data_5GWP
#
_model_server_result.job_id            kg8pjuJLBojv8bsmHMjL-A 
_model_server_result.datetime_utc      '2024-10-19 04:40:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5gwp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":402}' 
#
_entry.id    5GWP 
#
_exptl.entry_id    5GWP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5GWP 
_cell.length_a            74.981 
_cell.length_b            133.684 
_cell.length_c            191.279 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5GWP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,K,M,O 1 1 
B,D,H,I,J,L,N,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 168 A CYS 226 1_555 A SG CYS 260 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 B SG CYS 168 B CYS 226 1_555 B SG CYS 260 B CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 D SG CYS 18 D CYS 47 1_555 D SG CYS 143 D CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc1 A OD2 ASP 60 A ASP 118 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc2 A OD1 ASP 60 A ASP 118 1_555 G MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc3 A O GLY 61 A GLY 119 1_555 G MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc4 A OD1 ASP 248 A ASP 306 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc5 A OD2 ASP 248 A ASP 306 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.966 ? 
metalc ? metalc6 A OD1 ASP 252 A ASP 310 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? 
metalc ? metalc7 A OD2 ASP 252 A ASP 310 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? 
metalc ? metalc8 A OD2 ASP 310 A ASP 368 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc9 E MG MG . A MG 401 1_555 M O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc10 E MG MG . A MG 401 1_555 M O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? 
metalc ? metalc11 E MG MG . A MG 401 1_555 M O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? 
metalc ? metalc12 F MG MG . A MG 402 1_555 M O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc13 G MG MG . A MG 403 1_555 M O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc14 G MG MG . A MG 403 1_555 M O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc15 G MG MG . A MG 403 1_555 M O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
metalc ? metalc16 G MG MG . A MG 403 1_555 M O HOH . A HOH 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc17 B OD2 ASP 60 B ASP 118 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc18 B OD1 ASP 60 B ASP 118 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc19 B O GLY 61 B GLY 119 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? 
metalc ? metalc20 B OD1 ASP 248 B ASP 306 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc21 B OD2 ASP 248 B ASP 306 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? 
metalc ? metalc22 B OD1 ASP 252 B ASP 310 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? 
metalc ? metalc23 B OD2 ASP 252 B ASP 310 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc24 B OD2 ASP 310 B ASP 368 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
metalc ? metalc25 H MG MG . B MG 401 1_555 N O HOH . B HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc26 H MG MG . B MG 401 1_555 N O HOH . B HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? 
metalc ? metalc27 H MG MG . B MG 401 1_555 N O HOH . B HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc28 I MG MG . B MG 402 1_555 N O HOH . B HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc29 I MG MG . B MG 402 1_555 N O HOH . B HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc30 J MG MG . B MG 403 1_555 N O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
metalc ? metalc31 J MG MG . B MG 403 1_555 N O HOH . B HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc32 J MG MG . B MG 403 1_555 N O HOH . B HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc33 J MG MG . B MG 403 1_555 N O HOH . B HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5GWP 
_atom_sites.fract_transf_matrix[1][1]    0.013337 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00748 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005228 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MG A 1 401 3 MG MG . 
F 3 MG A 1 402 4 MG MG . 
G 3 MG A 1 403 8 MG MG . 
H 3 MG B 1 401 2 MG MG . 
I 3 MG B 1 402 5 MG MG . 
J 3 MG B 1 403 6 MG MG . 
K 4 A8S C 1 301 202 A8S A8S . 
L 4 A8S D 1 301 202 A8S A8S . 
M 5 HOH A 1 501 14 HOH HOH . 
M 5 HOH A 2 502 82 HOH HOH . 
M 5 HOH A 3 503 79 HOH HOH . 
M 5 HOH A 4 504 59 HOH HOH . 
M 5 HOH A 5 505 28 HOH HOH . 
M 5 HOH A 6 506 54 HOH HOH . 
M 5 HOH A 7 507 107 HOH HOH . 
M 5 HOH A 8 508 8 HOH HOH . 
M 5 HOH A 9 509 1 HOH HOH . 
M 5 HOH A 10 510 23 HOH HOH . 
M 5 HOH A 11 511 43 HOH HOH . 
M 5 HOH A 12 512 31 HOH HOH . 
M 5 HOH A 13 513 36 HOH HOH . 
M 5 HOH A 14 514 22 HOH HOH . 
M 5 HOH A 15 515 4 HOH HOH . 
M 5 HOH A 16 516 78 HOH HOH . 
M 5 HOH A 17 517 7 HOH HOH . 
M 5 HOH A 18 518 35 HOH HOH . 
M 5 HOH A 19 519 33 HOH HOH . 
M 5 HOH A 20 520 83 HOH HOH . 
M 5 HOH A 21 521 108 HOH HOH . 
M 5 HOH A 22 522 109 HOH HOH . 
M 5 HOH A 23 523 70 HOH HOH . 
M 5 HOH A 24 524 12 HOH HOH . 
M 5 HOH A 25 525 30 HOH HOH . 
M 5 HOH A 26 526 41 HOH HOH . 
M 5 HOH A 27 527 113 HOH HOH . 
M 5 HOH A 28 528 60 HOH HOH . 
M 5 HOH A 29 529 45 HOH HOH . 
M 5 HOH A 30 530 80 HOH HOH . 
M 5 HOH A 31 531 105 HOH HOH . 
N 5 HOH B 1 501 29 HOH HOH . 
N 5 HOH B 2 502 97 HOH HOH . 
N 5 HOH B 3 503 66 HOH HOH . 
N 5 HOH B 4 504 111 HOH HOH . 
N 5 HOH B 5 505 99 HOH HOH . 
N 5 HOH B 6 506 15 HOH HOH . 
N 5 HOH B 7 507 87 HOH HOH . 
N 5 HOH B 8 508 37 HOH HOH . 
N 5 HOH B 9 509 77 HOH HOH . 
N 5 HOH B 10 510 39 HOH HOH . 
N 5 HOH B 11 511 75 HOH HOH . 
N 5 HOH B 12 512 11 HOH HOH . 
N 5 HOH B 13 513 81 HOH HOH . 
N 5 HOH B 14 514 110 HOH HOH . 
N 5 HOH B 15 515 98 HOH HOH . 
N 5 HOH B 16 516 17 HOH HOH . 
N 5 HOH B 17 517 62 HOH HOH . 
N 5 HOH B 18 518 40 HOH HOH . 
N 5 HOH B 19 519 6 HOH HOH . 
N 5 HOH B 20 520 93 HOH HOH . 
N 5 HOH B 21 521 32 HOH HOH . 
N 5 HOH B 22 522 13 HOH HOH . 
N 5 HOH B 23 523 116 HOH HOH . 
N 5 HOH B 24 524 76 HOH HOH . 
N 5 HOH B 25 525 9 HOH HOH . 
N 5 HOH B 26 526 112 HOH HOH . 
N 5 HOH B 27 527 115 HOH HOH . 
O 5 HOH C 1 401 18 HOH HOH . 
O 5 HOH C 2 402 42 HOH HOH . 
O 5 HOH C 3 403 92 HOH HOH . 
O 5 HOH C 4 404 102 HOH HOH . 
O 5 HOH C 5 405 25 HOH HOH . 
O 5 HOH C 6 406 2 HOH HOH . 
O 5 HOH C 7 407 19 HOH HOH . 
O 5 HOH C 8 408 46 HOH HOH . 
O 5 HOH C 9 409 34 HOH HOH . 
O 5 HOH C 10 410 20 HOH HOH . 
O 5 HOH C 11 411 27 HOH HOH . 
O 5 HOH C 12 412 24 HOH HOH . 
O 5 HOH C 13 413 38 HOH HOH . 
O 5 HOH C 14 414 53 HOH HOH . 
O 5 HOH C 15 415 101 HOH HOH . 
P 5 HOH D 1 401 106 HOH HOH . 
P 5 HOH D 2 402 52 HOH HOH . 
P 5 HOH D 3 403 44 HOH HOH . 
P 5 HOH D 4 404 90 HOH HOH . 
P 5 HOH D 5 405 89 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -64.472 
_atom_site.Cartn_y               -18.984 
_atom_site.Cartn_z               -12.809 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        40.76 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          20 
_model_server_stats.element_count           1 
#