data_5H20 # _model_server_result.job_id ojaq6KSevMGnBiSC_vQ6pQ _model_server_result.datetime_utc '2024-11-24 11:04:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5h20 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 5H20 # _exptl.entry_id 5H20 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5H20 _cell.length_a 72.89 _cell.length_b 72.89 _cell.length_c 84.141 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5H20 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 0 28.047 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GLC _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GLC sing 83 n n C1 O1 GLC sing 84 n n C1 O5 GLC sing 85 n n C1 H1 GLC sing 86 n n C2 C3 GLC sing 87 n n C2 O2 GLC sing 88 n n C2 H2 GLC sing 89 n n C3 C4 GLC sing 90 n n C3 O3 GLC sing 91 n n C3 H3 GLC sing 92 n n C4 C5 GLC sing 93 n n C4 O4 GLC sing 94 n n C4 H4 GLC sing 95 n n C5 C6 GLC sing 96 n n C5 O5 GLC sing 97 n n C5 H5 GLC sing 98 n n C6 O6 GLC sing 99 n n C6 H61 GLC sing 100 n n C6 H62 GLC sing 101 n n O1 HO1 GLC sing 102 n n O2 HO2 GLC sing 103 n n O3 HO3 GLC sing 104 n n O4 HO4 GLC sing 105 n n O6 HO6 GLC sing 106 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GLC a-D-glucopyranose 'COMMON NAME' GMML 1 GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 5H20 _atom_sites.fract_transf_matrix[1][1] 0.013719 _atom_sites.fract_transf_matrix[1][2] 0.007921 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015841 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011885 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 201 1 PO4 PO4 . C 2 PO4 A 1 202 2 PO4 PO4 . D 2 PO4 A 1 203 3 PO4 PO4 . E 3 GLC A 1 204 1 GLC GLC . F 4 IPA A 1 205 1 IPA IPA . G 4 IPA A 1 206 2 IPA IPA . H 5 HOH A 1 301 40 HOH HOH . H 5 HOH A 2 302 16 HOH HOH . H 5 HOH A 3 303 4 HOH HOH . H 5 HOH A 4 304 11 HOH HOH . H 5 HOH A 5 305 31 HOH HOH . H 5 HOH A 6 306 47 HOH HOH . H 5 HOH A 7 307 26 HOH HOH . H 5 HOH A 8 308 32 HOH HOH . H 5 HOH A 9 309 42 HOH HOH . H 5 HOH A 10 310 48 HOH HOH . H 5 HOH A 11 311 3 HOH HOH . H 5 HOH A 12 312 44 HOH HOH . H 5 HOH A 13 313 43 HOH HOH . H 5 HOH A 14 314 5 HOH HOH . H 5 HOH A 15 315 39 HOH HOH . H 5 HOH A 16 316 29 HOH HOH . H 5 HOH A 17 317 30 HOH HOH . H 5 HOH A 18 318 15 HOH HOH . H 5 HOH A 19 319 49 HOH HOH . H 5 HOH A 20 320 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GLC . . . E 3 32.362 -22.529 0.943 1 79.09 ? C1 GLC 204 A 1 HETATM 2 C C2 GLC . . . E 3 33.143 -21.222 0.8 1 79.07 ? C2 GLC 204 A 1 HETATM 3 C C3 GLC . . . E 3 32.299 -19.953 0.986 1 80.41 ? C3 GLC 204 A 1 HETATM 4 C C4 GLC . . . E 3 30.811 -20.082 0.644 1 85.7 ? C4 GLC 204 A 1 HETATM 5 C C5 GLC . . . E 3 30.16 -21.368 1.18 1 87.3 ? C5 GLC 204 A 1 HETATM 6 C C6 GLC . . . E 3 29.169 -21.942 0.163 1 87.31 ? C6 GLC 204 A 1 HETATM 7 O O1 GLC . . . E 3 33.186 -23.466 1.643 1 76.82 ? O1 GLC 204 A 1 HETATM 8 O O2 GLC . . . E 3 34.199 -21.201 1.766 1 74.53 ? O2 GLC 204 A 1 HETATM 9 O O3 GLC . . . E 3 32.868 -18.889 0.213 1 72.63 ? O3 GLC 204 A 1 HETATM 10 O O4 GLC . . . E 3 30.112 -18.96 1.202 1 89.28 ? O4 GLC 204 A 1 HETATM 11 O O5 GLC . . . E 3 31.11 -22.364 1.643 1 85.43 ? O5 GLC 204 A 1 HETATM 12 O O6 GLC . . . E 3 27.977 -21.143 0.154 1 89.94 ? O6 GLC 204 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #