH HOH . E 3 HOH A 71 471 23 HOH HOH . E 3 HOH A 72 472 86 HOH HOH . E 3 HOH A 73 473 32 HOH HOH . E 3 HOH A 74 474 104 HOH HOH . E 3 HOH A 75 475 112 HOH HOH . E 3 HOH A 76 476 33 HOH HOH . E 3 HOH A 77 477 43 HOH HOH . E 3 HOH A 78 478 72 HOH HOH . E 3 HOH A 79 479 54 HOH HOH . E 3 HOH A 80 480 59 HOH HOH . E 3 HOH A 81 481 6 HOH HOH . E 3 HOH A 82 482 16 HOH HOH . E 3 HOH A 83 483 39 HOH HOH . E 3 HOH A 84 484 98 HOH HOH . E 3 HOH A 85 485 75 HOH HOH . E 3 HOH A 86 486 89 HOH HOH . E 3 HOH A 87 487 85 HOH HOH . E 3 HOH A 88 488 90 HOH HOH . E 3 HOH A 89 489 56 HOH HOH . E 3 HOH A 90 490 38 HOH HOH . E 3 HOH A 91 491 73 HOH HOH . E 3 HOH A 92 492 105 HOH HOH . E 3 HOH A 93 493 113 HOH HOH . E 3 HOH A 94 494 45 HOH HOH . E 3 HOH A 95 495 120 HOH HOH . E 3 HOH A 96 496 100 HOH HOH . E 3 HOH A 97 497 92 HOH HOH . E 3 HOH A 98 498 101 HOH HOH . E 3 HOH A 99 499 77 HOH HOH . E 3 HOH A 100 500 99 HOH HOH . E 3 HOH A 101 501 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 171.962 25.247 3.63 1 35.64 ? C1 GOL 303 A 1 HETATM 2 O O1 GOL . . . D 2 172.414 26.528 3.26 1 30.07 ? O1 GOL 303 A 1 HETATM 3 C C2 GOL . . . D 2 172.758 24.822 4.845 1 34.47 ? C2 GOL 303 A 1 HETATM 4 O O2 GOL . . . D 2 174.037 25.482 4.824 1 38.38 ? O2 GOL 303 A 1 HETATM 5 C C3 GOL . . . D 2 172.947 23.325 4.752 1 32.79 ? C3 GOL 303 A 1 HETATM 6 O O3 GOL . . . D 2 173.709 23.029 3.561 1 31.14 ? O3 GOL 303 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #