data_5GWP # _model_server_result.job_id 18vsl3F1IthBXpCam9AIGg _model_server_result.datetime_utc '2025-04-21 11:29:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5gwp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":301}' # _entry.id 5GWP # _exptl.entry_id 5GWP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 264.317 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5GWP _cell.length_a 74.981 _cell.length_b 133.684 _cell.length_c 191.279 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GWP _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,K,M,O 1 1 B,D,H,I,J,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 168 A CYS 226 1_555 A SG CYS 260 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 168 B CYS 226 1_555 B SG CYS 260 B CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 D SG CYS 18 D CYS 47 1_555 D SG CYS 143 D CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A OD2 ASP 60 A ASP 118 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc2 A OD1 ASP 60 A ASP 118 1_555 G MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc3 A O GLY 61 A GLY 119 1_555 G MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc4 A OD1 ASP 248 A ASP 306 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc5 A OD2 ASP 248 A ASP 306 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.966 ? metalc ? metalc6 A OD1 ASP 252 A ASP 310 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc7 A OD2 ASP 252 A ASP 310 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc8 A OD2 ASP 310 A ASP 368 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc9 E MG MG . A MG 401 1_555 M O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc10 E MG MG . A MG 401 1_555 M O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc11 E MG MG . A MG 401 1_555 M O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc12 F MG MG . A MG 402 1_555 M O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc13 G MG MG . A MG 403 1_555 M O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc14 G MG MG . A MG 403 1_555 M O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc15 G MG MG . A MG 403 1_555 M O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc16 G MG MG . A MG 403 1_555 M O HOH . A HOH 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc17 B OD2 ASP 60 B ASP 118 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc18 B OD1 ASP 60 B ASP 118 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc19 B O GLY 61 B GLY 119 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc20 B OD1 ASP 248 B ASP 306 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc21 B OD2 ASP 248 B ASP 306 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc22 B OD1 ASP 252 B ASP 310 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc23 B OD2 ASP 252 B ASP 310 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc24 B OD2 ASP 310 B ASP 368 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc25 H MG MG . B MG 401 1_555 N O HOH . B HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc26 H MG MG . B MG 401 1_555 N O HOH . B HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc27 H MG MG . B MG 401 1_555 N O HOH . B HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc28 I MG MG . B MG 402 1_555 N O HOH . B HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc29 I MG MG . B MG 402 1_555 N O HOH . B HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc30 J MG MG . B MG 403 1_555 N O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc31 J MG MG . B MG 403 1_555 N O HOH . B HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc32 J MG MG . B MG 403 1_555 N O HOH . B HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc33 J MG MG . B MG 403 1_555 N O HOH . B HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? # _chem_comp.formula 'C15 H20 O4' _chem_comp.formula_weight 264.317 _chem_comp.id A8S _chem_comp.mon_nstd_flag . _chem_comp.name '(2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(+)-abscisic acid;(2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl]-3-methyl-2,4-pentadienoic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O11 C1 A8S sing 1 n n O12 C1 A8S doub 2 z n C1 C2 A8S sing 3 n n C2 C3 A8S doub 4 n n C2 H2 A8S sing 5 n n C3 C4 A8S sing 6 e n C3 C6 A8S sing 7 n n C4 C5 A8S doub 8 n n C4 H4 A8S sing 9 n n C5 C7 A8S sing 10 n n C5 H5 A8S sing 11 n n C6 H6 A8S sing 12 n n C6 H6A A8S sing 13 n n C6 H6B A8S sing 14 n n O7 C7 A8S sing 15 n n C7 C12 A8S sing 16 n n C7 C8 A8S sing 17 n n O7 HO7 A8S sing 18 n n C8 C13 A8S sing 19 n n C8 C9 A8S doub 20 n n C9 C10 A8S sing 21 n n C9 H9 A8S sing 22 n n C11 C10 A8S sing 23 n n C10 O10 A8S doub 24 n n C12 C11 A8S sing 25 n n C11 H11 A8S sing 26 n n C11 H11A A8S sing 27 n n C15 C12 A8S sing 28 n n C14 C12 A8S sing 29 n n O11 HO11 A8S sing 30 n n C13 H13 A8S sing 31 n n C13 H13A A8S sing 32 n n C14 H14 A8S sing 33 n n C14 H14A A8S sing 34 n n C14 H14B A8S sing 35 n n C15 H15 A8S sing 36 n n C15 H15A A8S sing 37 n n C15 H15B A8S sing 38 n n C13 H13B A8S sing 39 n n # _atom_sites.entry_id 5GWP _atom_sites.fract_transf_matrix[1][1] 0.013337 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005228 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG A 1 401 3 MG MG . F 3 MG A 1 402 4 MG MG . G 3 MG A 1 403 8 MG MG . H 3 MG B 1 401 2 MG MG . I 3 MG B 1 402 5 MG MG . J 3 MG B 1 403 6 MG MG . K 4 A8S C 1 301 202 A8S A8S . L 4 A8S D 1 301 202 A8S A8S . M 5 HOH A 1 501 14 HOH HOH . M 5 HOH A 2 502 82 HOH HOH . M 5 HOH A 3 503 79 HOH HOH . M 5 HOH A 4 504 59 HOH HOH . M 5 HOH A 5 505 28 HOH HOH . M 5 HOH A 6 506 54 HOH HOH . M 5 HOH A 7 507 107 HOH HOH . M 5 HOH A 8 508 8 HOH HOH . M 5 HOH A 9 509 1 HOH HOH . M 5 HOH A 10 510 23 HOH HOH . M 5 HOH A 11 511 43 HOH HOH . M 5 HOH A 12 512 31 HOH HOH . M 5 HOH A 13 513 36 HOH HOH . M 5 HOH A 14 514 22 HOH HOH . M 5 HOH A 15 515 4 HOH HOH . M 5 HOH A 16 516 78 HOH HOH . M 5 HOH A 17 517 7 HOH HOH . M 5 HOH A 18 518 35 HOH HOH . M 5 HOH A 19 519 33 HOH HOH . M 5 HOH A 20 520 83 HOH HOH . M 5 HOH A 21 521 108 HOH HOH . M 5 HOH A 22 522 109 HOH HOH . M 5 HOH A 23 523 70 HOH HOH . M 5 HOH A 24 524 12 HOH HOH . M 5 HOH A 25 525 30 HOH HOH . M 5 HOH A 26 526 41 HOH HOH . M 5 HOH A 27 527 113 HOH HOH . M 5 HOH A 28 528 60 HOH HOH . M 5 HOH A 29 529 45 HOH HOH . M 5 HOH A 30 530 80 HOH HOH . M 5 HOH A 31 531 105 HOH HOH . N 5 HOH B 1 501 29 HOH HOH . N 5 HOH B 2 502 97 HOH HOH . N 5 HOH B 3 503 66 HOH HOH . N 5 HOH B 4 504 111 HOH HOH . N 5 HOH B 5 505 99 HOH HOH . N 5 HOH B 6 506 15 HOH HOH . N 5 HOH B 7 507 87 HOH HOH . N 5 HOH B 8 508 37 HOH HOH . N 5 HOH B 9 509 77 HOH HOH . N 5 HOH B 10 510 39 HOH HOH . N 5 HOH B 11 511 75 HOH HOH . N 5 HOH B 12 512 11 HOH HOH . N 5 HOH B 13 513 81 HOH HOH . N 5 HOH B 14 514 110 HOH HOH . N 5 HOH B 15 515 98 HOH HOH . N 5 HOH B 16 516 17 HOH HOH . N 5 HOH B 17 517 62 HOH HOH . N 5 HOH B 18 518 40 HOH HOH . N 5 HOH B 19 519 6 HOH HOH . N 5 HOH B 20 520 93 HOH HOH . N 5 HOH B 21 521 32 HOH HOH . N 5 HOH B 22 522 13 HOH HOH . N 5 HOH B 23 523 116 HOH HOH . N 5 HOH B 24 524 76 HOH HOH . N 5 HOH B 25 525 9 HOH HOH . N 5 HOH B 26 526 112 HOH HOH . N 5 HOH B 27 527 115 HOH HOH . O 5 HOH C 1 401 18 HOH HOH . O 5 HOH C 2 402 42 HOH HOH . O 5 HOH C 3 403 92 HOH HOH . O 5 HOH C 4 404 102 HOH HOH . O 5 HOH C 5 405 25 HOH HOH . O 5 HOH C 6 406 2 HOH HOH . O 5 HOH C 7 407 19 HOH HOH . O 5 HOH C 8 408 46 HOH HOH . O 5 HOH C 9 409 34 HOH HOH . O 5 HOH C 10 410 20 HOH HOH . O 5 HOH C 11 411 27 HOH HOH . O 5 HOH C 12 412 24 HOH HOH . O 5 HOH C 13 413 38 HOH HOH . O 5 HOH C 14 414 53 HOH HOH . O 5 HOH C 15 415 101 HOH HOH . P 5 HOH D 1 401 106 HOH HOH . P 5 HOH D 2 402 52 HOH HOH . P 5 HOH D 3 403 44 HOH HOH . P 5 HOH D 4 404 90 HOH HOH . P 5 HOH D 5 405 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A8S . . . L 4 -44.121 -27.598 -0.45 1 59.82 ? C1 A8S 301 D 1 HETATM 2 C C2 A8S . . . L 4 -44.512 -28.541 -1.574 1 55.14 ? C2 A8S 301 D 1 HETATM 3 C C3 A8S . . . L 4 -45.708 -28.564 -2.181 1 52.24 ? C3 A8S 301 D 1 HETATM 4 C C4 A8S . . . L 4 -46.792 -27.66 -1.817 1 47.08 ? C4 A8S 301 D 1 HETATM 5 C C5 A8S . . . L 4 -48.069 -27.917 -2.084 1 38.23 ? C5 A8S 301 D 1 HETATM 6 C C6 A8S . . . L 4 -45.946 -29.546 -3.27 1 50.64 ? C6 A8S 301 D 1 HETATM 7 C C7 A8S . . . L 4 -49.156 -26.973 -1.696 1 44.02 ? C7 A8S 301 D 1 HETATM 8 O O7 A8S . . . L 4 -48.8 -26.058 -0.7 1 44.64 ? O7 A8S 301 D 1 HETATM 9 C C8 A8S . . . L 4 -49.57 -26.159 -2.901 1 46.22 ? C8 A8S 301 D 1 HETATM 10 C C9 A8S . . . L 4 -50.536 -26.534 -3.733 1 48.94 ? C9 A8S 301 D 1 HETATM 11 C C10 A8S . . . L 4 -51.385 -27.689 -3.444 1 51.78 ? C10 A8S 301 D 1 HETATM 12 O O10 A8S . . . L 4 -52.361 -27.942 -4.133 1 58.97 ? O10 A8S 301 D 1 HETATM 13 C C11 A8S . . . L 4 -51.019 -28.556 -2.261 1 47.27 ? C11 A8S 301 D 1 HETATM 14 O O11 A8S . . . L 4 -44.93 -27.372 0.455 1 64.49 ? O11 A8S 301 D 1 HETATM 15 C C12 A8S . . . L 4 -50.353 -27.792 -1.106 1 47.18 ? C12 A8S 301 D 1 HETATM 16 O O12 A8S . . . L 4 -42.953 -27.095 -0.497 1 63.59 ? O12 A8S 301 D 1 HETATM 17 C C13 A8S . . . L 4 -48.904 -24.848 -3.087 1 44.75 ? C13 A8S 301 D 1 HETATM 18 C C14 A8S . . . L 4 -51.399 -26.893 -0.444 1 49.04 ? C14 A8S 301 D 1 HETATM 19 C C15 A8S . . . L 4 -49.882 -28.813 -0.083 1 46.33 ? C15 A8S 301 D 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 19 #