data_5H23
#
_model_server_result.job_id            '_tiZFMqghJcRI3_p3jzu6w' 
_model_server_result.datetime_utc      '2025-07-14 11:33:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5h23 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":305}' 
#
_entry.id    5H23 
#
_exptl.entry_id    5H23 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              292.369 
_entity.id                          5 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         92.36 
_cell.angle_beta          91.18 
_cell.angle_gamma         103 
_cell.entry_id            5H23 
_cell.length_a            33.307 
_cell.length_b            39.096 
_cell.length_c            59.261 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5H23 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
PISA monomeric 1 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 
A,C,D,E,F,L 2 1 
B,G,H,I,J,K,M 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 K N N 
#
_chem_comp.formula           'C14 H28 O6' 
_chem_comp.formula_weight    292.369 
_chem_comp.id                BOG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'octyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 BOG sing 70 n n 
C1 C2 BOG sing 71 n n 
C1 O5 BOG sing 72 n n 
C1 H1 BOG sing 73 n n 
O1 C1' BOG sing 74 n n 
C2 O2 BOG sing 75 n n 
C2 C3 BOG sing 76 n n 
C2 H2 BOG sing 77 n n 
O2 HO2 BOG sing 78 n n 
C3 O3 BOG sing 79 n n 
C3 C4 BOG sing 80 n n 
C3 H3 BOG sing 81 n n 
O3 HO3 BOG sing 82 n n 
C4 O4 BOG sing 83 n n 
C4 C5 BOG sing 84 n n 
C4 H4 BOG sing 85 n n 
O4 HO4 BOG sing 86 n n 
C5 O5 BOG sing 87 n n 
C5 C6 BOG sing 88 n n 
C5 H5 BOG sing 89 n n 
C6 O6 BOG sing 90 n n 
C6 H61 BOG sing 91 n n 
C6 H62 BOG sing 92 n n 
O6 HO6 BOG sing 93 n n 
C1' C2' BOG sing 94 n n 
C1' "H1'1" BOG sing 95 n n 
C1' "H1'2" BOG sing 96 n n 
C2' C3' BOG sing 97 n n 
C2' "H2'1" BOG sing 98 n n 
C2' "H2'2" BOG sing 99 n n 
C3' C4' BOG sing 100 n n 
C3' "H3'1" BOG sing 101 n n 
C3' "H3'2" BOG sing 102 n n 
C4' C5' BOG sing 103 n n 
C4' "H4'1" BOG sing 104 n n 
C4' "H4'2" BOG sing 105 n n 
C5' C6' BOG sing 106 n n 
C5' "H5'1" BOG sing 107 n n 
C5' "H5'2" BOG sing 108 n n 
C6' C7' BOG sing 109 n n 
C6' "H6'1" BOG sing 110 n n 
C6' "H6'2" BOG sing 111 n n 
C7' C8' BOG sing 112 n n 
C7' "H7'1" BOG sing 113 n n 
C7' "H7'2" BOG sing 114 n n 
C8' "H8'1" BOG sing 115 n n 
C8' "H8'2" BOG sing 116 n n 
C8' "H8'3" BOG sing 117 n n 
#
_pdbx_chem_comp_identifier.comp_id            BOG 
_pdbx_chem_comp_identifier.identifier         b-octylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     5H23 
_atom_sites.fract_transf_matrix[1][1]    0.030024 
_atom_sites.fract_transf_matrix[1][2]    0.00693 
_atom_sites.fract_transf_matrix[1][3]    0.000944 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.026251 
_atom_sites.fract_transf_matrix[2][3]    0.001233 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016897 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 301 271 EDO EDO . 
D 3 PEG A 1 302 273 PEG PEG . 
E 4 GOL A 1 303 274 GOL GOL . 
F 5 BOG A 1 304 2001 BOG BOG . 
G 2 EDO B 1 301 271 EDO EDO . 
H 2 EDO B 1 302 272 EDO EDO . 
I 2 EDO B 1 303 273 EDO EDO . 
J 4 GOL B 1 304 275 GOL GOL . 
K 5 BOG B 1 305 2000 BOG BOG . 
L 6 HOH A 1 401 122 HOH HOH . 
L 6 HOH A 2 402 131 HOH HOH . 
L 6 HOH A 3 403 113 HOH HOH . 
L 6 HOH A 4 404 134 HOH HOH . 
L 6 HOH A 5 405 182 HOH HOH . 
L 6 HOH A 6 406 130 HOH HOH . 
L 6 HOH A 7 407 144 HOH HOH . 
L 6 HOH A 8 408 128 HOH HOH . 
L 6 HOH A 9 409 149 HOH HOH . 
L 6 HOH A 10 410 163 HOH HOH . 
L 6 HOH A 11 411 119 HOH HOH . 
L 6 HOH A 12 412 129 HOH HOH . 
L 6 HOH A 13 413 143 HOH HOH . 
L 6 HOH A 14 414 112 HOH HOH . 
L 6 HOH A 15 415 156 HOH HOH . 
L 6 HOH A 16 416 165 HOH HOH . 
L 6 HOH A 17 417 121 HOH HOH . 
L 6 HOH A 18 418 135 HOH HOH . 
L 6 HOH A 19 419 123 HOH HOH . 
L 6 HOH A 20 420 160 HOH HOH . 
L 6 HOH A 21 421 190 HOH HOH . 
L 6 HOH A 22 422 157 HOH HOH . 
L 6 HOH A 23 423 188 HOH HOH . 
L 6 HOH A 24 424 139 HOH HOH . 
L 6 HOH A 25 425 145 HOH HOH . 
L 6 HOH A 26 426 168 HOH HOH . 
L 6 HOH A 27 427 152 HOH HOH . 
L 6 HOH A 28 428 187 HOH HOH . 
L 6 HOH A 29 429 133 HOH HOH . 
L 6 HOH A 30 430 185 HOH HOH . 
L 6 HOH A 31 431 137 HOH HOH . 
L 6 HOH A 32 432 173 HOH HOH . 
L 6 HOH A 33 433 138 HOH HOH . 
L 6 HOH A 34 434 171 HOH HOH . 
L 6 HOH A 35 435 181 HOH HOH . 
L 6 HOH A 36 436 195 HOH HOH . 
L 6 HOH A 37 437 193 HOH HOH . 
L 6 HOH A 38 438 161 HOH HOH . 
L 6 HOH A 39 439 176 HOH HOH . 
L 6 HOH A 40 440 183 HOH HOH . 
L 6 HOH A 41 441 175 HOH HOH . 
L 6 HOH A 42 442 124 HOH HOH . 
L 6 HOH A 43 443 184 HOH HOH . 
L 6 HOH A 44 444 164 HOH HOH . 
L 6 HOH A 45 445 148 HOH HOH . 
L 6 HOH A 46 446 194 HOH HOH . 
L 6 HOH A 47 447 150 HOH HOH . 
L 6 HOH A 48 448 177 HOH HOH . 
M 6 HOH B 1 401 111 HOH HOH . 
M 6 HOH B 2 402 120 HOH HOH . 
M 6 HOH B 3 403 191 HOH HOH . 
M 6 HOH B 4 404 197 HOH HOH . 
M 6 HOH B 5 405 162 HOH HOH . 
M 6 HOH B 6 406 127 HOH HOH . 
M 6 HOH B 7 407 142 HOH HOH . 
M 6 HOH B 8 408 167 HOH HOH . 
M 6 HOH B 9 409 140 HOH HOH . 
M 6 HOH B 10 410 147 HOH HOH . 
M 6 HOH B 11 411 166 HOH HOH . 
M 6 HOH B 12 412 146 HOH HOH . 
M 6 HOH B 13 413 117 HOH HOH . 
M 6 HOH B 14 414 180 HOH HOH . 
M 6 HOH B 15 415 125 HOH HOH . 
M 6 HOH B 16 416 114 HOH HOH . 
M 6 HOH B 17 417 169 HOH HOH . 
M 6 HOH B 18 418 118 HOH HOH . 
M 6 HOH B 19 419 116 HOH HOH . 
M 6 HOH B 20 420 115 HOH HOH . 
M 6 HOH B 21 421 132 HOH HOH . 
M 6 HOH B 22 422 179 HOH HOH . 
M 6 HOH B 23 423 170 HOH HOH . 
M 6 HOH B 24 424 141 HOH HOH . 
M 6 HOH B 25 425 154 HOH HOH . 
M 6 HOH B 26 426 189 HOH HOH . 
M 6 HOH B 27 427 151 HOH HOH . 
M 6 HOH B 28 428 159 HOH HOH . 
M 6 HOH B 29 429 158 HOH HOH . 
M 6 HOH B 30 430 155 HOH HOH . 
M 6 HOH B 31 431 192 HOH HOH . 
M 6 HOH B 32 432 126 HOH HOH . 
M 6 HOH B 33 433 174 HOH HOH . 
M 6 HOH B 34 434 196 HOH HOH . 
M 6 HOH B 35 435 186 HOH HOH . 
M 6 HOH B 36 436 178 HOH HOH . 
M 6 HOH B 37 437 136 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BOG . . . K 5 -6.563 -14.56 -26.809 1 112.58 ? C1 BOG 305 B 1 
HETATM 2 O O1 BOG . . . K 5 -5.936 -15.779 -26.451 1 95.71 ? O1 BOG 305 B 1 
HETATM 3 C C2 BOG . . . K 5 -5.749 -13.82 -27.841 1 117.1 ? C2 BOG 305 B 1 
HETATM 4 O O2 BOG . . . K 5 -5.154 -12.707 -27.266 1 118.74 ? O2 BOG 305 B 1 
HETATM 5 C C3 BOG . . . K 5 -6.616 -13.358 -28.99 1 115.26 ? C3 BOG 305 B 1 
HETATM 6 O O3 BOG . . . K 5 -6.949 -14.445 -29.78 1 108.84 ? O3 BOG 305 B 1 
HETATM 7 C C4 BOG . . . K 5 -7.863 -12.699 -28.472 1 116.08 ? C4 BOG 305 B 1 
HETATM 8 O O4 BOG . . . K 5 -7.52 -11.506 -27.867 1 114.67 ? O4 BOG 305 B 1 
HETATM 9 C C5 BOG . . . K 5 -8.547 -13.577 -27.464 1 114.44 ? C5 BOG 305 B 1 
HETATM 10 O O5 BOG . . . K 5 -7.846 -14.771 -27.301 1 117.07 ? O5 BOG 305 B 1 
HETATM 11 C C6 BOG . . . K 5 -9.968 -13.822 -27.897 1 110.69 ? C6 BOG 305 B 1 
HETATM 12 O O6 BOG . . . K 5 -10.054 -14.918 -28.747 1 102.94 ? O6 BOG 305 B 1 
HETATM 13 C C1' BOG . . . K 5 -5.316 -15.931 -25.199 1 71.26 ? C1' BOG 305 B 1 
HETATM 14 C C2' BOG . . . K 5 -4.361 -17.111 -25.249 1 45.21 ? C2' BOG 305 B 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           257 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           14 
#